Structural Classification of Proteins

Superfamily: P-loop containing nucleoside triphosphate hydrolases

: division into families based on beta-sheet topologies
uperfamily

Lineage:

Root: scop
Class: Alpha and beta proteins (a/b) [51349]
Mainly parallel beta sheets (beta-alpha-beta units)
Fold: P-loop containing nucleoside triphosphate hydrolases [52539]
3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes
Superfamily: P-loop containing nucleoside triphosphate hydrolases [52540]
division into families based on beta-sheet topologies
uperfamily

Families:

Nucleotide and nucleoside kinases [52541] (46)
parallel beta-sheet of 5 strands, order 23145
1. Guanylate kinase [52542]
  1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [52543] (3)
    1. 1gky
      complexed with 5gp, so4
      1. chain a [31839]
    2. 1ex7
      complexed with 5gp, so4
      1. chain a [59537]
    3. 1ex6
      1. chain a [59535]
      2. chain b [59536]
  2. Mouse (Mus musculus) [TaxId: 10090] [82393] (1)
    1. 1lvg
      complexed with 5gp, adp, k
      1. chain a [78242]
  3. Escherichia coli [TaxId: 562] [102338] (18)
    1. 1s96
      complexed with po4, unx
      1. chain a [98740]
      2. chain b [98741]
    2. 2an9
      automatically matched to d1s96a_
      complexed with gdp, gmp, k
      1. region a:3-206 [127037]
    3. 2an9
      automatically matched to d1s96a_
      complexed with gdp, gmp, k
      1. region b:3-206 [127038]
    4. 2f3r
      automatically matched to d1s96a_
      complexed with g5p
      1. region a:3-206 [132890]
    5. 2f3r
      automatically matched to d1s96a_
      complexed with g5p
      1. region b:3-204 [132891]
    6. 2anb
      automatically matched to d1s96a_
      complexed with 5gp, so4
      1. region a:3-206 [127039]
    7. 2f3t
      automatically matched to d1s96a_
      complexed with lgp
      1. region a:3-206 [132893]
    8. 2f3t
      automatically matched to d1s96a_
      complexed with lgp
      1. region b:3-206 [132894]
    9. 2f3t
      automatically matched to d1s96a_
      complexed with lgp
      1. region c:3-206 [132895]
    10. 2f3t
      automatically matched to d1s96a_
      complexed with lgp
      1. region d:3-206 [132896]
    11. 2f3t
      automatically matched to d1s96a_
      complexed with lgp
      1. region e:3-205 [132897]
    12. 2f3t
      automatically matched to d1s96a_
      complexed with lgp
      1. region f:3-206 [132898]
    13. 2anc
      automatically matched to d1s96a_
      1. region a:3-206 [127040]
    14. 2anc
      automatically matched to d1s96a_
      1. region b:3-205 [127041]
    15. 2anc
      automatically matched to d1s96a_
      1. region c:3-206 [127042]
    16. 2anc
      automatically matched to d1s96a_
      1. region d:3-206 [127043]
    17. 2anc
      automatically matched to d1s96a_
      1. region e:3-205 [127044]
    18. 2anc
      automatically matched to d1s96a_
      1. region f:3-206 [127045]
  4. Mycobacterium tuberculosis [TaxId: 1773] [102339] (5)
    Rv1389
    1. 1znw
      automatically matched to d1s4qa_
      1. region a:20-201 [125412]
    2. 1s4q
      complexed with cl, fmt
      1. chain a [98507]
    3. 1zny
      automatically matched to d1s4qa_
      complexed with gdp
      1. region a:20-201 [125414]
    4. 1znx
      automatically matched to d1s4qa_
      complexed with 5gp
      1. region a:20-201 [125413]
    5. 1znz
      automatically matched to d1s4qa_
      complexed with gdp
      1. region a:20-201 [125415]
2. Guanylate kinase-like domain of Cask [69474]
  1. Human (Homo sapiens) [TaxId: 9606] [69475] (1)
    1. 1kgd
      complexed with fmt
      1. chain a [68582]
3. Guanylate kinase-like domain of Psd-95 [69476]
  1. Rat (Rattus norvegicus) [TaxId: 10116] [69477] (3)
    1. 1kjw
      complexed with so4
      1. region a:526-724 [68644]
    2. 1jxm
      complexed with 5gp, gai, mpd
      1. region a:526-724 [67421]
    3. 1jxo
      1. region a:526-720 [67423]
      2. region b:526-720 [67425]
4. Uridylate kinase [52544]
  1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [52545] (2)
    1. 1ukz
      complexed with adp, amp
      1. chain a [31840]
    2. 1uky
      complexed with adp
      1. chain a [31841]
5. Deoxynucleoside monophosphate kinase [52546]
  contains insert 4-helical bundle subdomain, residues 35-145
  1. Bacteriophage T4 [TaxId: 10665] [52547] (2)
    1. 1dek
      complexed with dgp, mg
      1. chain a [31842]
      2. chain b [31843]
    2. 1del
      complexed with amp, dgp, mg
      1. chain a [31844]
      2. chain b [31845]
6. Deoxyribonucleoside kinase [69478]
  1. Fruit fly (Drosophila melanogaster) [TaxId: 7227] [69479] (37)
    1. 2vp4
      automatically matched to d1oe0a_
      complexed with dcp
      1. region a:12-208 [153399]
    2. 2vp4
      automatically matched to d1oe0a_
      complexed with dcp
      1. region b:12-208 [153400]
    3. 2vp4
      automatically matched to d1oe0a_
      complexed with dcp
      1. region c:12-208 [153401]
    4. 2vp4
      automatically matched to d1oe0a_
      complexed with dcp
      1. region d:12-208 [153402]
    5. 1oe0
      complexed with mg, ttp; mutant
      1. chain a [92788]
      2. chain b [92789]
      3. chain c [92790]
      4. chain d [92791]
    6. 2vp0
      automatically matched to d1oe0a_
      complexed with mg, ttp
      1. region a:12-208 [153395]
    7. 2vp0
      automatically matched to d1oe0a_
      complexed with mg, ttp
      1. region b:12-208 [153396]
    8. 2vp5
      automatically matched to d1oe0a_
      complexed with dcz, so4
      1. region a:18-208 [153403]
    9. 2vp5
      automatically matched to d1oe0a_
      complexed with dcz, so4
      1. region b:18-208 [153404]
    10. 2vp2
      automatically matched to d1oe0a_
      complexed with dgt
      1. region a:12-208 [153397]
    11. 2vp2
      automatically matched to d1oe0a_
      complexed with dgt
      1. region b:12-208 [153398]
    12. 1ot3
      complexed with so4, thm
      1. chain a [87400]
      2. chain b [87401]
      3. chain c [87402]
      4. chain d [87403]
      5. chain e [87404]
      6. chain f [87405]
      7. chain g [87406]
      8. chain h [87407]
    13. 1j90
      CASP4
      complexed with dcz, so4; mutant
      1. chain a [66448]
      2. chain b [66449]
    14. 2jj8
      automatically matched to d1oe0a_
      complexed with azz, so4
      1. region a:12-208 [148129]
    15. 2jj8
      automatically matched to d1oe0a_
      complexed with azz, so4
      1. region b:12-208 [148130]
    16. 2jj8
      automatically matched to d1oe0a_
      complexed with azz, so4
      1. region c:12-208 [148131]
    17. 2jj8
      automatically matched to d1oe0a_
      complexed with azz, so4
      1. region d:12-208 [148132]
    18. 2vqs
      automatically matched to d1oe0a_
      complexed with bvd, so4
      1. region a:12-208 [153465]
    19. 2vqs
      automatically matched to d1oe0a_
      complexed with bvd, so4
      1. region b:12-208 [153466]
    20. 2vqs
      automatically matched to d1oe0a_
      complexed with bvd, so4
      1. region c:12-208 [153467]
    21. 2vqs
      automatically matched to d1oe0a_
      complexed with bvd, so4
      1. region d:12-208 [153468]
    22. 2vp9
      automatically matched to d1oe0a_
      complexed with doc, so4
      1. region a:12-208 [153413]
    23. 2vp9
      automatically matched to d1oe0a_
      complexed with doc, so4
      1. region b:12-208 [153414]
    24. 2vp9
      automatically matched to d1oe0a_
      complexed with doc, so4
      1. region c:12-208 [153415]
    25. 2vp9
      automatically matched to d1oe0a_
      complexed with doc, so4
      1. region d:12-208 [153416]
    26. 2vp9
      automatically matched to d1oe0a_
      complexed with doc, so4
      1. region e:12-208 [153417]
    27. 2vp9
      automatically matched to d1oe0a_
      complexed with doc, so4
      1. region f:12-208 [153418]
    28. 2vp9
      automatically matched to d1oe0a_
      complexed with doc, so4
      1. region g:12-208 [153419]
    29. 2vp9
      automatically matched to d1oe0a_
      complexed with doc, so4
      1. region h:12-208 [153420]
    30. 2vp6
      automatically matched to d1oe0a_
      complexed with 5fu, so4
      1. region a:12-208 [153405]
    31. 2vp6
      automatically matched to d1oe0a_
      complexed with 5fu, so4
      1. region b:12-208 [153406]
    32. 2vp6
      automatically matched to d1oe0a_
      complexed with 5fu, so4
      1. region c:12-208 [153407]
    33. 2vp6
      automatically matched to d1oe0a_
      complexed with 5fu, so4
      1. region d:12-208 [153408]
    34. 2vp6
      automatically matched to d1oe0a_
      complexed with 5fu, so4
      1. region e:12-208 [153409]
    35. 2vp6
      automatically matched to d1oe0a_
      complexed with 5fu, so4
      1. region f:12-208 [153410]
    36. 2vp6
      automatically matched to d1oe0a_
      complexed with 5fu, so4
      1. region g:12-208 [153411]
    37. 2vp6
      automatically matched to d1oe0a_
      complexed with 5fu, so4
      1. region h:12-208 [153412]
7. Deoxycytidine kinase [89657]
  1. Human (Homo sapiens) [TaxId: 9606] [89658] (13)
    1. 1p5z
      complexed with adp, ar3, mo3
      1. chain b [87815]
    2. 1p62
      complexed with adp, geo, mo3
      1. chain b [87819]
    3. 1p60
      complexed with adp, dcz
      1. chain a [87816]
      2. chain b [87817]
    4. 1p61
      complexed with adp, dcz
      1. chain b [87818]
    5. 2a7q
      automatically matched to d1p60a_
      complexed with adp, cfb, mg
      1. region a:20-260 [126352]
    6. 2qro
      automatically matched to d1p60a_
      complexed with d5m, mg, udp
      1. region a:20-260 [151301]
    7. 2qro
      automatically matched to d1p60a_
      complexed with d5m, mg, udp
      1. region b:20-260 [151302]
    8. 2qro
      automatically matched to d1p60a_
      complexed with d5m, mg, udp
      1. region c:20-260 [151303]
    9. 2qro
      automatically matched to d1p60a_
      complexed with d5m, mg, udp
      1. region d:20-260 [151304]
    10. 2qrn
      automatically matched to d1p60a_
      complexed with dcm, mg, udp
      1. region a:20-260 [151297]
    11. 2qrn
      automatically matched to d1p60a_
      complexed with dcm, mg, udp
      1. region b:20-260 [151298]
    12. 2qrn
      automatically matched to d1p60a_
      complexed with dcm, mg, udp
      1. region c:20-260 [151299]
    13. 2qrn
      automatically matched to d1p60a_
      complexed with dcm, mg, udp
      1. region d:20-260 [151300]
8. Deoxyguanosine kinase [69480]
  1. Human (Homo sapiens) [TaxId: 9606] [69481] (8)
    1. 2ocp
      automatically matched to d1jaga_
      complexed with dtp
      1. region a:37-277 [139012]
    2. 2ocp
      automatically matched to d1jaga_
      complexed with dtp
      1. region b:37-277 [139013]
    3. 2ocp
      automatically matched to d1jaga_
      complexed with dtp
      1. region c:37-277 [139014]
    4. 2ocp
      automatically matched to d1jaga_
      complexed with dtp
      1. region d:37-277 [139015]
    5. 2ocp
      automatically matched to d1jaga_
      complexed with dtp
      1. region e:37-277 [139016]
    6. 2ocp
      automatically matched to d1jaga_
      complexed with dtp
      1. region f:37-277 [139017]
    7. 2ocp
      automatically matched to d1jaga_
      complexed with dtp
      1. region g:37-277 [139018]
    8. 2ocp
      automatically matched to d1jaga_
      complexed with dtp
      1. region h:37-277 [139019]
9. CMP kinase [52548]
  1. Escherichia coli [TaxId: 562] [52549] (6)
    1. 1cke
      complexed with so4
      1. chain a [31846]
    2. 1kdo
      complexed with c, so4
      1. chain a [68478]
      2. chain b [68479]
    3. 1kdt
      complexed with doc, so4
      1. chain a [68484]
      2. chain b [68485]
    4. 2cmk
      complexed with cdp, so4
      1. chain a [31847]
    5. 1kdp
      complexed with c, so4
      1. chain a [68480]
      2. chain b [68481]
    6. 1kdr
      complexed with car, so4
      1. chain a [68482]
      2. chain b [68483]
  2. Streptococcus pneumoniae [TaxId: 1313] [110525] (1)
    SQ Q97PK6
    1. 1q3t
      1. chain a [104525]
10. UMP/CMP kinase [52550]
  1. Dictyostelium discoideum [TaxId: 44689] [52551] (6)
    1. 1qf9
      complexed with adp, alf, c5p, mg
      1. chain a [31848]
    2. 3ukd
      complexed with adp, af3, c5p, mg
      1. chain a [31849]
    3. 4ukd
      complexed with adp, bf2, mg, udp
      1. chain a [31850]
    4. 5ukd
      complexed with adp, af3, c5p, mg
      1. chain a [31851]
    5. 2ukd
      complexed with adp, c5p, mg
      1. chain a [31852]
    6. 1uke
      complexed with mg, up5
      1. chain a [31853]
  2. Human (Homo sapiens) [TaxId: 9606] [110526] (1)
    SQ P30085
    1. 1tev
      complexed with so4
      1. chain a [106817]
11. Thymidine kinase [52552]
  contains insert all-alpha subdomain, res. 251-322
  1. Herpes simplex virus type 1, different strains [TaxId: 10298] [52553] (22)
    SQ P03176 46-375
    1. 1e2k
      complexed with so4, tmc; mutant
      1. chain a [31854]
      2. chain b [31855]
    2. 1of1
      complexed with sct, so4
      1. chain a [103924]
      2. chain b [103925]
    3. 1e2h
      complexed with so4
      1. chain a [31856]
      2. chain b [31857]
    4. 1e2i
      complexed with aps, arp, so4
      1. chain a [31858]
      2. chain b [31859]
    5. 1e2n
      complexed with rca, so4
      1. chain a [59168]
      2. chain b [59169]
    6. 1qhi
      complexed with bpg, so4
      1. chain a [31860]
      2. chain b [31861]
    7. 1e2m
      complexed with hpt, so4
      1. chain a [59166]
      2. chain b [59167]
    8. 2ki5
      complexed with ac2, so4
      1. chain a [31862]
      2. chain b [31863]
    9. 1kim
      complexed with so4, thm
      1. chain a [31864]
      2. chain b [31865]
    10. 1p7c
      complexed with so4, t5a, thm
      1. chain a [94217]
      2. chain b [94218]
    11. 1e2p
      complexed with ccv, so4
      1. chain a [59170]
      2. chain b [59171]
    12. 1ki8
      complexed with bvd, so4
      1. chain a [31866]
      2. chain b [31867]
    13. 1e2l
      complexed with so4, tmc; mutant
      1. chain a [31872]
      2. chain b [31873]
    14. 1e2j
      complexed with so4, thm; mutant
      1. chain a [31874]
      2. chain b [31875]
    15. 1ki7
      complexed with id2, so4
      1. chain a [31868]
      2. chain b [31869]
    16. 1ki2
      complexed with ga2, so4
      1. chain a [31870]
      2. chain b [31871]
    17. 1ki6
      complexed with ahu, so4
      1. chain a [31876]
      2. chain b [31877]
    18. 1vtk
      complexed with adp, tmp
      1. chain a [31882]
    19. 1ki4
      complexed with btd, so4
      1. chain a [31878]
      2. chain b [31879]
    20. 2vtk
      complexed with adp, thm
      1. chain a [31883]
    21. 1ki3
      complexed with pe2, so4
      1. chain a [31880]
      2. chain b [31881]
    22. 3vtk
      complexed with 5iu, adp
      1. chain a [31884]
  2. Equine herpesvirus type 4 [TaxId: 10331] [102340] (4)
    1. 1p6x
      complexed with so4, thm
      1. chain a [94195]
      2. chain b [94196]
    2. 1p72
      complexed with adp, so4, thm
      1. chain a [94200]
      2. chain b [94201]
    3. 1p73
      complexed with 4ta, so4
      1. chain a [94202]
      2. chain b [94203]
      3. chain c [94204]
      4. chain d [94205]
    4. 1p75
      complexed with so4, t5a
      1. chain a [94210]
      2. chain b [94211]
      3. chain c [94212]
      4. chain d [94213]
  3. Varicella-zoster virus [TaxId: 10335] [89659] (1)
    1. 1osn
      complexed with adp, bvp
      1. chain a [87387]
      2. chain b [87388]
      3. chain c [87389]
      4. chain d [87390]
12. Adenylate kinase [52554]
  1. Pig (Sus scrofa) [TaxId: 9823] [52555] (1)
    1. 3adk
      complexed with so4
      1. chain a [31885]
  2. Archaeon Sulfolobus acidocaldarius [TaxId: 2285] [52556] (1)
    1. 1nks
      complexed with adp, amp
      1. chain a [31886]
      2. chain b [31887]
      3. chain c [31888]
      4. chain d [31889]
      5. chain e [31890]
      6. chain f [31891]
  3. Archaeon Methanococcus voltae [TaxId: 2188] [89660] (1)
    1. 1kht
      complexed with amp
      1. chain a [84401]
      2. chain b [84402]
      3. chain c [84403]
  4. Archaeon Methanococcus thermolithotrophicus [TaxId: 2186] [89661] (1)
    1. 1ki9
      1. chain a [84404]
      2. chain b [84405]
      3. chain c [84406]
  5. Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913] [52557] (1)
    contains a rudiment "zinc-finger" subdomain, residue 125-161
    1. 2ak3
      complexed with amp, so4
      1. region a:0-124,a:162-225 [31892]
      2. region b:0-124,b:162-220 [31893]
  6. Cow (Bos taurus), mitochondrial izozyme-2 [TaxId: 9913] [52558] (2)
    contains a rudiment "zinc-finger" subdomain, residue 147-176
    1. 1ak2
      complexed with so4
      1. region a:14-146,a:177-233 [31894]
    2. 2ak2
      complexed with so4
      1. region a:14-146,a:177-233 [31895]
  7. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [52559] (4)
    contains a rudiment "zinc-finger" subdomain, residue 131-168
    1. 1aky
      complexed with ap5, imd
      1. region a:3-130,a:169-220 [31896]
    2. 2aky
      complexed with ap5, mg
      1. region a:3-130,a:169-220 [31897]
    3. 3aky
      complexed with ap5, imd; mutant
      1. region a:3-130,a:169-220 [31898]
    4. 1dvr
      complexed with atf; mutant
      1. region a:1-130,a:169-220 [31899]
      2. region b:1-130,b:169-220 [31900]
  8. Escherichia coli [TaxId: 562] [52560] (6)
    contains a rudiment "zinc-finger" subdomain, residue 122-156
    1. 1e4v
      complexed with ap5; mutant
      1. region a:1-121,a:157-214 [31903]
      2. region b:1-121,b:157-214 [31904]
    2. 1e4y
      complexed with ap5; mutant
      1. region a:1-121,a:157-214 [31901]
      2. region b:1-121,b:157-214 [31902]
    3. 1ake
      complexed with ap5
      1. region a:1-121,a:157-214 [31905]
      2. region b:1-121,b:157-214 [31906]
    4. 1ank
      complexed with amp, anp
      1. region a:1-121,a:157-214 [31907]
      2. region b:1-121,b:157-214 [31908]
    5. 4ake
      1. region a:1-121,a:157-214 [31909]
      2. region b:1-121,b:157-214 [31910]
    6. 2eck
      complexed with adp, amp
      1. region a:1-121,a:157-214 [31911]
      2. region b:1-121,b:157-214 [31912]
  9. Maize (Zea mays) [TaxId: 4577] [52561] (1)
    1. 1zak
      contains a rudiment "zinc-finger" subdomain, residue 128-158
      complexed with ap5
      1. region a:3-127,a:159-222 [31913]
      2. region b:3-127,b:159-222 [31914]
  10. Bacillus stearothermophilus [TaxId: 1422] [52562] (3)
    contains a zinc-finger subdomain, residues 126-160
    1. 1zin
      complexed with ap5, zn
      1. region a:1-125,a:161-217 [31915]
    2. 1zip
      complexed with ap5, mn, zn
      1. region a:1-125,a:161-217 [31916]
    3. 1zio
      complexed with ap5, mg, zn
      1. region a:1-125,a:161-217 [31917]
  11. Bacillus subtilis [TaxId: 1423] [102341] (1)
    contains a zinc-finger subdomain, residues 126-160
    1. 1p3j
      complexed with ap5, mg, zn
      1. region a:1-125,a:161-212 [94022]
  12. Bacillus globisporus [TaxId: 1459] [102342] (1)
    contains a zinc-finger subdomain, residues 126-160
    1. 1s3g
      complexed with ap5, zn
      1. region a:1-125,a:161-217 [98433]
  13. Mycobacterium tuberculosis [TaxId: 1773] [102343] (2)
    contains no zinc finger-like insertion
    1. 2cdn
      automatically matched to d1p4sa_
      complexed with adp, mg
      1. region a:1-181 [130289]
    2. 1p4s
      1. chain a [94117]
  14. Human (Homo sapiens), isoenzyme 6 [TaxId: 9606] [117527] (1)
    SQ Q9Y3D8
    1. 1rkb
      complexed with li, so4
      1. chain a [111854]
13. Thymidylate kinase [52563]
  1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [52564] (3)
    1. 1tmk
      complexed with so4, tmp
      1. chain a [31918]
      2. chain b [31919]
    2. 3tmk
      complexed with t5a
      1. chain a [31920]
      2. chain b [31921]
      3. chain c [31922]
      4. chain d [31923]
      5. chain e [31924]
      6. chain f [31925]
      7. chain g [31926]
      8. chain h [31927]
    3. 2tmk
      complexed with atm, so4
      1. chain a [31928]
      2. chain b [31929]
  2. Human (Homo sapiens) [TaxId: 9606] [64010] (20)
    1. 1nn5
      complexed with 2dt, anp, mg; mutant
      1. chain a [85892]
    2. 1nmy
      complexed with adp, anp, fdm, mg; mutant
      1. chain a [85883]
    3. 1e9e
      complexed with adp, mg, tmp; mutant
      1. chain a [64810]
    4. 1nn3
      complexed with 2dt, adp, mg; mutant
      1. chain a [85887]
    5. 1e9a
      complexed with mg, z5a; mutant
      1. chain a [64806]
    6. 1e9c
      complexed with adp, anp, mg, tmp; mutant
      1. chain a [64808]
    7. 1e9b
      complexed with adp, anp, atm, mg; mutant
      1. chain a [64807]
    8. 1e2d
      complexed with adp, mg, tmp; mutant
      1. chain a [59162]
    9. 1e2f
      complexed with adp, anp, mg, tmp; mutant
      1. chain a [59164]
    10. 1nmx
      complexed with adp, fdm, mg; mutant
      1. chain a [85882]
    11. 1nn0
      complexed with 2dt, adp, mg; mutant
      1. chain a [85885]
    12. 1e2q
      complexed with atp, mg, tmp; mutant
      1. chain a [59172]
    13. 1e2g
      complexed with adp, mg, tmp, tyd; mutant
      1. chain a [59165]
    14. 1nmz
      complexed with anp, mg, nym; mutant
      1. chain a [85884]
    15. 1e9d
      complexed with adp, atm, mg; mutant
      1. chain a [64809]
    16. 1e99
      complexed with adp, atm, mg; mutant
      1. chain a [64805]
    17. 1nn1
      complexed with 2dt, anp, mg; mutant
      1. chain a [85886]
    18. 1e98
      complexed with adp, atm, mg; mutant
      1. chain a [64804]
    19. 1e2e
      complexed with adp, af3, mg, tmp; mutant
      1. chain a [59163]
    20. 1e9f
      complexed with adp, mg, tmp; mutant
      1. chain a [64811]
  3. Escherichia coli [TaxId: 562] [52565] (2)
    1. 4tmk
      complexed with t5a
      1. chain a [31930]
    2. 5tmp
      complexed with z5a
      1. chain a [31931]
  4. Mycobacterium tuberculosis [TaxId: 1773] [69482] (13)
    1. 1gsi
      complexed with act, mg, so4, tmp
      1. chain a [70396]
    2. 1gtv
      complexed with act, mg, so4, tmp, tyd
      1. chain a [70537]
      2. chain b [70538]
    3. 1n5i
      complexed with atp, flc, so4, tmp
      1. chain a [85330]
    4. 1n5j
      complexed with mg, so4, ttp, tyd
      1. chain a [85331]
    5. 1g3u
      complexed with mg, sul, tmp
      1. chain a [65132]
    6. 1n5k
      complexed with act, mg, tmp
      1. chain a [85332]
      2. chain b [85333]
    7. 1w2g
      automatically matched to d1g3ua_
      complexed with act, thm
      1. region a:1-208 [120580]
    8. 1w2g
      automatically matched to d1g3ua_
      complexed with act, thm
      1. region b:1-208 [120581]
    9. 1mrs
      complexed with 5hu, mg, so4
      1. chain a [79424]
    10. 1w2h
      automatically matched to d1g3ua_
      complexed with act, atm
      1. region a:1-208 [120582]
    11. 1w2h
      automatically matched to d1g3ua_
      complexed with act, atm
      1. region b:1-208 [120583]
    12. 1n5l
      complexed with act, dpo, mg, tmp, tyd
      1. chain a [85334]
      2. chain b [85335]
    13. 1mrn
      complexed with mg, so4, t5a
      1. chain a [79423]
14. Dephospho-CoA kinase [75187]
  1. Haemophilus influenzae [TaxId: 727] [75188] (1)
    1. 1jjv
      complexed with atp, hg, so4
      1. chain a [71698]
  2. Escherichia coli [TaxId: 562] [82394] (5)
    1. 1vht
      structural genomics
      complexed with act, ba3
      1. chain a [100700]
      2. chain b [100701]
      3. chain c [100702]
    2. 1vhl
      structural genomics
      complexed with act, adp
      1. chain a [100688]
      2. chain b [100689]
      3. chain c [100690]
    3. 1n3b
      complexed with mse, so4
      1. chain a [79959]
      2. chain b [79960]
      3. chain c [79961]
    4. 1viy
      structural genomics
      complexed with so4
      1. chain a [100781]
      2. chain b [100782]
      3. chain c [100783]
    5. 1t3h
      structural genomics; NESG target ER57
      complexed with so4
      1. chain a [99117]
      2. chain b [99118]
      3. chain c [99119]
  3. Thermus thermophilus [TaxId: 274] [102344] (1)
    TT1252
    1. 1uf9
      structural genomics
      complexed with atp, po4
      1. chain a [99326]
      2. chain b [99327]
      3. chain c [99328]
15. Transcriptional regulator NadR, ribosylnicotinamide kinase domain [75189]
  1. Haemophilus influenzae [TaxId: 727] [75190] (1)
    1. 1lw7
      complexed with mse, nad, so4
      1. region a:220-411 [74296]
16. Polynucleotide kinase, kinase domain [75191]
  1. Bacteriophage T4 [TaxId: 10665] [75192] (17)
    1. 1ly1
      complexed with so4
      1. chain a [74334]
    2. 1ltq
      complexed with adp, dms, mse
      1. region a:1-152 [78209]
    3. 1rrc
      complexed with adp, ca, dms
      1. region a:1-152 [97790]
    4. 1rc8
      complexed with adp, ca, dms
      1. region a:1-152 [97292]
    5. 2ia5
      automatically matched to d1ltqa2
      complexed with ars, mg, so4
      1. region a:1-152 [137134]
    6. 2ia5
      automatically matched to d1ltqa2
      complexed with ars, mg, so4
      1. region b:1-152 [137136]
    7. 2ia5
      automatically matched to d1ltqa2
      complexed with ars, mg, so4
      1. region c:1-152 [137138]
    8. 2ia5
      automatically matched to d1ltqa2
      complexed with ars, mg, so4
      1. region d:1-152 [137140]
    9. 2ia5
      automatically matched to d1ltqa2
      complexed with ars, mg, so4
      1. region e:1-152 [137142]
    10. 2ia5
      automatically matched to d1ltqa2
      complexed with ars, mg, so4
      1. region f:1-152 [137144]
    11. 2ia5
      automatically matched to d1ltqa2
      complexed with ars, mg, so4
      1. region g:3-152 [137146]
    12. 2ia5
      automatically matched to d1ltqa2
      complexed with ars, mg, so4
      1. region h:1-152 [137148]
    13. 2ia5
      automatically matched to d1ltqa2
      complexed with ars, mg, so4
      1. region i:1-152 [137150]
    14. 2ia5
      automatically matched to d1ltqa2
      complexed with ars, mg, so4
      1. region j:1-152 [137152]
    15. 2ia5
      automatically matched to d1ltqa2
      complexed with ars, mg, so4
      1. region k:1-152 [137154]
    16. 2ia5
      automatically matched to d1ltqa2
      complexed with ars, mg, so4
      1. region l:1-152 [137156]
    17. 1rpz
      complexed with adp, ca, dms
      1. region a:1-152 [97721]
17. Guanylate kinase-like domain of the L-type calcium channel [110527]
  1. Rabbit (Oryctolagus cuniculus) [TaxId: 9986] [110528] (4)
    SQ P54288 234-451
    1. 1t0h
      complexed with cl
      1. chain b [106208]
    2. 1t0j
      complexed with cl
      1. chain b [106212]
    3. 1t3l
      mutant
      1. region a:218-415 [106359]
    4. 1t3s
      complexed with hg; mutant
      1. region a:218-415 [106380]
  2. Rat (Rattus norvegicus) [TaxId: 10116] [110529] (3)
    SQ P54287 38-362
    1. 1vyu
      1. region a:175-361 [108915]
      2. region b:175-361 [108917]
    2. 1vyt
      1. region a:175-361 [108909]
      2. region b:175-361 [108911]
    3. 1vyv
      beta4 isoform with odd numbering
      1. region a:216-402 [108919]
      2. region b:216-402 [108921]
18. Probable kinase LmjF30.1890 [117528]
  1. Leishmania major [TaxId: 5664] [117529] (1)
    SQ Q4Q7A6
    1. 1y63
      Structural genomics target
      complexed with adp, br, mn, na
      1. chain a [116494]
19. Hypothetical protein YorR [142211]
  1. Bacillus subtilis [TaxId: 1423] [142212] (2)
    SQ O31896 2-165
    1. 2axp
      1. region a:2-165 [127497]
    2. 2axp
      automatically matched to 2AXP A:2-165
      1. region b:2-165 [127498]
20. 5' polynucleotide kinase-3' phosphatase, C-terminal domain [142213]
  1. Mouse (Mus musculus) [TaxId: 10090] [142214] (2)
    SQ Q9JLV6 351-522
    1. 1yj5
      complexed with so4
      1. region a:351-522 [123381]
    2. 1yj5
      automatically matched to 1YJ5 A:351-522
      complexed with so4
      1. region b:351-522 [123383]
Shikimate kinase (AroK) [52566] (4)
similar to the nucleotide/nucleoside kinases but acts on different substrate
1. Shikimate kinase (AroK) [52567]
  1. Escherichia coli [TaxId: 562] [75193] (1)
    1. 1kag
      1. chain a [72249]
      2. chain b [72250]
  2. Erwinia chrysanthemi [TaxId: 556] [52568] (3)
    1. 1e6c
      complexed with cl, mpd, po4; mutant
      1. chain a [59296]
      2. chain b [59297]
    2. 1shk
      complexed with mg
      1. chain a [31932]
      2. chain b [31933]
    3. 2shk
      complexed with adp, mg
      1. chain a [31934]
      2. chain b [31935]
  3. Mycobacterium tuberculosis [TaxId: 1773] [75194] (24)
    SQ P95014
    1. 2iyv
      automatically matched to d1l4ua_
      complexed with adp, cl
      1. region a:2-166 [137812]
    2. 2iys
      automatically matched to d1l4ua_
      complexed with cl, skm
      1. region a:2-166 [137809]
    3. 2iyx
      automatically matched to d1l4ua_
      complexed with cl, mg, skm, so4
      1. region a:2-166 [137814]
    4. 2iyt
      automatically matched to d1l4ua_
      complexed with cl
      1. region a:2-166 [137810]
    5. 2iyy
      automatically matched to d1l4ua_
      complexed with cl, mg, po4, s3p, so4
      1. region a:2-166 [137815]
    6. 2iyw
      automatically matched to d1l4ua_
      complexed with atp, mg
      1. region a:2-166 [137813]
    7. 2g1k
      automatically matched to d1l4ua_
      complexed with cl, skm, so4
      1. region a:2-166 [134519]
    8. 2iyq
      automatically matched to d1l4ua_
      complexed with adp, cl, skm, trs
      1. region a:2-166 [137806]
    9. 1l4u
      complexed with adp, cl, epe, mg, pt
      1. chain a [73568]
    10. 1l4y
      complexed with adp, cl, mg
      1. chain a [73571]
    11. 2iyr
      automatically matched to d1l4ua_
      complexed with skm
      1. region a:2-166 [137807]
    12. 2iyr
      automatically matched to d1l4ua_
      complexed with skm
      1. region b:2-166 [137808]
    13. 2iyu
      automatically matched to d1l4ua_
      complexed with adp, cl
      1. region a:2-166 [137811]
    14. 2g1j
      automatically matched to d1l4ua_
      complexed with so4
      1. region a:2-166 [134517]
    15. 2g1j
      automatically matched to d1l4ua_
      complexed with so4
      1. region b:2-166 [134518]
    16. 2dfn
      automatically matched to d1l4ua_
      complexed with adp, cl, skm
      1. region a:2-166 [131475]
    17. 2iyz
      automatically matched to d1l4ua_
      complexed with adp, s3p
      1. region a:2-166 [137816]
    18. 1u8a
      complexed with adp, cl, skm
      1. chain a [113115]
    19. 1we2
      automatically matched to d1l4ua_
      complexed with adp, cl, dhk, mg
      1. region a:2-166 [120940]
    20. 1zyu
      automatically matched to d1l4ua_
      complexed with acp, skm
      1. region a:2-166 [125869]
    21. 2dft
      automatically matched to d1l4ua_
      complexed with adp, cl, mg
      1. region a:2-166 [131476]
    22. 2dft
      automatically matched to d1l4ua_
      complexed with adp, cl, mg
      1. region b:2-166 [131477]
    23. 2dft
      automatically matched to d1l4ua_
      complexed with adp, cl, mg
      1. region c:2-166 [131478]
    24. 2dft
      automatically matched to d1l4ua_
      complexed with adp, cl, mg
      1. region d:2-166 [131479]
  4. Campylobacter jejuni [TaxId: 197] [102345] (1)
    1. 1via
      structural genomics
      complexed with so4
      1. chain a [100754]
      2. chain b [100755]
Chloramphenicol phosphotransferase [52569] (1)
similar to the nucleotide/nucleoside kinases but acts on different substrate
1. Chloramphenicol phosphotransferase [52570]
  1. Streptomyces venezuelae [TaxId: 54571] [52571] (6)
    1. 1qhx
      complexed with atp, mg
      1. chain a [31936]
    2. 1qhy
      complexed with ags, clm, mg, so4
      1. chain a [31939]
    3. 1qhs
      complexed with clm, so4
      1. chain a [31938]
    4. 1qhn
      complexed with so4
      1. chain a [31937]
    5. 1grq
      complexed with clk, so4
      1. chain a [65506]
    6. 1grr
      complexed with clc, so4
      1. chain a [65507]
Gluconate kinase [75195] (1)
similar to the nucleotide/nucleoside kinases
1. Gluconate kinase [75196]
  1. Escherichia coli [TaxId: 562] [75197] (6)
    1. 1knq
      complexed with cl
      1. chain a [72786]
      2. chain b [72787]
    2. 1ko1
      complexed with cl
      1. chain a [72791]
      2. chain b [72792]
    3. 1ko5
      complexed with atp, mg
      1. chain a [72795]
      2. chain b [72796]
    4. 1ko4
      complexed with cl, mse
      1. chain a [72793]
      2. chain b [72794]
    5. 1ko8
      complexed with 6pg, mg
      1. chain a [72801]
      2. chain b [72802]
    6. 1kof
      complexed with acp, mg
      1. chain a [72803]
      2. chain b [72804]
Plasmid maintenance system epsilon/zeta, toxin zeta subunit [82395] (1)
similar to the nucleotide/nucleoside kinases; extra N- and C-terminal structures
1. Plasmid maintenance system epsilon/zeta, toxin zeta subunit [82396]
  1. Streptococcus pyogenes [TaxId: 1314] [82397] (1)
    1. 1gvn
      complexed with so4
      1. chain b [76354]
      2. chain d [76356]
Adenosine-5'phosphosulfate kinase (APS kinase) [52572] (2)
1. Adenosine-5'phosphosulfate kinase (APS kinase) [52573]
  1. Fungus (Penicillium chrysogenum) [TaxId: 5076] [52574] (3)
    1. 1m7g
      complexed with adp, adx, av2, cry, so4
      1. chain a [78724]
      2. chain b [78725]
      3. chain c [78726]
      4. chain d [78727]
    2. 1m7h
      complexed with adp, adx, so4
      1. chain a [78728]
      2. chain b [78729]
      3. chain c [78730]
      4. chain d [78731]
    3. 1d6j
      1. chain a [31940]
      2. chain b [31941]
  2. Human (Homo sapiens) [TaxId: 9606] [142215] (6)
    SQ O43252 34-228
    1. 1x6v
      complexed with adp, cl
      1. region a:34-228 [121757]
    2. 1x6v
      automatically matched to 1X6V A:34-228
      complexed with adp, cl
      1. region b:34-228 [121760]
    3. 1xjq
      automatically matched to 1X6V A:34-228
      complexed with adp
      1. region a:34-228 [122037]
    4. 1xjq
      automatically matched to 1X6V A:34-228
      complexed with adp
      1. region b:34-228 [122040]
    5. 1xnj
      automatically matched to 1X6V A:34-228
      complexed with adp, adx
      1. region a:34-228 [122191]
    6. 1xnj
      automatically matched to 1X6V A:34-228
      complexed with adp, adx
      1. region b:34-228 [122194]
ATP sulfurylase C-terminal domain [64011] (2)
1. ATP sulfurylase C-terminal domain [64012]
  1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [64013] (7)
    1. 1g8f
      complexed with acy, ca, cd, mg, na, so4, trs
      1. region a:390-511 [60350]
    2. 1j70
      complexed with na, po4
      1. region a:390-511 [84120]
      2. region b:390-511 [84123]
      3. region c:390-511 [84126]
    3. 1jec
      complexed with acy, ca, cd, mg, na, so4, thj
      1. region a:390-511 [66597]
    4. 1g8g
      complexed with acy, adx, ca, cd, mg, na, trs
      1. region a:390-511 [60353]
      2. region b:390-511 [60356]
    5. 1g8h
      complexed with acy, adx, ca, cd, mg, na, pop
      1. region a:390-511 [60359]
      2. region b:390-511 [60362]
    6. 1jee
      complexed with acy, adx, ca, cd, lco, mg, na, pop, trs
      1. region a:390-511 [66606]
      2. region b:390-511 [66609]
    7. 1jed
      complexed with acy, adp, ca, cd, mg, na, trs
      1. region a:390-511 [66600]
      2. region b:390-511 [66603]
  2. Fungus (Penicillium chrysogenum) [TaxId: 5076] [64014] (2)
    1. 1m8p
      complexed with pps
      1. region a:391-573 [78779]
      2. region b:391-573 [78782]
      3. region c:391-573 [78785]
    2. 1i2d
      complexed with adx
      1. region a:391-573 [61558]
      2. region b:391-573 [61561]
      3. region c:391-573 [61564]
PAPS sulfotransferase [52575] (15)
Pfam 00685
similar to the nucleotide/nucleoside kinases but transfer sulphate group
1. Estrogen sulfotransferase (STE, sult1e1) [52576]
  1. Mouse (Mus musculus) [TaxId: 10090] [52577] (3)
    1. 1aqu
      complexed with a3p, est
      1. chain a [31942]
      2. chain b [31943]
    2. 1aqy
      complexed with a3p
      1. chain a [31944]
      2. chain b [31945]
    3. 1bo6
      complexed with a3p, vo4
      1. chain a [31946]
      2. chain b [31947]
  2. Human (Homo sapiens) [TaxId: 9606] [75198] (2)
    1. 1g3m
      complexed with a3p, edo, pcq
      1. chain a [83268]
      2. chain b [83269]
    2. 1hy3
      complexed with pps; mutant
      1. chain a [71090]
      2. chain b [71091]
2. Hydroxysteroid sulfotransferase sult2a1 [52578]
  1. Human (Homo sapiens) [TaxId: 9606] [52579] (3)
    1. 1j99
      complexed with and, hgi, iod
      1. chain a [71618]
    2. 1efh
      complexed with a3p
      1. chain a [31948]
      2. chain b [31949]
    3. 1ov4
      complexed with ae2, so4; mutant
      1. chain a [93581]
3. Aryl sulfotransferase sult1a [102346]
  1. Human (Homo sapiens) [TaxId: 9606] [102347] (3)
    1. 1ls6
      complexed with a3p, npo
      1. chain a [91115]
    2. 2d06
      automatically matched to d1ls6a_
      complexed with a3p, est
      1. region a:8-295 [131061]
    3. 2d06
      automatically matched to d1ls6a_
      complexed with a3p, est
      1. region b:8-295 [131062]
4. Aryl sulfotransferase sult1a3 [52580]
  1. Human (Homo sapiens) [TaxId: 9606] [52581] (3)
    1. 2a3r
      automatically matched to d1cjma_
      complexed with a3p, ldp
      1. region a:9-293 [126094]
    2. 2a3r
      automatically matched to d1cjma_
      complexed with a3p, ldp
      1. region b:9-293 [126095]
    3. 1cjm
      1. chain a [31950]
5. Pregnenolone sulfotransferase sult2b1a [102348]
  1. Human (Homo sapiens) [TaxId: 9606] [102349] (1)
    cytosolic enzyme
    1. 1q1q
      complexed with a3p, na, nhe
      1. chain a [95599]
6. Cholesterol sulfotransferase sult2b1b [102350]
  1. Human (Homo sapiens) [TaxId: 9606] [102351] (3)
    cytosolic enzyme
    1. 1q20
      complexed with a3p, na, plo
      1. chain a [95616]
    2. 1q1z
      complexed with a3p, na
      1. chain a [95615]
    3. 1q22
      complexed with a3p, and, na
      1. chain a [95617]
7. Putative steroid sulfotransferase rarO47 [102352]
  1. Thale cress (Arabidopsis thaliana) [TaxId: 3702] [102353] (2)
    1. 1q44
      complexed with mla
      1. chain a [95779]
    2. 2q3m
      automatically matched to d1q44a_
      complexed with mla
      1. region a:6-325 [139795]
8. Heparan sulfate N-deacetylase/N-sulfotransferase domain [52582]
  1. Human (Homo sapiens) [TaxId: 9606] [52583] (1)
    1. 1nst
      complexed with a3p
      1. chain a [31951]
9. Heparan sulfate 3-O-sulfotransferase [102354]
  1. Mouse (Mus musculus) [TaxId: 10090] [102355] (1)
    SQ O35310 48-311
    1. 1vkj
      complexed with a3p, so4; mutant
      1. chain a [108666]
      2. chain b [108667]
      3. chain c [108668]
10. Retinol dehydratase [64015]
  1. Fall armyworm (Spodoptera frugiperda) [TaxId: 7108] [64016] (2)
    1. 1fmj
      complexed with a3p, ca, hg, rtl
      1. chain a [59879]
      2. chain b [59880]
    2. 1fml
      complexed with a3p, ca, rtl
      1. chain a [59881]
      2. chain b [59882]
11. Stf0 sulfotransferase [110530]
  1. Mycobacterium smegmatis [TaxId: 1772] [110531] (1)
    SQ P84151
    1. 1tex
      complexed with tre
      1. chain a [106818]
      2. chain b [106819]
      3. chain c [106820]
      4. chain d [106821]
12. Heparan sulfate glucosamine 3-O-sulfotransferase 3 [110532]
  1. Human (Homo sapiens) [TaxId: 9606] [110533] (2)
    SQ Q9Y663 139-406 # isoform 3A1; 100% sequence identity to isoform 3B1 domain (SQ Q9Y662 133-390)
    1. 1t8t
      complexed with a3p, cit
      1. chain a [106685]
      2. chain b [106686]
    2. 1t8u
      complexed with a3p, ids, na, sgn, so4, uap
      1. chain a [106687]
      2. chain b [106688]
13. Thyroid hormone sulfotransferase Sult1b1 [117530]
  1. Human (Homo sapiens) [TaxId: 9606] [117531] (1)
    SQ O43704
    1. 1xv1
      complexed with a3p
      1. chain a [116074]
      2. chain b [116075]
14. Sulfotransferase Sult1c2 [159556]
  1. Human (Homo sapiens) [TaxId: 9606] [159557] (2)
    SQ O00338 12-296
    1. 3bfx
      complexed with a3p; mutant
      1. region a:12-296 [155239]
    2. 3bfx
      automatically matched to 3BFX A:12-296
      complexed with a3p; mutant
      1. region b:12-296 [155240]
Phosphoribulokinase/pantothenate kinase [52584] (5)
1. Phosphoribulokinase [52585]
  1. Rhodobacter sphaeroides [TaxId: 1063] [52586] (1)
    1. 1a7j
      complexed with so4
      1. chain a [31952]
2. Pantothenate kinase PanK [52587]
  has a circularly permuted fold compared to the phosphoribulokinase fold
  1. Escherichia coli [TaxId: 562] [52588] (3)
    SQ P15044
    1. 1sq5
      complexed with adp, pau
      1. chain a [105882]
      2. chain b [105883]
      3. chain c [105884]
      4. chain d [105885]
    2. 1esm
      complexed with coa
      1. chain a [31953]
      2. chain b [31954]
      3. chain c [31955]
      4. chain d [31956]
    3. 1esn
      complexed with anp, mg
      1. chain a [31957]
      2. chain b [31958]
      3. chain c [31959]
      4. chain d [31960]
3. Hypothetical protein Ygr205W [102356]
  close structural similarity to PanK
  1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [102357] (1)
    1. 1odf
      complexed with gol, so4
      1. chain a [92782]
4. Hypothetical protein rbstp0775 [102358]
  structural similarity to PanK
  1. Bacillus stearothermophilus [TaxId: 1422] [102359] (1)
    1. 1rz3
      structural genomics
      complexed with act, ca
      1. chain a [98132]
5. Uridine-cytidine kinase 2 [102360]
  1. Human (Homo sapiens) [TaxId: 9606] [102361] (7)
    1. 1uj2
      complexed with adp, c5p, mg
      1. chain a [99452]
      2. chain b [99453]
    2. 1xrj
      automatically matched to d1udwb_
      complexed with adp, c5p, mg
      1. region a:20-230 [122256]
    3. 1xrj
      automatically matched to d1udwb_
      complexed with adp, c5p, mg
      1. region b:20-230 [122257]
    4. 1uei
      complexed with utp
      1. chain a [99261]
      2. chain b [99262]
    5. 1udw
      complexed with ctp
      1. chain a [99226]
      2. chain b [99227]
    6. 1uej
      complexed with cit, ctn
      1. chain a [99263]
      2. chain b [99264]
    7. 1ufq
      1. chain a [99350]
      2. chain b [99351]
      3. chain c [99352]
      4. chain d [99353]
6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, kinase domain [52589] (2)
1. 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, kinase domain [52590]
  bifunctional enzyme
  1. Rat (Rattus norvegicus) [TaxId: 10116] [52591] (3)
    1. 1bif
      complexed with atg, gol, mg, po4; mutant
      1. region a:37-249 [31961]
    2. 3bif
      complexed with bog, po4, sin; mutant
      1. region a:37-249 [31962]
    3. 2bif
      complexed with app, bog, f6p, mg, po4, sux; mutant
      1. region a:37-249 [31963]
      2. region b:37-249 [31964]
  2. Human (Homo sapiens) [TaxId: 9606] [82398] (1)
    1. 1k6m
      complexed with atg, po4; mutant
      1. region a:39-251 [77275]
      2. region b:39-251 [77277]
G proteins [52592] (118)
core: mixed beta-sheet of 6 strands, order 231456; strand 2 is antiparallel to the rest
1. cH-p21 Ras protein [52593]
  1. Human (Homo sapiens) [TaxId: 9606] [52594] (57)
    SQ Q6P716
    1. 1ctq
      1. chain a [31965]
    2. 1zw6
      automatically matched to 1ZVQ A:1-166
      complexed with ca, gnp, mg; mutant
      1. region a:1-166 [125737]
    3. 2rge
      automatically matched to d1aa9a_
      complexed with ca, gnp, mg
      1. region a:1-166 [152011]
    4. 5p21
      complexed with gnp, mg
      1. chain a [31966]
    5. 1lf0
      complexed with ca, gnp, mg; mutant
      1. chain a [77913]
    6. 1qra
      1. chain a [31967]
    7. 121p
      complexed with gto, mg
      1. chain a [31968]
    8. 821p
      complexed with gtn, mg; mutant
      1. chain a [31969]
    9. 1lf5
      complexed with gdp, mg; mutant
      1. chain a [77917]
    10. 1clu
      complexed with dbg, mg; mutant
      1. chain a [31970]
    11. 1xj0
      automatically matched to 1XCM A:1-166
      complexed with gdp, mg; mutant
      1. region a:1-166 [122024]
    12. 1xcm
      complexed with gnp, mg; mutant
      1. region a:1-166 [121855]
    13. 2rgd
      automatically matched to d721pa_
      complexed with ca, gnp, mg; mutant
      1. region a:1-166 [152010]
    14. 1p2t
      complexed with gnp, mg
      1. chain a [93958]
    15. 2c5l
      automatically matched to d2q21__
      complexed with gol, gtp, mg; mutant
      1. region a:1-166 [129922]
    16. 2c5l
      automatically matched to d2q21__
      complexed with gol, gtp, mg; mutant
      1. region b:1-166 [129923]
    17. 1p2u
      complexed with gnp, ioh, mg
      1. chain a [93959]
    18. 1zvq
      complexed with gdp, mg; mutant
      1. region a:1-166 [125722]
    19. 1jah
      complexed with gcp, mg; mutant
      1. chain a [31972]
    20. 1jai
      complexed with gcp, mn; mutant
      1. chain a [31971]
    21. 1rvd
      complexed with dbg, mg; mutant
      1. chain a [31974]
    22. 1nvu
      complexed with gtp, mg, po4; mutant
      1. chain q [86274]
      2. chain r [86275]
    23. 1lfd
      complexed with gnp, mg; mutant
      1. chain b [31976]
      2. chain d [31977]
    24. 1ioz
      complexed with gdp
      1. chain a [66245]
    25. 1nvv
      complexed with gnp, mg, po4; mutant
      1. chain q [86277]
      2. chain r [86278]
    26. 2uzi
      automatically matched to d2q21a_
      complexed with gtp, mg, zn; mutant
      1. region r:1-166 [152348]
    27. 721p
      complexed with gtn, mg; mutant
      1. chain a [31975]
    28. 1gnr
      complexed with cag, mg
      1. chain a [31973]
    29. 1p2v
      complexed with gnp, hez, mg
      1. chain a [93960]
    30. 4q21
      complexed with gdp, mg
      1. chain a [31978]
    31. 1p2s
      complexed with etf, gnp, mg
      1. chain a [93957]
    32. 6q21
      complexed with gcp, mg
      1. chain a [31979]
      2. chain b [31980]
      3. chain c [31981]
      4. chain d [31982]
    33. 1agp
      complexed with gnp, mg; mutant
      1. chain a [31985]
    34. 421p
      complexed with gtn, mg; mutant
      1. chain a [31983]
    35. 1q21
      complexed with gdp, mg
      1. chain a [31984]
    36. 1xd2
      complexed with gdp, mg, po4; mutant
      1. chain a [115142]
      2. chain b [115143]
    37. 221p
      complexed with gtn, mg; mutant
      1. chain a [31987]
    38. 2q21
      complexed with gdp, mg; mutant
      1. chain a [31986]
    39. 1nvw
      complexed with gnp, mg, po4
      1. chain q [86280]
      2. chain r [86281]
    40. 621p
      complexed with gtn, mg; mutant
      1. chain a [31988]
    41. 1bkd
      1. chain r [31993]
    42. 2vh5
      automatically matched to d2q21a_
      complexed with gtp, mg, zn; mutant
      1. region r:1-166 [153047]
    43. 1wq1
      complexed with af3, gdp, mg
      1. chain r [31991]
    44. 1gnp
      complexed with agn, mg
      1. chain a [31990]
    45. 1gnq
      complexed with cag, mg
      1. chain a [31989]
    46. 1he8
      complexed with gnp, mg; mutant
      1. chain b [31995]
    47. 1nvx
      complexed with gtp, mg, po4; mutant
      1. chain q [86283]
      2. chain r [86284]
    48. 521p
      complexed with gtp, mg; mutant
      1. chain a [31992]
    49. 1iaq
      complexed with gnp, mg; mutant
      1. chain a [62120]
      2. chain b [62121]
      3. chain c [62122]
    50. 1k8r
      complex with bry2 RBD
      complexed with gnp, mg
      1. chain a [72179]
    51. 1plj
      complexed with cag, mg; mutant
      1. chain a [31994]
    52. 1plk
      complexed with gtp, mg; mutant
      1. chain a [31996]
    53. 1pll
      complexed with gdp; mutant
      1. chain a [31997]
    54. 1crr
      complexed with gdp, mg
      1. chain a [31998]
    55. 1crp
      complexed with gdp, mg
      1. chain a [32000]
    56. 1crq
      complexed with gdp, mg
      1. chain a [31999]
    57. 1aa9
      complexed with gdp, mg
      1. chain a [32001]
2. Rac [52595]
  1. Human (Homo sapiens) [TaxId: 9606] [52596] (23)
    1. 1mh1
      rac1
      complexed with gnp, mg; mutant
      1. chain a [32002]
    2. 2vrw
      automatically matched to d1foeb_
      complexed with zn
      1. region a:1-177 [153524]
    3. 1ryh
      alternative splicing variant of rac1
      complexed with gnp, mg
      1. chain a [98102]
      2. chain b [98103]
    4. 1ryf
      alternative splicing variant of rac1
      complexed with gdp, mg
      1. chain a [98099]
      2. chain b [98100]
    5. 1he1
      rac1 in complex with the GAP domain of ExoS
      complexed with af3, gdp, mg, ni
      1. chain c [32003]
      2. chain d [32004]
    6. 2p2l
      automatically matched to d1hh4a_
      complexed with gdp, zn
      1. region a:2-178 [139465]
    7. 2p2l
      automatically matched to d1hh4a_
      complexed with gdp, zn
      1. region b:2-178 [139466]
    8. 2p2l
      automatically matched to d1hh4a_
      complexed with gdp, zn
      1. region c:2-178 [139467]
    9. 2fju
      automatically matched to d1foeb_
      complexed with ca, gsp, mg
      1. region a:1-177 [133622]
    10. 2nz8
      automatically matched to d1foeb_
      1. region a:1-177 [138837]
    11. 1ds6
      rac2 in complex with RhoGDI (chain A)
      complexed with gdp, mg
      1. chain a [32006]
    12. 1g4u
      rac1 in complex with the GAP domain of SptP
      complexed with af3, gdp, mg; mutant
      1. chain r [32005]
    13. 1e96
      rac1
      complexed with gtp, mg; mutant
      1. chain a [32007]
    14. 1i4d
      rac1 in complex with arfaptin
      complexed with gdp, mg
      1. chain d [61684]
    15. 2h7v
      automatically matched to d1hh4a_
      complexed with gdp, mg; mutant
      1. region a:2-178 [136223]
    16. 2h7v
      automatically matched to d1hh4a_
      complexed with gdp, mg; mutant
      1. region b:2-178 [136224]
    17. 1foe
      complexed with so4; mutant
      1. chain b [32008]
      2. chain d [32009]
      3. chain f [32010]
      4. chain h [32011]
    18. 3bji
      automatically matched to d1foeb_
      complexed with zn
      1. region c:1-177 [155330]
    19. 3bji
      automatically matched to d1foeb_
      complexed with zn
      1. region d:3-176 [155331]
    20. 1i4t
      rac1 in complex with arfaptin
      complexed with gnp, mg; mutant
      1. chain d [61731]
    21. 1i4l
      rac1 in complex with arfaptin
      complexed with gdp, mg
      1. chain d [61720]
    22. 1hh4
      rac1 in complex with RhoGD
      complexed with gdp, ger, mg
      1. chain a [61037]
      2. chain b [61038]
    23. 2rmk
      automatically matched to d1e96a_
      complexed with gcp, mg; mutant
      1. region a:2-178 [152166]
3. Ras-related protein RalA [89662]
  1. Human (Homo sapiens) [TaxId: 9606] [89663] (7)
    1. 2a9k
      automatically matched to d1uada_
      complexed with gdp, mg, nad
      1. region a:13-182 [126442]
    2. 2a78
      automatically matched to d1uada_
      complexed with gdp, mg
      1. region a:13-182 [126329]
    3. 1zc3
      complexed with gnp, mg; mutant
      1. region a:11-183 [124880]
    4. 1zc3
      automatically matched to 1ZC3 A:11-183
      complexed with gnp, mg; mutant
      1. region c:11-183 [124882]
    5. 1uad
      complexed with the Sec5 domain Ral-binding domain
      complexed with gnp, mg
      1. chain a [88377]
      2. chain b [88378]
    6. 1zc4
      automatically matched to 1ZC3 A:11-183
      complexed with gnp, mg; mutant
      1. region a:11-183 [124884]
    7. 1zc4
      automatically matched to 1ZC3 A:11-183
      complexed with gnp, mg; mutant
      1. region c:11-183 [124886]
  2. Cotton-top tamarin (Saguinus oedipus) [TaxId: 9490] [117532] (3)
    SQ P63320 # 100% identical to the mouse and rat orthologs (SQ P63321 P63322)
    1. 1u8z
      complexed with gdp, mg
      1. chain a [113212]
      2. chain b [113213]
    2. 1u8y
      complexed with gnp, mg
      1. chain a [113210]
      2. chain b [113211]
    3. 1u90
      complexed with gdp, mg
      1. chain a [113214]
      2. chain b [113215]
4. Rap1A [52597]
  1. Human (Homo sapiens) [TaxId: 9606] [52598] (2)
    1. 1c1y
      complexed with ca, gtp, mg
      1. chain a [32012]
    2. 1gua
      complexed with ca, gnp, mg; mutant
      1. chain a [32013]
5. Rap2a [52599]
  1. Human (Homo sapiens) [TaxId: 9606] [52600] (3)
    1. 1kao
      complexed with gdp, mg
      1. chain a [32014]
    2. 3rap
      1. chain r [32015]
      2. chain s [32016]
    3. 2rap
      complexed with gtp, mg; mutant
      1. chain a [32017]
6. Rab3a [52601]
  1. Rat (Rattus norvegicus) [TaxId: 10116] [52602] (2)
    1. 3rab
      complexed with gnp, mg
      1. chain a [32018]
    2. 1zbd
      complexed with gtp, mg, zn; mutant
      1. chain a [32019]
7. Rab5a [82399]
  1. Human (Homo sapiens) [TaxId: 9606] [82400] (11)
    SQ P20339 18-182
    1. 1r2q
      complexed with gnp, gol, mg
      1. chain a [96874]
    2. 1n6h
      complexed with bme, gnp, mg
      1. chain a [80197]
    3. 1n6p
      complexed with gnp, mg; mutant
      1. chain a [80203]
    4. 1n6r
      complexed with bme, gnp, mg; mutant
      1. chain a [80211]
    5. 1n6k
      complexed with af3, bme, gdp, mg; mutant
      1. chain a [80199]
    6. 1n6n
      complexed with bme, gnp, mg; mutant
      1. chain a [80201]
    7. 1n6l
      complexed with bme, gtp, mg; mutant
      1. chain a [80200]
    8. 1n6i
      complexed with bme, gdp, mg; mutant
      1. chain a [80198]
    9. 1n6o
      complexed with bme, gnp, mg; mutant
      1. chain a [80202]
    10. 1tu4
      complexed with co, gdp, so4
      1. chain a [112649]
      2. chain b [112650]
      3. chain c [112651]
      4. chain d [112652]
    11. 1tu3
      complexed with gnp, mg
      1. chain a [112639]
      2. chain b [112640]
      3. chain c [112641]
      4. chain d [112642]
      5. chain e [112643]
8. Rab5c [52603]
  1. Mouse (Mus musculus) [TaxId: 10090] [52604] (4)
    1. 1z07
      complexed with gnp, mg; mutant
      1. region a:19-182 [124302]
    2. 1huq
      complexed with gnp, mg
      1. chain a [32020]
    3. 1z0d
      complexed with gdp, mg, po4; mutant
      1. region a:19-183 [124311]
    4. 1z0d
      automatically matched to 1Z0D A:19-183
      complexed with gdp, mg, po4; mutant
      1. region c:19-183 [124312]
9. Rab6 [52605]
  1. Malaria parasite (Plasmodium falciparum) [TaxId: 5833] [52606] (1)
    1. 1d5c
      complexed with gdp, mg
      1. chain a [32021]
  2. Human (Homo sapiens) [TaxId: 9606] [142216] (1)
    SQ P20340 13-176
    1. 1yzq
      complexed with gnp, mg
      1. region a:14-177 [124286]
10. Rab11a [102362]
  1. Human (Homo sapiens) [TaxId: 9606] [102363] (13)
    1. 2d7c
      automatically matched to d1oiwa_
      complexed with gtp, mes, mg; mutant
      1. region a:8-173 [131317]
    2. 2d7c
      automatically matched to d1oiwa_
      complexed with gtp, mes, mg; mutant
      1. region b:8-173 [131318]
    3. 1oix
      automatically matched to d1oiwa_
      complexed with cl, gdp, mg, po4; mutant
      1. region a:8-173 [118710]
    4. 2hv8
      automatically matched to d1oiwa_
      complexed with 2me, gtp, mes, mg, so4; mutant
      1. region a:8-173 [136794]
    5. 2hv8
      automatically matched to d1oiwa_
      complexed with 2me, gtp, mes, mg, so4; mutant
      1. region b:8-173 [136795]
    6. 2hv8
      automatically matched to d1oiwa_
      complexed with 2me, gtp, mes, mg, so4; mutant
      1. region c:8-173 [136796]
    7. 1yzk
      automatically matched to d1oiva_
      complexed with gnp, mg
      1. region a:8-173 [124281]
    8. 1oiv
      complexed with edo, gdp, so4; mutant
      1. chain a [93076]
      2. chain b [93077]
    9. 1yzn
      automatically matched to d1oiva_
      complexed with gnp, mg
      1. region a:4-169 [124284]
    10. 1oiw
      complexed with gsp, mg; mutant
      1. chain a [93078]
    11. 2gzh
      automatically matched to d1oiwa_
      complexed with gtp, mg, po4; mutant
      1. region a:8-173 [135905]
    12. 2gzd
      automatically matched to d1oiwa_
      complexed with gtp, mg; mutant
      1. region a:8-173 [135901]
    13. 2gzd
      automatically matched to d1oiwa_
      complexed with gtp, mg; mutant
      1. region b:8-173 [135902]
  2. Saccharomyces cerevisiae [TaxId: 4932] [159558] (4)
    1. 3cue
      automatically matched to d1yzna1
      complexed with plm
      1. region f:4-169 [156989]
    2. 3cue
      automatically matched to d1yzna1
      complexed with plm
      1. region l:4-169 [156990]
    3. 3cue
      automatically matched to d1yzna1
      complexed with plm
      1. region r:4-169 [156991]
    4. 3cue
      automatically matched to d1yzna1
      complexed with plm
      1. region x:4-169 [156992]
11. Rab-related protein Sec4 [52607]
  1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [52608] (5)
    1. 1g16
      complexed with co, gdp
      1. chain a [32022]
      2. chain b [32023]
      3. chain c [32024]
      4. chain d [32025]
    2. 1g17
      complexed with gtn, mg
      1. chain a [32026]
      2. chain b [32027]
    3. 3cph
      automatically matched to d2ocyc1
      complexed with gdp, mg
      1. region a:20-186 [156886]
    4. 2eqb
      automatically matched to 2OCY C:18-186
      complexed with po4
      1. region a:19-186 [132286]
    5. 2ocy
      1. region c:18-186 [139023]
12. Rab-related protein ypt7p [75199]
  1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [75200] (2)
    1. 1ky3
      complexed with gdp, mg
      1. chain a [73193]
    2. 1ky2
      complexed with gnp, mg
      1. chain a [73192]
13. Ran [52609]
  1. Dog (Canis familiaris) [TaxId: 9615] [52610] (6)
    SQ P62825
    1. 1wa5
      complexed with gtp, mg
      1. chain a [114431]
    2. 1byu
      complexed with gdp, mg
      1. chain a [32032]
      2. chain b [32033]
    3. 3ran
      complexed with gdp, mg; mutant
      1. chain a [32028]
      2. chain b [32029]
      3. chain c [32030]
      4. chain d [32031]
    4. 1qg2
      complexed with gdp, mo4; mutant
      1. chain a [32034]
    5. 1qg4
      complexed with gdp, mo4; mutant
      1. chain a [32035]
      2. chain b [32036]
    6. 1a2k
      complexed with gdp, mg, so4
      1. chain c [32037]
      2. chain d [32038]
      3. chain e [32039]
  2. Human (Homo sapiens) [TaxId: 9606] [52611] (7)
    1. 1i2m
      complexed to RCC1
      complexed with so4
      1. chain a [61568]
      2. chain c [61570]
    2. 3ch5
      automatically matched to d1k5da_
      complexed with gdp, mg, so4, zn
      1. region a:8-205 [156620]
    3. 1ibr
      complexed with gnp, mg
      1. chain a [32040]
      2. chain c [32041]
    4. 1k5d
      complexed with gnp, mg; mutant
      1. chain a [68168]
      2. chain d [68171]
      3. chain g [68174]
      4. chain j [68177]
    5. 1rrp
      complexed with gnp, mg
      1. chain a [32042]
      2. chain c [32043]
    6. 1k5g
      complexed with af3, gdp, mg; mutant
      1. chain a [68180]
      2. chain d [68183]
      3. chain g [68186]
      4. chain j [68189]
    7. 1qbk
      complexed with gnp, mg
      1. chain c [32044]
14. RhoA [52612]
  1. Human (Homo sapiens) [TaxId: 9606] [52613] (14)
    SQ P61586 2-181
    1. 1kmq
      complexed with dox, gnp, mg; mutant
      1. chain a [84412]
    2. 1tx4
      complexed with alf, gdp, mg
      1. chain b [32045]
    3. 1ow3
      complexed with gdp, mg, mgf
      1. chain b [87486]
    4. 1dpf
      complexed with gdp; mutant
      1. chain a [32046]
    5. 1cxz
      complexed with gsp, mg; mutant
      1. chain a [32048]
    6. 1a2b
      complexed with gsp, mg; mutant
      1. chain a [32049]
    7. 1ftn
      complexed with gdp, mg; mutant
      1. chain a [32047]
    8. 1s1c
      complexed with gtn, mg
      1. chain a [98340]
      2. chain b [98341]
    9. 1lb1
      mutant
      1. chain b [73786]
      2. chain d [73789]
      3. chain f [73792]
      4. chain h [73795]
    10. 1xcg
      mutant
      1. chain b [115122]
      2. chain f [115125]
    11. 1x86
      complexed with po4; mutant
      1. chain b [109506]
      2. chain d [109509]
      3. chain f [109512]
      4. chain h [109515]
    12. 2rgn
      automatically matched to d1x86b_
      complexed with alf, gdp, mg
      1. region c:4-180 [152014]
    13. 2rgn
      automatically matched to d1x86b_
      complexed with alf, gdp, mg
      1. region f:5-180 [152017]
    14. 1cc0
      1. chain a [32050]
      2. chain c [32051]
15. RhoE (RND3) [75201]
  1. Mouse (Mus musculus) [TaxId: 10090] [75202] (2)
    1. 1m7b
      complexed with gtp, mg
      1. chain a [74572]
    2. 1gwn
      complexed with gtp, mo2
      1. chain a [70672]
      2. chain c [70673]
16. ADP-ribosylation factor [52614]
  1. Human (Homo sapiens), ARF1 [TaxId: 9606] [52615] (14)
    SQ P32889
    1. 1r8s
      complexed with a sec7 domain
      complexed with bme, fmt, gdp, so3, so4; mutant
      1. chain a [97247]
    2. 1o3y
      complexed with gtp, mg; mutant
      1. chain a [86618]
      2. chain b [86619]
    3. 1j2j
      complexed with gtp, iod, mg; mutant
      1. chain a [84016]
    4. 1s9d
      complexed with a sec7 domain
      complexed with afb, gdp, mg; mutant
      1. chain a [98750]
    5. 1r8q
      complexed with a sec7 domain
      complexed with afb, g3d, mg, zn; mutant
      1. chain a [97243]
      2. chain b [97244]
    6. 2j59
      automatically matched to d1o3ya_
      complexed with dio, edo, gtp, mg, so4; mutant
      1. region a:16-180 [138029]
    7. 2j59
      automatically matched to d1o3ya_
      complexed with dio, edo, gtp, mg, so4; mutant
      1. region b:16-180 [138030]
    8. 2j59
      automatically matched to d1o3ya_
      complexed with dio, edo, gtp, mg, so4; mutant
      1. region c:16-180 [138031]
    9. 2j59
      automatically matched to d1o3ya_
      complexed with dio, edo, gtp, mg, so4; mutant
      1. region d:16-180 [138032]
    10. 2j59
      automatically matched to d1o3ya_
      complexed with dio, edo, gtp, mg, so4; mutant
      1. region e:16-180 [138033]
    11. 2j59
      automatically matched to d1o3ya_
      complexed with dio, edo, gtp, mg, so4; mutant
      1. region f:16-180 [138034]
    12. 1re0
      complexed with a sec7 domain
      complexed with afb, cit, gdp, mg
      1. chain a [97317]
    13. 1hur
      complexed with gdp, mg
      1. chain a [32052]
      2. chain b [32053]
    14. 1u81
      complexed with gdp, mg
      1. chain a [113113]
  2. Rat (Rattus norvegicus), ARF1 [TaxId: 10116] [52616] (2)
    1. 1rrg
      complexed with gdp, mg
      1. chain a [32054]
      2. chain b [32055]
    2. 1rrf
      complexed with gdp, mg
      1. chain a [32056]
  3. Human (Homo sapiens), ARF6 [TaxId: 9606] [52617] (6)
    1. 2a5d
      automatically matched to d1e0sa_
      complexed with gol, gtp, mg, na; mutant
      1. region a:12-174 [126172]
    2. 2a5f
      automatically matched to d1e0sa_
      complexed with gol, gtp, mg, na, nad; mutant
      1. region a:12-173 [126173]
    3. 1e0s
      complexed with dtt, gdp, nh4
      1. chain a [32057]
    4. 2a5g
      complexed with gtp, mg, na; mutant
      1. region a:12-173 [126174]
    5. 2j5x
      automatically matched to d1e0sa_
      complexed with gsp, mg
      1. region a:11-174 [138072]
    6. 2j5x
      automatically matched to d1e0sa_
      complexed with gsp, mg
      1. region b:11-174 [138073]
  4. Mouse (Mus musculus), ARL3 [TaxId: 10090] [52618] (2)
    1. 1fzq
      complexed with gdp, mes, nh4, so4
      1. chain a [32060]
    2. 3bh7
      automatically matched to d1fzqa_
      complexed with alf, gdp, mg
      1. region a:17-177 [155255]
  5. Mouse (Mus musculus), ARL2 [TaxId: 10090] [75203] (3)
    1. 1ksh
      complexed with GMP-PDE delta
      complexed with cme, gdp, mg, po4; mutant
      1. chain a [72914]
    2. 1ksg
      complexed with GMP-PDE delta
      complexed with gtp, mg; mutant
      1. chain a [72912]
    3. 1ksj
      complexed with GMP-PDE delta
      complexed with bme, cme, gdp, gtp, mg, mse, po4; mutant
      1. chain a [72916]
  6. Baker's yeast (Saccharomyces cerevisiae), ARF2 [TaxId: 4932] [82401] (1)
    1. 1mr3
      complexed with cry, egl, eoh, g3d, mg, pdo
      1. chain f [79422]
  7. Baker's yeast (Saccharomyces cerevisiae), ARL1 [TaxId: 4932] [82402] (1)
    1. 1moz
      complexed with gdp
      1. chain a [79368]
      2. chain b [79369]
  8. Human (Homo sapiens), ARL1 [TaxId: 9606] [102364] (2)
    1. 1upt
      complexed with gtp, mg
      1. chain a [99767]
      2. chain c [99769]
      3. chain e [99771]
      4. chain g [99773]
    2. 1r4a
      complexed with gnp, mg
      1. chain a [96986]
      2. chain b [96987]
      3. chain c [96988]
      4. chain d [96989]
  9. Human (Homo sapiens), ARF4 [TaxId: 9606] [142217] (2)
    SQ P18085 3-177
    1. 1z6x
      complexed with gdp, mg
      1. region a:4-178 [124571]
    2. 1z6x
      automatically matched to 1Z6X A:4-178
      complexed with gdp, mg
      1. region b:4-178 [124572]
  10. Human (Homo sapiens), ARL5A [TaxId: 9606] [142218] (3)
    SQ Q9Y689 2-178
    1. 1zj6
      complexed with g3d, so4
      1. region a:2-178 [125145]
    2. 1z6y
      automatically matched to 1ZJ6 A:2-178
      complexed with gdp
      1. region a:3-175 [124573]
    3. 1z6y
      automatically matched to 1ZJ6 A:2-178
      complexed with gdp
      1. region b:3-175 [124574]
  11. Human (Homo sapiens), ARL8A [TaxId: 9606] [142219] (1)
    SQ Q96BM9 18-181
    1. 1zd9
      complexed with gdp, mg
      1. region a:18-181 [124938]
  12. Human (Homo sapiens) [TaxId: 9606] [142220] (1)
    SQ P84085 6-179
    1. 2b6h
      complexed with cl, gdp, so4, unx
      1. region a:7-180 [127994]
  13. Human (Homo sapiens), ARL5B [TaxId: 9606] [142221] (1)
    SQ Q96KC2 6-173
    1. 1yzg
      complexed with gdp
      1. region a:6-173 [124276]
  14. Human(Homo sapiens), ARL8B [TaxId: 9606] [142222] (1)
    SQ Q9NVJ2 18-182
    1. 2al7
      complexed with gdp, mg
      1. region a:17-181 [126972]
17. SAR1 [69483]
  1. Chinese hamster (Cricetulus griseus) [TaxId: 10029] [69484] (3)
    1. 1f6b
      complexed with gdp, mg, so4
      1. chain a [64986]
      2. chain b [64987]
    2. 2fmx
      automatically matched to d1f6ba_
      complexed with gdp, mg, so4
      1. region a:13-198 [133796]
    3. 2fmx
      automatically matched to d1f6ba_
      complexed with gdp, mg, so4
      1. region b:13-198 [133797]
  2. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [82403] (2)
    1. 2qtv
      automatically matched to d1m2ob_
      complexed with gnp, mg, zn
      1. region b:24-189 [151362]
    2. 1m2o
      complexed with sec23
      complexed with gnp, mg, zn
      1. chain b [78485]
      2. chain d [78491]
  3. Human (Homo sapiens) [TaxId: 9606] [142223] (2)
    SQ Q9NR31 13-198
    1. 2gao
      complexed with gdp, unx
      1. region a:13-198 [134891]
    2. 2gao
      automatically matched to 2GAO A:13-198
      complexed with gdp, unx
      1. region b:14-198 [134892]
18. CDC42 [52619]
  1. Human (Homo sapiens) [TaxId: 9606] [52620] (21)
    1. 2ngr
      complexed with gdp, mg; mutant
      1. chain a [32061]
    2. 1grn
      complexed with gdp, mg
      1. chain a [32062]
    3. 2dfk
      automatically matched to d1aje__
      complexed with gol, so4
      1. region b:1-187 [131473]
    4. 2dfk
      automatically matched to d1aje__
      complexed with gol, so4
      1. region d:1-187 [131474]
    5. 1nf3
      complexed with gnp, mg; mutant
      1. chain a [85594]
      2. chain b [85595]
    6. 1kz7
      complexed with mse; mutant
      1. chain b [73335]
      2. chain d [73338]
    7. 1ki1
      complexed with so4; mutant
      1. chain a [72496]
      2. chain c [72499]
    8. 1gzs
      complexed with so4
      1. chain a [76424]
      2. chain c [76426]
    9. 1kzg
      mutant
      1. chain b [73357]
      2. chain d [73360]
    10. 2qrz
      automatically matched to d1ajea_
      complexed with gcp, mg, so4
      1. region a:1-187 [151309]
    11. 2qrz
      automatically matched to d1ajea_
      complexed with gcp, mg, so4
      1. region b:1-187 [151310]
    12. 1doa
      1. chain a [32065]
    13. 1a4r
      complexed with gdp, gnp, mg; mutant
      1. chain a [32063]
      2. chain b [32064]
    14. 1an0
      complexed with gdp, mg
      1. chain a [32066]
      2. chain b [32067]
    15. 1am4
      complexed with gnp, mg; mutant
      1. chain d [32068]
      2. chain e [32069]
      3. chain f [32070]
    16. 2ase
      mutant
      1. region a:1-178 [127252]
    17. 1cee
      complexed with gcp, mg
      1. chain a [32072]
    18. 1ees
      1. chain a [32073]
    19. 1aje
      1. chain a [32071]
    20. 1cf4
      complexed with gnp, mg; mutant
      1. chain a [32075]
    21. 1e0a
      complexed with gnp, mg; mutant
      1. chain a [32074]
  2. Mus musculus [TaxId: 10090] [159559] (2)
    1. 3eg5
      automatically matched to d1am4d_
      complexed with gnp, mg; mutant
      1. region a:2-177 [158146]
    2. 3eg5
      automatically matched to d1am4d_
      complexed with gnp, mg; mutant
      1. region c:2-177 [158147]
19. Ypt51 [52621]
  1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [52622] (1)
    1. 1ek0
      complexed with gdp, gnp, mg, mho, ni
      1. chain a [32076]
20. Chloroplast protein translocon GTPase Toc34 [69485]
  1. Garden pea (Pisum sativum) [TaxId: 3888] [69486] (1)
    1. 1h65
      complexed with gdp, mg
      1. chain a [65640]
      2. chain b [65641]
      3. chain c [65642]
21. Signal recognition particle receptor beta-subunit [89664]
  1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [89665] (1)
    1. 1nrj
      complexed with edo, gtp, mg
      1. chain b [86125]
  2. Mouse (Mus musculus) [TaxId: 10090] [142224] (2)
    SQ P47758 63-269
    1. 2fh5
      complexed with gtp, mg
      1. region b:63-269 [133478]
    2. 2go5
      automatically matched to 2FH5 B:63-269
      1. region 2:63-269 [135431]
22. Transducin (alpha subunit) [52623]
  common fold is interrupted with an all-alpha domain
  1. Cow (Bos taurus) [TaxId: 9913] [52624] (15)
    SQ P04896 39-388
    1. 1tad
      complexed with alf, ca, cac, gdp
      1. region a:27-56,a:178-342 [32077]
      2. region b:27-56,b:178-342 [32078]
      3. region c:27-56,c:178-344 [32079]
    2. 1tag
      complexed with gdp, mg
      1. region a:27-56,a:178-340 [32080]
    3. 1azt
      complexed with gsp, mg, po4; mutant
      1. region a:35-65,a:202-391 [32084]
      2. region b:35-69,b:202-391 [32085]
    4. 1azs
      complexed with fkp, gsp, mg; mutant
      1. region c:36-66,c:202-393 [32086]
    5. 1cul
      complexed with 103, 3po, cl, fok, gsp, mes, mg; mutant
      1. region c:39-65,c:202-386 [32087]
    6. 1tnd
      complexed with cac, gsp, mg
      1. region a:27-56,a:178-349 [32081]
      2. region b:27-56,b:178-342 [32082]
      3. region c:27-56,c:178-342 [32083]
    7. 1cs4
      complexed with 101, cl, fok, gsp, mes, mg, pop; mutant
      1. region c:39-65,c:202-388 [32088]
    8. 1cjt
      complexed with cl, dad, fok, gsp, mes, mg, mn; mutant
      1. region c:39-65,c:202-388 [32089]
    9. 1cju
      complexed with cl, dad, fok, gsp, mg; mutant
      1. region c:39-66,c:202-388 [32090]
    10. 1cjk
      complexed with ags, cl, fok, gsp, mes, mg, mn; mutant
      1. region c:39-65,c:202-388 [32092]
    11. 1cjv
      complexed with cl, dad, fok, gsp, mes, mg, zn; mutant
      1. region c:39-65,c:202-388 [32091]
    12. 2gvd
      automatically matched to d1azsc2
      complexed with 128, cl, fkp, gsp, mn
      1. region c:39-65,c:202-382 [135774]
    13. 1tl7
      complexed with cl, fok, gsp, mg, mn, onm
      1. region c:39-65,c:202-388 [112504]
    14. 1u0h
      complexed with cl, fok, gsp, mg, onm
      1. region c:39-65,c:202-388 [112919]
    15. 2gvz
      automatically matched to d1azsc2
      complexed with cl, fkp, gsp, mn, ona
      1. region c:39-65,c:202-382 [135800]
  2. Rat (Rattus norvegicus) [TaxId: 10116] [52625] (33)
    SQ P10824
    1. 1svs
      complexed with gnp, mg; mutant
      1. region a:32-60,a:182-347 [106051]
    2. 1cip
      complexed with gnp, mg
      1. region a:32-60,a:182-347 [32093]
    3. 1gia
      complexed with gsp, mg
      1. region a:34-60,a:182-343 [32094]
    4. 1svk
      complexed with alf, gdp, mg; mutant
      1. region a:33-60,a:182-345 [106050]
    5. 1as0
      complexed with gsp, mg, so4; mutant
      1. region a:32-60,a:182-344 [32095]
    6. 1bh2
      complexed with gsp, mg; mutant
      1. region a:32-60,a:182-346 [32097]
    7. 1bof
      complexed with gdp, mg, so4
      1. region a:10-60,a:182-354 [32100]
    8. 1gfi
      complexed with alf, gdp, mg
      1. region a:33-60,a:182-345 [32102]
    9. 1gdd
      complexed with gdp, so4
      1. region a:9-60,a:182-354 [32101]
    10. 1gil
      complexed with gsp, mg; mutant
      1. region a:34-60,a:182-343 [32106]
    11. 1git
      complexed with gdp, po4; mutant
      1. region a:32-60,a:182-348 [32105]
    12. 1as3
      complexed with gdp, so4; mutant
      1. region a:9-60,a:182-354 [32107]
    13. 1y3a
      automatically matched to d1kjya2
      complexed with gdp
      1. region a:34-60,a:182-345 [122583]
    14. 1y3a
      automatically matched to d1kjya2
      complexed with gdp
      1. region b:34-60,b:182-344 [122585]
    15. 1y3a
      automatically matched to d1kjya2
      complexed with gdp
      1. region c:34-60,c:182-344 [122587]
    16. 1y3a
      automatically matched to d1kjya2
      complexed with gdp
      1. region d:34-60,d:182-344 [122589]
    17. 2gtp
      automatically matched to d1kjya2
      complexed with alf, gdp, mg
      1. region a:32-60,a:182-348 [135679]
    18. 2gtp
      automatically matched to d1kjya2
      complexed with alf, gdp, mg
      1. region b:32-60,b:182-348 [135681]
    19. 2hlb
      automatically matched to d1agra2
      complexed with gdp, so4
      1. region a:9-60,a:182-354 [136564]
    20. 1as2
      complexed with gdp, po4; mutant
      1. region a:32-60,a:182-346 [32110]
    21. 1gg2
      complexed with gdp; mutant
      1. region a:5-60,a:182-348 [32109]
    22. 1gp2
      complexed with gdp; mutant
      1. region a:5-60,a:182-348 [32108]
    23. 1agr
      complexed with alf, cit, gdp, mg
      1. region a:5-60,a:182-354 [32111]
      2. region d:11-60,d:182-354 [32112]
    24. 2ik8
      automatically matched to d1kjya2
      complexed with alf, gdp, mg, so4
      1. region a:32-60,a:182-348 [137485]
    25. 2ik8
      automatically matched to d1kjya2
      complexed with alf, gdp, mg, so4
      1. region c:33-60,c:182-348 [137487]
    26. 1kjy
      bound to the goloco motif of rgs14, chains B and D
      complexed with cs, gdp, mg
      1. region a:30-60,a:182-349 [72625]
      2. region c:1030-1060,c:1182-1347 [72627]
    27. 1shz
      complexed with alf, gdp, mg
      1. region a:46-75,a:201-371 [118965]
    28. 1shz
      automatically matched to 1SHZ A:46-75,A:201-371
      complexed with alf, gdp, mg
      1. region d:46-75,d:201-371 [118967]
    29. 2g83
      automatically matched to d1kjya2
      complexed with alf, gdp, mg
      1. region a:33-60,a:182-345 [134763]
    30. 2g83
      automatically matched to d1kjya2
      complexed with alf, gdp, mg
      1. region b:33-60,b:182-345 [134765]
    31. 1fqj
      complexed with alf, gdp, mg
      1. region a:28-60,a:182-344 [32098]
      2. region d:28-60,d:182-342 [32099]
    32. 1got
      species chimera
      complexed with gdp
      1. region a:6-60,a:182-343 [32096]
    33. 1fqk
      species chimera
      complexed with alf, gdp, mg
      1. region a:28-60,a:182-345 [32103]
      2. region c:29-60,c:182-345 [32104]
  3. Mouse (Mus musculus) [TaxId: 10090] [142225] (6)
    SQ P21279 38-66,184-354! SQ P27600 53-81,204-370! SQ P27601 47-75,202-372
    1. 1zcb
      G alpha i/13
      complexed with gdp
      1. region a:47-75,a:202-372 [124902]
    2. 2bcj
      G alpha-q
      complexed with ace, alf, gdp, mg; mutant
      1. region q:38-66,q:184-354 [128292]
    3. 1zca
      G alpha i/12
      complexed with alf, gdp, mg
      1. region a:54-82,a:205-371 [124898]
    4. 1zca
      automatically matched to 1ZCA A:54-82,A:205-371
      complexed with alf, gdp, mg
      1. region b:54-82,b:205-370 [124900]
    5. 2rgn
      automatically matched to d2bcjq2
      complexed with alf, gdp, mg
      1. region a:38-66,a:184-354 [152013]
    6. 2rgn
      automatically matched to d2bcjq2
      complexed with alf, gdp, mg
      1. region d:38-66,d:184-354 [152016]
  4. Homo sapiens [TaxId: 9606] [159560] (4)
    1. 2om2
      automatically matched to d1kjya2
      complexed with gdp, mg
      1. region a:30-60,a:182-349 [148862]
    2. 2om2
      automatically matched to d1kjya2
      complexed with gdp, mg
      1. region c:1030-1060,c:1182-1347 [148864]
    3. 2ebc
      automatically matched to d1agra2
      complexed with gdp; mutant
      1. region a:9-60,a:182-354 [146765]
    4. 2pz2
      automatically matched to d1agra2
      complexed with gdp, so4; mutant
      1. region a:11-60,a:182-354 [149961]
23. Elongation factor Tu (EF-Tu), N-terminal (G) domain [52626]
  1. Escherichia coli [TaxId: 562] [52627] (10)
    SQ P02990
    1. 1efc
      complexed with gdp, mg
      1. region a:8-204 [32113]
      2. region b:8-204 [32114]
    2. 1dg1
      1. region g:9-204 [32117]
      2. region h:9-204 [32118]
    3. 1efu
      1. region a:9-204 [32115]
      2. region c:9-204 [32116]
    4. 2bvn
      automatically matched to d1ob2a3
      complexed with enx, gnp, mg
      1. region a:9-204 [129284]
    5. 2bvn
      automatically matched to d1ob2a3
      complexed with enx, gnp, mg
      1. region b:9-204 [129287]
    6. 1d8t
      complexed with ace, gdp, gea, mg
      1. region a:3-204 [32119]
      2. region b:9-204 [32120]
    7. 2fx3
      automatically matched to d1ob2a3
      complexed with gdp, mg
      1. region a:9-204 [134273]
    8. 1etu
      one domain only
      complexed with gdp, mg
      1. region a:5-200 [64737]
    9. 1efm
      one domain only
      complexed with gdp, mg
      1. region a:12-190 [64732]
    10. 1ob2
      complexed with 2mg, 5mc, 7mg, gnp, h2u, kir, m2g, mad, mg, omc, omg, pha, psu, suc, yg
      1. region a:1-204 [103902]
  2. Thermus aquaticus [TaxId: 271] [52628] (4)
    1. 1b23
      complexed with aac, gnp, h2u, mg, mia, psu, s4u, so4
      1. region p:1-212 [32124]
    2. 1eft
      complexed with gnp, mg
      1. region a:1-212 [32123]
    3. 1ttt
      protein/tRNA complex; complexed with 1ma, 2mg, 5mc, 5mu, 7mg, gnp, h2u, m2g, mg, omc, omg, psu, yg
      1. region a:1-212 [32125]
      2. region b:1-212 [32126]
      3. region c:1-212 [32127]
    4. 1tui
      complexed with gdp, mg
      1. region a:9-212 [32128]
      2. region b:9-212 [32129]
      3. region c:9-212 [32130]
  3. Thermus thermophilus [TaxId: 274] [52629] (9)
    1. 2c78
      automatically matched to d1aipa3
      complexed with gnp, mg, pul
      1. region a:9-212 [130039]
    2. 2c77
      automatically matched to d1aipa3
      complexed with gea, gnp, mg, peg
      1. region a:9-212 [130036]
    3. 1exm
      complexed with gnp, mg
      1. region a:3-212 [32131]
    4. 1ha3
      complexed with bme, gdp, mau, mg
      1. region a:3-212 [60871]
      2. region b:3-212 [60874]
    5. 1aip
      1. region a:9-212 [32132]
      2. region b:9-212 [32133]
      3. region e:9-212 [32134]
      4. region f:9-212 [32135]
    6. 1ob5
      automatically matched to d1aipa3
      complexed with 2mg, 5mc, 5mu, 7mg, c, enx, gnp, h2u, m2g, mad, mg, omc, omg, pha, psu, yg
      1. region a:9-212 [118693]
    7. 1ob5
      automatically matched to d1aipa3
      complexed with 2mg, 5mc, 5mu, 7mg, c, enx, gnp, h2u, m2g, mad, mg, omc, omg, pha, psu, yg
      1. region c:9-212 [118696]
    8. 1ob5
      automatically matched to d1aipa3
      complexed with 2mg, 5mc, 5mu, 7mg, c, enx, gnp, h2u, m2g, mad, mg, omc, omg, pha, psu, yg
      1. region e:9-212 [118699]
    9. 1zc8
      automatically matched to d1aipa3
      complexed with du
      1. region y:9-212 [124895]
  4. Cow (Bos taurus), mitochondrial [TaxId: 9913] [52630] (2)
    SQ P49410 56-452
    1. 1d2e
      complexed with gdp, mo2, mo4
      1. region a:55-250 [32136]
      2. region b:55-250 [32137]
      3. region c:55-250 [32138]
      4. region d:55-250 [32139]
    2. 1xb2
      1. region a:56-250 [115056]
24. Elongation factor eEF-1alpha, N-terminal (G) domain [52631]
  eukaryotic and archaeal homologue of EF-Tu
  1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [52632] (6)
    1. 1f60
      1. region a:2-240 [32140]
    2. 2b7c
      automatically matched to d1f60a3
      mutant
      1. region a:5-240 [128032]
    3. 1g7c
      complexed with 5gp
      1. region a:4-240 [32141]
    4. 1ije
      complexed with gdp
      1. region a:4-240 [62487]
    5. 2b7b
      automatically matched to d1f60a3
      complexed with gdp; mutant
      1. region a:2-240 [128029]
    6. 1ijf
      complexed with gdp, mg
      1. region a:2-240 [62491]
  2. Archaeon Sulfolobus solfataricus [TaxId: 2287] [69487] (2)
    SQ P35021
    1. 1jny
      complexed with gdp
      1. region a:4-227 [66984]
      2. region b:4-227 [66987]
    2. 1skq
      complexed with gdp, mg
      1. region a:4-227 [105680]
      2. region b:4-227 [105683]
25. Elongation factor G (EF-G), N-terminal (G) domain [52633]
  has internal nucleotide exchange factor built in as an insertion subdomain
  1. Thermus thermophilus [TaxId: 274] [52634] (9)
    residues 160-252 comprise insertion subdomain
    1. 2bv3
      automatically matched to d1dar_2
      complexed with gnp, mg; mutant
      1. region a:7-282 [129238]
    2. 2efg
      complexed with gdp
      1. region a:7-282 [32143]
    3. 2bm0
      automatically matched to d1dar_2
      complexed with gdp, mg; mutant
      1. region a:4-282 [128749]
    4. 1fnm
      complexed with gdp, mg; mutant
      1. region a:6-282 [32144]
    5. 1dar
      complexed with gdp
      1. region a:1-282 [32142]
    6. 2bm1
      automatically matched to d1dar_2
      complexed with gdp, mg; mutant
      1. region a:4-282 [128754]
    7. 1efg
      complexed with gdp
      1. region a:1-282 [32146]
    8. 1elo
      1. region a:5-282 [32145]
    9. 1ktv
      1. region a:5-282 [91028]
      2. region b:5-282 [91032]
  2. Thermus thermophilus, EF-G-2 [TaxId: 274] [142226] (2)
    SQ Q5SI76 1-267
    TTHA1498
    1. 2dy1
      automatically matched to d1wdta2
      complexed with gtp, mg
      1. region a:8-274 [146608]
    2. 1wdt
      complexed with gtp, mg
      1. region a:8-274 [120912]
26. Elongation factor 2 (eEF-2), N-terminal (G) domain [82404]
  1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [82405] (22)
    SQ P32324
    1. 1n0u
      complexed with so1
      1. region a:3-343 [79758]
    2. 1u2r
      complexed with apr, dde, gdp, mg, so1
      1. region a:3-343 [107618]
    3. 1n0v
      1. region c:2-343 [79763]
      2. region d:2-343 [79768]
    4. 2npf
      automatically matched to d1n0vc2
      complexed with gdp, mou
      1. region a:3-343 [138433]
    5. 2npf
      automatically matched to d1n0vc2
      complexed with gdp, mou
      1. region b:3-343 [138438]
    6. 1zm9
      automatically matched to d1n0vc2
      complexed with dde, p34
      1. region a:2-343 [125337]
    7. 1zm9
      automatically matched to d1n0vc2
      complexed with dde, p34
      1. region c:2-343 [125343]
    8. 1zm9
      automatically matched to d1n0vc2
      complexed with dde, p34
      1. region e:2-343 [125349]
    9. 1zm4
      automatically matched to d1n0vc2
      complexed with dde, tad
      1. region a:2-343 [125317]
    10. 1zm4
      automatically matched to d1n0vc2
      complexed with dde, tad
      1. region c:2-343 [125323]
    11. 1zm4
      automatically matched to d1n0vc2
      complexed with dde, tad
      1. region e:2-343 [125329]
    12. 2e1r
      automatically matched to d1n0vc2
      complexed with gdp, sod
      1. region a:2-343 [131967]
    13. 1zm3
      automatically matched to d1n0vc2
      complexed with dde
      1. region a:2-343 [125299]
    14. 1zm3
      automatically matched to d1n0vc2
      complexed with dde
      1. region c:2-343 [125305]
    15. 1zm3
      automatically matched to d1n0vc2
      complexed with dde
      1. region e:2-343 [125311]
    16. 1zm2
      automatically matched to d1n0vc2
      complexed with apr, dde
      1. region a:2-343 [125281]
    17. 1zm2
      automatically matched to d1n0vc2
      complexed with apr, dde
      1. region c:2-343 [125287]
    18. 1zm2
      automatically matched to d1n0vc2
      complexed with apr, dde
      1. region e:2-343 [125293]
    19. 2p8z
      automatically matched to d1n0vc2
      complexed with apr, dde, gnp, so1
      1. region t:3-343 [139552]
    20. 2p8x
      automatically matched to d1n0vc2
      complexed with apr, dde, gnp
      1. region t:3-343 [139542]
    21. 2p8y
      automatically matched to d1n0vc2
      complexed with apr, dde, gdp, so1
      1. region t:3-343 [139547]
    22. 2p8w
      automatically matched to d1n0vc2
      complexed with gnp
      1. region t:3-343 [139537]
27. Initiation factor IF2/eIF5b, N-terminal (G) domain [52635]
  1. Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262] [52636] (3)
    1. 1g7s
      complexed with gdp
      1. region a:1-227 [32147]
    2. 1g7t
      complexed with gnp, mg
      1. region a:1-227 [32148]
    3. 1g7r
      1. region a:1-227 [32149]
28. Initiation factor eIF2 gamma subunit, N-terminal (G) domain [75204]
  includes rubredoxin-like zinc finger insert domain, res. 56-83, similar that of the Nop10-like family (scop_fa 144211)
  1. Archaeon Pyrococcus abyssi [TaxId: 29292] [75205] (5)
    1. 1kk1
      complexed with gnp, mg, zn; mutant
      1. region a:6-200 [72636]
    2. 1kk3
      complexed with gdp, mg, zn
      1. region a:6-200 [72642]
    3. 1kjz
      complexed with zn; mutant
      1. region a:6-200 [72630]
    4. 1kk0
      complexed with mse, zn
      1. region a:6-200 [72633]
    5. 1kk2
      complexed with gdp, mg, zn; mutant
      1. region a:6-200 [72639]
  2. Archaeon Methanococcus jannaschii [TaxId: 2190] [102365] (1)
    1. 1s0u
      structural genomics
      complexed with zn
      1. region a:34-229 [98304]
  3. Sulfolobus solfataricus [TaxId: 2287] [142227] (6)
    SQ Q980A5 2-206
    1. 2qn6
      automatically matched to d2ahoa3
      complexed with gdp, mg
      1. region a:2-206 [150913]
    2. 2pmd
      automatically matched to d2ahoa3
      complexed with gdp, gnp, ppv
      1. region a:2-206 [149665]
    3. 2pmd
      automatically matched to d2ahoa3
      complexed with gdp, gnp, ppv
      1. region b:2-206 [149668]
    4. 2plf
      automatically matched to d2ahoa3
      1. region a:2-206 [149627]
    5. 2aho
      complexed with gnp, mg, zn
      1. region a:2-206 [126769]
    6. 2qmu
      automatically matched to d2ahoa3
      complexed with gdp, po4, zn
      1. region a:2-206 [150896]
29. GTPase Era, N-terminal domain [52637]
  1. Escherichia coli [TaxId: 562] [52638] (3)
    1. 1ega
      complexed with so4
      1. region a:4-182 [32150]
      2. region b:4-182 [32151]
    2. 1x1l
      automatically matched to d1egaa1
      1. region x:4-182 [121590]
    3. 1x18
      automatically matched to d1egaa1
      complexed with du
      1. region x:4-182 [121577]
  2. Thermus thermophilus [TaxId: 274] [117533] (1)
    SQ Q5SM23
    1. 1wf3
      Structural genomics target
      complexed with gnp, gol, mg
      1. region a:3-180 [114574]
30. Probable tRNA modification GTPase TrmE (MnmE), G domain [102366]
  1. Escherichia coli [TaxId: 562] [102367] (11)
    1. 2gj8
      automatically matched to d1rfla_
      complexed with alf, gdp, k, mg, se
      1. region a:216-376 [135270]
    2. 2gj8
      automatically matched to d1rfla_
      complexed with alf, gdp, k, mg, se
      1. region b:217-376 [135271]
    3. 2gj8
      automatically matched to d1rfla_
      complexed with alf, gdp, k, mg, se
      1. region c:216-376 [135272]
    4. 2gj8
      automatically matched to d1rfla_
      complexed with alf, gdp, k, mg, se
      1. region d:216-376 [135273]
    5. 2gja
      automatically matched to d1rfla_
      complexed with alf, gdp, mg, nh4
      1. region a:216-376 [135278]
    6. 2gja
      automatically matched to d1rfla_
      complexed with alf, gdp, mg, nh4
      1. region b:216-375 [135279]
    7. 2gj9
      automatically matched to d1rfla_
      complexed with alf, gdp, mg, rb
      1. region a:216-376 [135274]
    8. 2gj9
      automatically matched to d1rfla_
      complexed with alf, gdp, mg, rb
      1. region b:217-376 [135275]
    9. 2gj9
      automatically matched to d1rfla_
      complexed with alf, gdp, mg, rb
      1. region c:216-376 [135276]
    10. 2gj9
      automatically matched to d1rfla_
      complexed with alf, gdp, mg, rb
      1. region d:217-376 [135277]
    11. 1rfl
      low-resolution NMR structure
      1. chain a [97384]
31. Probable GTPase Der, N-terminal and middle domains [82406]
  member of EngA subfamily of GTPases; contains two G domains
  1. Thermotoga maritima [TaxId: 2336] [82407] (1)
    1. 1mky
      complexed with gdp, mse, po4
      1. region a:2-172 [79250]
      2. region a:173-358 [79251]
32. Obg GTP-binding protein middle domain [82408]
  1. Bacillus subtilis [TaxId: 1423] [82409] (1)
    1. 1lnz
      complexed with g4p, mg, mse; mutant
      1. region a:158-342 [78113]
      2. region b:158-337 [78115]
  2. Thermus thermophilus [TaxId: 274] [102368] (1)
    TT1381
    1. 1udx
      complexed with act, mpd
      1. region a:157-336 [99229]
33. YchF GTP-binding protein N-terminal domain [82410]
  Member of the Obg family of GTPases; contains an alpha-hairpin insert subdomain
  1. Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896] [82411] (1)
    1. 1ni3
      complexed with mse, so4
      1. region a:11-306 [80531]
  2. Haemophilus influenzae [TaxId: 727] [89666] (1)
    HI0393
    1. 1jal
      structural genomics
      1. region a:1-278 [84138]
      2. region b:1-278 [84140]
34. Probable GTPase EngB [89667]
  1. Escherichia coli [TaxId: 562] [89668] (1)
    1. 1pui
      structural genomics
      complexed with so4
      1. chain a [88292]
      2. chain b [88293]
  2. Bacillus subtilis [TaxId: 1423] [110534] (3)
    SQ P38424
    1. 1svi
      complexed with gdp
      1. chain a [106048]
    2. 1sul
      1. chain a [106023]
      2. chain b [106024]
    3. 1svw
      complexed with gtp, mg
      1. chain a [106056]
      2. chain b [106057]
35. Probable GTPase YlqF [89669]
  naturally occurring circular permutation of G-domain; includes C-terminal all-alpha subdomain
  1. Bacillus subtilis [TaxId: 1423] [89670] (1)
    1. 1puj
      structural genomics
      complexed with gnp, mg
      1. chain a [88294]
36. Interferon-induced guanylate-binding protein 1 (GBP1), N-terminal domain [52639]
  1. Human (Homo sapiens) [TaxId: 9606] [52640] (2)
    1. 1f5n
      complexed with gnp, mg; mutant
      1. region a:7-283 [32152]
    2. 1dg3
      1. region a:6-283 [32153]
37. Dynamin G domain [69488]
  the family common core is decorated with large insertions
  1. Dictyostelium discoideum [TaxId: 44689] [69489] (2)
    1. 1jwy
      complexed with adp, gdp, glc, mg
      1. chain b [67401]
    2. 1jx2
      complexed with adp, glc, mg
      1. chain b [67404]
  2. Rat (Rattus norvegicus) [TaxId: 10116] [142228] (1)
    SQ P21575 6-304
    Dynamin-1
    1. 2aka
      1. region b:6-304 [126914]
38. Eukaryotic peptide chain release factor ERF2, G domain [110535]
  1. Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896] [110536] (3)
    SQ O74718
    1. 1r5b
      1. region a:215-459 [104805]
    2. 1r5n
      complexed with gdp
      1. region a:215-459 [104808]
    3. 1r5o
      complexed with gnp
      1. region a:215-459 [104811]
39. Rab9a [110537]
  1. Dog (Canis familiaris) [TaxId: 9615] [110538] (1)
    SQ P24408
    1. 1s8f
      complexed with bez, cl, gdp, mg, sr
      1. chain a [105370]
      2. chain b [105371]
  2. Human (Homo sapiens) [TaxId: 9606] [110539] (1)
    SQ P51151 2-175 # 100% sequence identity do the dog protein (SQ P24408 2-175)
    1. 1wms
      complexed with gdp
      1. chain a [109414]
      2. chain b [109415]
  3. Mouse (Mus musculus) [TaxId: 10090] [142229] (1)
    SQ Q9R0M6 4-175
    1. 1yzl
      complexed with gnp, mg
      1. region a:4-175 [124282]
40. Rab7 [110540]
  1. Rat (Rattus norvegicus) [TaxId: 10116] [110541] (4)
    SQ P09527
    1. 1vg8
      complexed with gnp, mg
      1. chain a [108606]
      2. chain b [108607]
      3. chain c [108608]
      4. chain d [108609]
    2. 1vg1
      complexed with gdp, mg
      1. chain a [108599]
    3. 1vg0
      complexed with cl, gdp, ger, mg, pg4; mutant
      1. chain b [108598]
    4. 1vg9
      complexed with gdp, k, mg, p33; mutant
      1. chain b [108612]
      2. chain d [108615]
      3. chain f [108618]
      4. chain h [108621]
  2. Human (Homo sapiens) [TaxId: 9606] [142230] (5)
    SQ P51149 7-182
    1. 1t91
      complexed with gtp, mg; mutant
      1. region a:7-182 [119192]
    2. 1t91
      automatically matched to 1T91 A:7-182
      complexed with gtp, mg; mutant
      1. region b:7-182 [119193]
    3. 1t91
      automatically matched to 1T91 A:7-182
      complexed with gtp, mg; mutant
      1. region c:7-182 [119194]
    4. 1t91
      automatically matched to 1T91 A:7-182
      complexed with gtp, mg; mutant
      1. region d:7-182 [119195]
    5. 1yhn
      automatically matched to 1T91 A:7-182
      complexed with gtp, mg; mutant
      1. region a:7-182 [123178]
41. Probable GTPase EngC (YjeQ), C-terminal domain [110542]
  circularly permuted G-domain similar to B. sutilis YlqF; distinct extra C-terminal all-alpha subdomain
  1. Thermotoga maritima [TaxId: 2336] [110543] (1)
    SQ Q9X242 # TM1717
    1. 1u0l
      complexed with gdp, zn
      1. region a:69-293 [107552]
      2. region b:369-593 [107554]
      3. region c:669-893 [107556]
  2. Bacillus subtilis [TaxId: 1423] [117534] (1)
    SQ O34530
    1. 1t9h
      complexed with act, ca, ium, zn
      1. region a:68-298 [112359]
42. GTPase Ytp1 [110544]
  1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [110545] (2)
    SQ P01123
    1. 2bcg
      automatically matched to d1ukvy_
      complexed with gdp, ger, mg, trs; mutant
      1. region y:3-196 [128285]
    2. 1ukv
      complexed with gdp, ger, mg
      1. chain y [107918]
43. Interferon-inducible GTPase [110546]
  G domain is inserted in all-alpha domain
  1. Mouse (Mus musculus) [TaxId: 10090] [110547] (5)
    SQ Q9QZ85 # all-alpha domain (14-68,252-415)
    1. 1tq4
      complexed with gdp, mg; mutant
      1. chain a [107201]
    2. 1tpz
      complexed with edo, gdp, mg, mpd
      1. chain a [107194]
      2. chain b [107195]
    3. 1tqd
      complexed with mes, so4
      1. chain a [107222]
      2. chain b [107223]
    4. 1tq6
      complexed with gnp, mg; mutant
      1. chain a [107202]
    5. 1tq2
      complexed with gnp, mg, mpd
      1. chain a [107199]
      2. chain b [107200]
44. TrmE GTPase domain [117535]
  1. Thermotoga maritima [TaxId: 2336] [117536] (2)
    SQ Q9WYA4
    1. 1xzp
      complexed with so4
      1. region a:212-371 [116255]
    2. 1xzq
      complexed with fon
      1. region a:212-371 [116259]
45. Elongation factor SelB, N-terminal domain [117537]
  1. Methanococcus maripaludis [TaxId: 39152] [117538] (3)
    SQ Q8J307
    1. 1wb1
      complexed with cmh, dxc, gdp, mg, so4
      1. region a:1-179 [114439]
      2. region b:1-179 [114442]
      3. region c:1-179 [114446]
      4. region d:5-179 [114449]
    2. 1wb2
      complexed with cmh, dxc, so4
      1. region a:1-179 [114453]
      2. region b:1-179 [114456]
      3. region c:1-179 [114460]
      4. region d:5-179 [114463]
    3. 1wb3
      complexed with cmh, dxc, gnp, mg, so4
      1. region a:1-179 [114467]
      2. region b:1-179 [114470]
      3. region c:1-179 [114474]
      4. region d:5-179 [114477]
46. Rab23 [142231]
  1. Mouse (Mus musculus) [TaxId: 10090] [142232] (2)
    SQ P35288 8-171
    1. 1z2a
      automatically matched to 1Z22 A:8-171
      complexed with gdp, mg
      1. region a:8-171 [124374]
    2. 1z22
      complexed with gdp, mg
      1. region a:8-171 [124368]
47. Rab18 [142233]
  1. Human (Homo sapiens) [TaxId: 9606] [142234] (1)
    SQ Q9NP72 2-178
    1. 1x3s
      complexed with gnp, mg
      1. region a:2-178 [121670]
48. Rab31 [142235]
  1. Human (Homo sapiens) [TaxId: 9606] [142236] (1)
    SQ Q13636 3-167
    1. 2fg5
      complexed with gnp, mg
      1. region a:3-167 [133401]
49. Rab11b [142237]
  1. Human (Homo sapiens) [TaxId: 9606] [142238] (2)
    SQ Q15907 7-181
    1. 2f9l
      complexed with gdp, mg
      1. region a:8-182 [133166]
    2. 2f9m
      automatically matched to 2F9L A:8-182
      complexed with gnp, mg, ni
      1. region a:8-182 [133167]
50. Rab30 [142239]
  1. Human (Homo sapiens) [TaxId: 9606] [142240] (1)
    SQ Q15771 5-175
    1. 2ew1
      complexed with gnp, mg
      1. region a:4-174 [132446]
51. Rab1a [142241]
  1. Human (Homo sapiens) [TaxId: 9606] [142242] (1)
    SQ P62820 7-175
    1. 2fol
      complexed with gdp, mg, unx
      1. region a:5-173 [133883]
52. RhoB [142243]
  1. Human (Homo sapiens) [TaxId: 9606] [142244] (1)
    SQ P62745 4-185
    1. 2fv8
      complexed with gdp
      1. region a:4-184 [134199]
53. RhoC [142245]
  1. Human (Homo sapiens) [TaxId: 9606] [142246] (2)
    SQ P08134 1-179
    1. 1z2c
      complexed with gnp, mg; mutant
      1. region a:1-179 [124376]
    2. 1z2c
      automatically matched to 1Z2C A:1-179
      complexed with gnp, mg; mutant
      1. region c:1-179 [124378]
54. Rab4a [142247]
  1. Human (Homo sapiens) [TaxId: 9606] [142248] (5)
    SQ P20338 2-172! SQ P20338 4-172! SQ P20338 4-184
    1. 2bme
      automatically matched to 2BMD A:6-186
      complexed with bme, gnp, mg, trs
      1. region a:6-179 [128790]
    2. 2bmd
      complexed with gdp, gol
      1. region a:6-186 [128789]
    3. 1yu9
      complexed with gnp, mg, so4
      1. region a:2-172 [124045]
    4. 1z0k
      complexed with gtp, mes, mg
      1. region a:4-172 [124321]
    5. 1z0k
      automatically matched to 1Z0K A:4-172
      complexed with gtp, mes, mg
      1. region c:5-172 [124323]
55. Centaurin gamma 1, G domain [142249]
  1. Human (Homo sapiens) [TaxId: 9606] [142250] (1)
    SQ Q99490 402-576
    1. 2bmj
      1. region a:66-240 [128797]
56. GTP-binding protein PH0525 [142251]
  Member of the Obg family of GTPases; contains an alpha-hairpin insert subdomain
  1. Pyrococcus horikoshii [TaxId: 53953] [142252] (1)
    SQ O58261 1-319
    1. 1wxq
      1. region a:1-319 [121406]
57. Rab-22a [142253]
  1. Mouse (Mus musculus) [TaxId: 10090] [142254] (2)
    SQ P35285 2-167! SQ P35285 2-168
    1. 1z0j
      complexed with gol, gtp, mg, trs; mutant
      1. region a:2-168 [124319]
    2. 1yvd
      complexed with gnp, mg
      1. region a:2-167 [124095]
58. Rac3 [142255]
  1. Human (Homo sapiens) [TaxId: 9606] [142256] (2)
    SQ P60763 3-177
    1. 2c2h
      complexed with ca, gdp, mg, so4; mutant
      1. region a:3-177 [129668]
    2. 2c2h
      automatically matched to 2C2H A:3-177
      complexed with ca, gdp, mg, so4; mutant
      1. region b:3-177 [129669]
59. GTP-binding protein engB [142257]
  1. Pyrococcus horikoshii [TaxId: 53953] [142258] (3)
    SQ O57939 28-211
    PH0200
    1. 2cxx
      complexed with gdp
      1. region a:2-185 [131013]
    2. 2cxx
      automatically matched to 2CXX A:2-185
      complexed with gdp
      1. region b:2-185 [131014]
    3. 2cxx
      automatically matched to 2CXX A:2-185
      complexed with gdp
      1. region c:2-185 [131015]
60. Rab26 [142259]
  1. Human (Homo sapiens) [TaxId: 9606] [142260] (1)
    SQ Q9ULW5 58-227
    1. 2g6b
      complexed with gnp, mg, unx
      1. region a:58-227 [134701]
61. RhoQ [142261]
  1. Human (Homo sapiens) [TaxId: 9606] [142262] (2)
    SQ P17081 1-185
    1. 2atx
      complexed with gnp, mg
      1. region a:9-193 [127315]
    2. 2atx
      automatically matched to 2ATX A:9-193
      complexed with gnp, mg
      1. region b:9-193 [127316]
62. Rab27b [142263]
  1. Human (Homo sapiens) [TaxId: 9606] [142264] (2)
    SQ O00194 4-189
    1. 2f7s
      complexed with gdp, mg
      1. region a:5-190 [133104]
    2. 2f7s
      automatically matched to 2F7S A:5-190
      complexed with gdp, mg
      1. region b:6-189 [133105]
63. Rab2a [142265]
  1. Human (Homo sapiens) [TaxId: 9606] [142266] (4)
    SQ P61019 2-170
    1. 1z0a
      complexed with gdp, mg
      1. region a:2-170 [124307]
    2. 1z0a
      automatically matched to 1Z0A A:2-170
      complexed with gdp, mg
      1. region b:3-169 [124308]
    3. 1z0a
      automatically matched to 1Z0A A:2-170
      complexed with gdp, mg
      1. region c:2-170 [124309]
    4. 1z0a
      automatically matched to 1Z0A A:2-170
      complexed with gdp, mg
      1. region d:3-170 [124310]
64. di-Ras2 [142267]
  1. Human (Homo sapiens) [TaxId: 9606] [142268] (2)
    SQ Q96HU8 6-176
    1. 2erx
      complexed with gdp, mg, po4
      1. region a:6-176 [132304]
    2. 2erx
      automatically matched to 2ERX A:6-176
      complexed with gdp, mg, po4
      1. region b:6-176 [132305]
65. Sulfate adenylate transferase subunit cysN/C, EF-Tu domain G-like domain [142269]
  1. Pseudomonas syringae pv. tomato [TaxId: 323] [142270] (1)
    SQ Q87WW1 16-237
    1. 1zun
      complexed with ags, gdp, mg, na
      1. region b:16-237 [125679]
66. Rab14 [142271]
  1. Human (Homo sapiens) [TaxId: 9606] [142272] (2)
    SQ P61106 7-174
    1. 1z0f
      automatically matched to 2AED A:8-175
      complexed with gdp, mg
      1. region a:8-173 [124313]
    2. 2aed
      complexed with gdp, mg, unx
      1. region a:8-175 [126619]
67. r-Ras [142273]
  1. Human (Homo sapiens) [TaxId: 9606] [142274] (1)
    SQ P10301 24-196
    1. 2fn4
      complexed with gdp, mg
      1. region a:24-196 [133806]
68. GTP-binding protein RheB [142275]
  1. Human (Homo sapiens) [TaxId: 9606] [142276] (3)
    SQ Q15382 3-169
    1. 1xtq
      complexed with gdp, mg
      1. region a:3-169 [122297]
    2. 1xtr
      automatically matched to 1XTQ A:3-169
      complexed with gnp, gol, mg
      1. region a:3-169 [122298]
    3. 1xts
      automatically matched to 1XTQ A:3-169
      complexed with gtp, mg
      1. region a:3-169 [122299]
69. di-Ras1 [142277]
  1. Human (Homo sapiens) [TaxId: 9606] [142278] (4)
    SQ O95057 4-176
    1. 2gf0
      complexed with gdp, mg
      1. region a:4-176 [135066]
    2. 2gf0
      automatically matched to 2GF0 A:4-176
      complexed with gdp, mg
      1. region b:4-176 [135067]
    3. 2gf0
      automatically matched to 2GF0 A:4-176
      complexed with gdp, mg
      1. region c:6-176 [135068]
    4. 2gf0
      automatically matched to 2GF0 A:4-176
      complexed with gdp, mg
      1. region d:6-175 [135069]
70. Rab-33b [142279]
  1. Mouse (Mus musculus) [TaxId: 10090] [142280] (2)
    SQ O35963 32-196
    1. 1z06
      complexed with gnp, mg
      1. region a:32-196 [124301]
    2. 2g77
      complexed with af3, gdp, mg; mutant
      1. region b:30-202 [145186]
71. r-Ras2 [142281]
  1. Human (Homo sapiens) [TaxId: 9606] [142282] (2)
    SQ P62070 10-180
    1. 2ery
      complexed with gdp, mg
      1. region a:10-180 [132306]
    2. 2ery
      automatically matched to 2ERY A:10-180
      complexed with gdp, mg
      1. region b:13-180 [132307]
72. Ras-related protein M-Ras (XRas) [142283]
  1. Mouse (Mus musculus) [TaxId: 10090] [142284] (2)
    SQ O08989 10-178
    1. 1x1r
      complexed with gdp, mg
      1. region a:10-178 [121595]
    2. 1x1s
      automatically matched to 1X1R A:10-178
      complexed with gnp, mg
      1. region a:11-178 [121596]
73. Rab21 [142285]
  1. Human (Homo sapiens) [TaxId: 9606] [142286] (10)
    SQ Q9UL25 16-182
    1. 1z08
      complexed with gnp, mg; mutant
      1. region a:17-183 [124303]
    2. 1z08
      automatically matched to 1Z08 A:17-183
      complexed with gnp, mg; mutant
      1. region b:17-183 [124304]
    3. 1z08
      automatically matched to 1Z08 A:17-183
      complexed with gnp, mg; mutant
      1. region c:17-183 [124305]
    4. 1z08
      automatically matched to 1Z08 A:17-183
      complexed with gnp, mg; mutant
      1. region d:18-183 [124306]
    5. 2ot3
      1. region b:17-182 [145726]
    6. 1yzt
      complexed with gnp, mg
      1. region a:17-183 [124288]
    7. 1yzt
      automatically matched to 1YZT A:17-183
      complexed with gnp, mg
      1. region b:17-183 [124289]
    8. 1z0i
      automatically matched to 1YZT A:17-183
      complexed with gdp, mg
      1. region a:17-183 [124318]
    9. 1yzu
      automatically matched to 1YZT A:17-183
      complexed with gnp, mg
      1. region a:17-181 [124290]
    10. 1yzu
      automatically matched to 1YZT A:17-183
      complexed with gnp, mg
      1. region b:17-181 [124291]
74. Rab2b [142287]
  1. Human (Homo sapiens) [TaxId: 9606] [142288] (1)
    SQ Q8WUD1 4-176
    1. 2a5j
      complexed with gdp, mg
      1. region a:9-181 [126175]
75. GTP-binding protein GEM [142289]
  1. Human (Homo sapiens) [TaxId: 9606] [142290] (1)
    SQ P55040 73-244
    1. 2g3y
      complexed with gdp
      1. region a:73-244 [134574]
76. Ras-like estrogen-regulated growth inhibitor, RERG [142291]
  1. Human (Homo sapiens) [TaxId: 9606] [142292] (1)
    SQ Q96A58 5-172
    1. 2atv
      complexed with gdp, mg
      1. region a:5-172 [127308]
77. Rab8a [142293]
  1. Mouse (Mus musculus) [TaxId: 10090] [142294] (2)
    SQ P55258 3-175
    1. 2fu5
      complexed with bme, zn
      1. region c:3-175 [134104]
    2. 2fu5
      automatically matched to 2FU5 C:3-175
      complexed with bme, zn
      1. region d:3-175 [134105]
78. Rad [142295]
  1. Human (Homo sapiens) [TaxId: 9606] [142296] (2)
    SQ P55042 91-258
    1. 2gjs
      complexed with gdp, mg
      1. region a:91-258 [135287]
    2. 2gjs
      automatically matched to 2GJS A:91-258
      complexed with gdp, mg
      1. region b:91-256 [135288]
Motor proteins [52641] (15)
1. Myosin S1, motor domain [52642]
  common fold is interrupted with some all-alpha subdomains
  1. Chicken (Gallus gallus), pectoral muscle [TaxId: 9031] [52643] (4)
    1. 1br2
      complexed with adp, alf, mg
      1. region a:80-789 [32155]
      2. region b:80-789 [32156]
      3. region c:80-789 [32157]
      4. region d:80-789 [32158]
      5. region e:80-789 [32159]
      6. region f:80-789 [32160]
    2. 2mys
      complexed with mg, mly, so4
      1. region a:4-33,a:80-843 [32154]
    3. 1br1
      complexed with adp, alf, mg
      1. region a:2-33,a:80-821 [32161]
      2. region c:2-33,c:80-821 [32162]
      3. region e:2-33,e:80-821 [32163]
      4. region g:2-33,g:80-821 [32164]
    4. 1br4
      complexed with adp, bef, mg
      1. region a:2-33,a:80-821 [32165]
      2. region c:2-33,c:80-821 [32166]
      3. region e:2-33,e:80-821 [32167]
      4. region g:2-33,g:80-821 [32168]
  2. Chicken (Gallus gallus), Va isoform [TaxId: 9031] [102369] (3)
    1. 1w7j
      automatically matched to d1oe9a2
      complexed with adp, bef, mg
      1. region a:63-792 [120689]
    2. 1oe9
      complexed with so4
      1. region a:63-795 [92793]
    3. 1w7i
      automatically matched to d1oe9a2
      complexed with adp
      1. region a:63-795 [120686]
  3. Bay scallop (Aequipecten irradians) [TaxId: 31199] [52644] (11)
    SQ P24733 3-836 ! SQ P24733 6-837
    1. 1kk8
      complexed with adp, bef, ca, gol, mg; mutant
      1. region a:1-28,a:77-837 [77429]
    2. 1qvi
      complexed with adp, ca, mg, vo4
      1. region a:6-28,a:77-837 [96428]
    3. 1b7t
      complexed with adp, ca, mg
      1. region a:5-28,a:77-835 [32169]
    4. 1sr6
      complexed with ca, mg, so4
      1. region a:6-28,a:77-837 [105954]
    5. 1s5g
      complexed with adp, ca, mg, so4
      1. region a:3-28,a:77-836 [105264]
    6. 1l2o
      complexed with adp, ca, mg, pdm
      1. region a:5-28,a:77-835 [77659]
    7. 1kk7
      complexed with ca, mg, so4
      1. region a:5-28,a:77-837 [77425]
    8. 1kqm
      complexed with anp, ca, mg
      1. region a:5-28,a:77-835 [77489]
    9. 1kwo
      complexed with ags, ca, mg, pdm
      1. region a:5-28,a:77-835 [77570]
    10. 1dfl
      complexed with adp, ca, mg, vo4
      1. region a:5-28,a:77-835 [32171]
      2. region b:5-28,b:77-835 [32172]
    11. 1dfk
      complexed with ca
      1. region a:6-28,a:77-835 [32170]
  4. Dictyostelium discoideum [TaxId: 44689] [52645] (18)
    1. 1lvk
      complexed with bef, mg, mnt; mutant
      1. region a:2-33,a:80-759 [32173]
    2. 1vom
      complexed with adp, mg, vo4
      1. region a:2-33,a:80-747 [32174]
    3. 1d0x
      1. region a:2-33,a:80-759 [32180]
    4. 1d0y
      1. region a:2-33,a:80-759 [32178]
    5. 1d0z
      1. region a:2-33,a:80-759 [32181]
    6. 1mmd
      complexed with adp, bef, mg; mutant
      1. region a:2-33,a:80-759 [32175]
    7. 1jwy
      complexed with adp, gdp, glc, mg
      1. region a:13-30,a:80-776 [67400]
    8. 1d1b
      1. region a:2-33,a:80-759 [32182]
    9. 1fmv
      complexed with cl
      1. region a:2-33,a:80-759 [32177]
    10. 1jx2
      complexed with adp, glc, mg
      1. region a:13-30,a:80-776 [67403]
    11. 1mmg
      complexed with ags, mg; mutant
      1. region a:2-33,a:80-759 [32176]
    12. 1mmn
      complexed with anp, mg; mutant
      1. region a:2-33,a:80-759 [32179]
    13. 1d1c
      1. region a:2-33,a:80-759 [32185]
    14. 1d1a
      1. region a:2-33,a:80-759 [32186]
    15. 1fmw
      complexed with atp, mg
      1. region a:2-33,a:80-759 [32183]
    16. 1mma
      complexed with adp, mg; mutant
      1. region a:2-33,a:80-759 [32184]
    17. 1mne
      complexed with mg, pop; mutant
      1. region a:2-33,a:80-759 [32187]
    18. 1mnd
      complexed with adp, alf, mg; mutant
      1. region a:2-33,a:80-690 [32188]
  5. Dictyostelium discoideum, class-I myosin MyoE [TaxId: 44689] [75206] (1)
    lacks the SH3-like insert domain
    1. 1lkx
      complexed with adp, mg, vo4
      1. chain a [73981]
      2. chain b [73982]
      3. chain c [73983]
      4. chain d [73984]
2. Kinesin [52646]
  1. Human (Homo sapiens) [TaxId: 9606] [52647] (2)
    1. 1bg2
      complexed with act, adp, mg
      1. chain a [32189]
    2. 1mkj
      complexed with adp, mg, so4
      1. chain a [79239]
  2. Rat (Rattus norvegicus) [TaxId: 10116] [52648] (2)
    1. 2kin
      complexed with adp, so4; mutant
      1. chain a,b [32190]
    2. 3kin
      complexed with adp
      1. chain a,b [32191]
      2. chain c,d [32192]
  3. Mouse (Mus musculus), kif1a [TaxId: 10090] [64017] (12)
    SQ P33173 3-355
    1. 2zfi
      automatically matched to d1vfva_
      complexed with adp, mg
      1. region a:4-352 [154414]
    2. 1vfv
      complexed with anp, mg
      1. chain a [108592]
    3. 1i6i
      complexed with acp, mg, trs; mutant
      1. chain a [61844]
    4. 1i5s
      complexed with adp, mg; mutant
      1. chain a [61822]
    5. 1vfw
      complexed with anp, mg
      1. chain a [108593]
    6. 1vfz
      complexed with adp, mg, vo4
      1. chain a [108595]
    7. 2zfm
      automatically matched to d1vfva_
      complexed with adp
      1. region a:4-352 [154418]
    8. 1vfx
      complexed with adp, af3, mg, trs
      1. chain a [108594]
    9. 2zfl
      automatically matched to d1vfva_
      complexed with adp
      1. region a:4-352 [154417]
    10. 2zfj
      automatically matched to d1vfva_
      complexed with adp, mg
      1. region a:5-352 [154415]
    11. 2zfk
      automatically matched to d1vfva_
      complexed with adp, mg, trs
      1. region a:6-352 [154416]
    12. 2hxf
      automatically matched to d1i6ia_
      complexed with anp, gdp, gtp, mg, ta1; mutant
      1. region c:3-361 [136842]
  4. Human (Homo sapiens), mitotic kinesin eg5 [TaxId: 9606] [64018] (34)
    1. 1x88
      automatically matched to d1q0bb_
      complexed with adp, mg, nat
      1. region a:18-362 [121797]
    2. 1x88
      automatically matched to d1q0bb_
      complexed with adp, mg, nat
      1. region b:18-362 [121798]
    3. 1q0b
      complexed with adp, mg, nat
      1. chain a [95502]
      2. chain b [95503]
    4. 2pg2
      automatically matched to d1q0bb_
      complexed with adp, k01, mg
      1. region a:18-362 [139688]
    5. 2pg2
      automatically matched to d1q0bb_
      complexed with adp, k01, mg
      1. region b:18-362 [139689]
    6. 1ii6
      complexed with adp, mg, no3
      1. chain a [62413]
      2. chain b [62414]
    7. 2gm1
      automatically matched to d1q0bb_
      complexed with 2az, adp, mg
      1. region a:18-362 [135350]
    8. 2gm1
      automatically matched to d1q0bb_
      complexed with 2az, adp, mg
      1. region b:18-362 [135351]
    9. 2gm1
      automatically matched to d1q0bb_
      complexed with 2az, adp, mg
      1. region d:18-362 [135352]
    10. 2gm1
      automatically matched to d1q0bb_
      complexed with 2az, adp, mg
      1. region e:18-362 [135353]
    11. 2uym
      automatically matched to d1q0bb_
      complexed with adp, k03, mg
      1. region a:18-362 [140037]
    12. 2uym
      automatically matched to d1q0bb_
      complexed with adp, k03, mg
      1. region b:18-362 [140038]
    13. 2fky
      automatically matched to d1q0bb_
      complexed with adp, mg, n2t
      1. region a:18-362 [133686]
    14. 2fky
      automatically matched to d1q0bb_
      complexed with adp, mg, n2t
      1. region b:18-362 [133687]
    15. 2uyi
      automatically matched to d1q0bb_
      complexed with adp, k02, mg
      1. region a:18-362 [140035]
    16. 2uyi
      automatically matched to d1q0bb_
      complexed with adp, k02, mg
      1. region b:18-362 [140036]
    17. 2fme
      automatically matched to d1q0bb_
      complexed with 3qc, adp, mg
      1. region a:18-362 [133771]
    18. 2fme
      automatically matched to d1q0bb_
      complexed with 3qc, adp, mg
      1. region b:18-362 [133772]
    19. 2fl6
      automatically matched to d1q0bb_
      complexed with adp, mg, n5t
      1. region a:18-362 [133707]
    20. 2fl6
      automatically matched to d1q0bb_
      complexed with adp, mg, n5t
      1. region b:18-362 [133708]
    21. 2g1q
      automatically matched to d1q0bb_
      complexed with adp, mg, n9h
      1. region a:18-362 [134521]
    22. 2g1q
      automatically matched to d1q0bb_
      complexed with adp, mg, n9h
      1. region b:18-362 [134522]
    23. 2fl2
      automatically matched to d1q0bb_
      complexed with adp, mg, n4t
      1. region a:18-362 [133704]
    24. 2fl2
      automatically matched to d1q0bb_
      complexed with adp, mg, n4t
      1. region b:18-362 [133705]
    25. 3cjo
      automatically matched to d1q0bb_
      complexed with adp, k30, mg
      1. region a:18-362 [156700]
    26. 3cjo
      automatically matched to d1q0bb_
      complexed with adp, k30, mg
      1. region b:18-362 [156701]
    27. 1yrs
      automatically matched to d1q0bb_
      complexed with adp, l47, mg
      1. region a:18-362 [123939]
    28. 1yrs
      automatically matched to d1q0bb_
      complexed with adp, l47, mg
      1. region b:18-362 [123940]
    29. 2q2y
      automatically matched to d1q0bb_
      complexed with adp, mg, mkr
      1. region a:18-362 [150024]
    30. 2q2y
      automatically matched to d1q0bb_
      complexed with adp, mg, mkr
      1. region b:18-362 [150025]
    31. 2ieh
      automatically matched to d1q0bb_
      complexed with adp, cl, k, mg, moy, pg4
      1. region a:18-362 [137309]
    32. 2ieh
      automatically matched to d1q0bb_
      complexed with adp, cl, k, mg, moy, pg4
      1. region b:18-362 [137310]
    33. 2q2z
      automatically matched to d1q0bb_
      complexed with adp, mg, mkk
      1. region a:18-362 [150026]
    34. 2q2z
      automatically matched to d1q0bb_
      complexed with adp, mg, mkk
      1. region b:18-362 [150027]
  5. Mouse (Mus musculus), kif2c [TaxId: 10090] [102370] (2)
    1. 1v8k
      complexed with anp, mg
      1. chain a [100510]
    2. 1v8j
      complexed with adp, mg
      1. chain a [100509]
  6. Neurospora crassa [TaxId: 5141] [69490] (1)
    1. 1goj
      complexed with adp, mg
      1. chain a [65419]
  7. Malaria parasite (Plasmodium falciparum) [TaxId: 5833] [102371] (1)
    1. 1ry6
      complexed with so4
      1. chain a [98090]
3. Kinesin motor Ncd (non-claret disjunctional) [52649]
  contains coiled-coil neck
  1. Fruit fly (Drosophila melanogaster) [TaxId: 7227] [52650] (3)
    1. 2ncd
      complexed with adp, so4
      1. chain a [32193]
    2. 1n6m
      complexed with adp, mg; mutant
      1. chain a [91688]
      2. chain b [91689]
    3. 1cz7
      1. chain a [32194]
      2. chain b [32195]
      3. chain c [32196]
      4. chain d [32197]
  2. Baker's yeast (Saccharomyces cerevisiae), Kar [TaxId: 4932] [52651] (5)
    kinesin-like protein
    1. 1f9v
      complexed with adp, mg; mutant
      1. chain a [59745]
    2. 1f9t
      complexed with adp, mg; mutant
      1. chain a [59743]
    3. 1f9u
      complexed with adp, mg; mutant
      1. chain a [59744]
    4. 3kar
      complexed with adp, mg; mutant
      1. chain a [32198]
    5. 1f9w
      complexed with adp, mg; mutant
      1. chain a [59746]
      2. chain b [59747]
4. Kinesin heavy chain-like protein [110548]
  1. Potato (Solanum tuberosum) [TaxId: 4113] [110549] (5)
    SQ Q41460 884-1252
    1. 1sdm
      complexed with adp, mg
      1. chain a [105438]
    2. 3cob
      automatically matched to d1sdma_
      complexed with adp, mg
      1. region a:889-1252 [156855]
    3. 3cob
      automatically matched to d1sdma_
      complexed with adp, mg
      1. region c:889-1252 [156856]
    4. 3cnz
      automatically matched to d1sdma_
      complexed with adp, mg
      1. region a:889-1252 [156853]
    5. 3cnz
      automatically matched to d1sdma_
      complexed with adp, mg
      1. region b:889-1252 [156854]
Nitrogenase iron protein-like [52652] (29)
core: parallel beta-sheet of 7 strands; order 3241567
1. Dethiobiotin synthetase [52653]
  1. Escherichia coli [TaxId: 562] [52654] (13)
    1. 1byi
      1. chain a [32199]
    2. 1dak
      complexed with adp, dpp, mg, po4
      1. chain a [32203]
    3. 1dts
      1. chain a [32200]
    4. 1dai
      complexed with dsd
      1. chain a [32202]
    5. 1dah
      complexed with acp, dnn, mn
      1. chain a [32201]
    6. 1dad
      complexed with adp
      1. chain a [32204]
    7. 1dae
      complexed with ikt
      1. chain a [32205]
    8. 1dag
      complexed with acp, dsd
      1. chain a [32206]
    9. 1daf
      complexed with adp, ca, dsd
      1. chain a [32207]
    10. 1bs1
      complexed with adp, daf, ium
      1. chain a [32208]
    11. 1dbs
      complexed with so4
      1. chain a [32209]
    12. 1dam
      complexed with adp, cyc, ium, pho
      1. chain a [32210]
    13. 1a82
      complexed with atp, dnn, mg
      1. chain a [32211]
2. Adenylosuccinate synthetase, PurA [52655]
  common fold is interrupted by an all-alpha subdomain, residues 100-200
  1. Escherichia coli [TaxId: 562] [52656] (24)
    1. 1qf5
      1. chain a [32212]
    2. 2gcq
      automatically matched to d1adea_
      complexed with doi, gdp, had, mg
      1. region a:1-431 [134993]
    3. 1qf4
      1. chain a [32215]
    4. 1ade
      1. chain a [32213]
      2. chain b [32214]
    5. 1cib
      complexed with gdp, hda, imp, mg, no3
      1. chain a [32216]
    6. 1cg3
      complexed with gdp, hda, imo, mg; mutant
      1. chain a [32219]
    7. 1cg1
      complexed with gdp, hda, imo, mg; mutant
      1. chain a [32223]
    8. 1hoo
      complexed with gnh, gnp
      1. chain a [32217]
      2. chain b [32218]
    9. 1cg0
      complexed with gdp, hda, imo, mg
      1. chain a [32220]
    10. 1ch8
      1. chain a [32226]
    11. 1son
      complexed with amp, bme
      1. chain a [32227]
    12. 1kkf
      complexed with dpo, had, imp, mg
      1. chain a [72644]
    13. 1hon
      complexed with gnh
      1. chain a [32221]
      2. chain b [32222]
    14. 1soo
      complexed with bme, hnp, na, so4
      1. chain a [32229]
    15. 1hop
      complexed with gcp
      1. chain a [32224]
      2. chain b [32225]
    16. 1cg4
      complexed with gdp, imo, mg; mutant
      1. chain a [32228]
    17. 1gim
      complexed with gdp, had, imp, mg, no3
      1. chain a [32230]
    18. 1kkb
      complexed with had, imp
      1. chain a [72643]
    19. 1juy
      complexed with gdp, h5p, hda, mg, pi
      1. chain a [32235]
    20. 1adi
      1. chain a [32233]
      2. chain b [32234]
    21. 1nht
      complexed with gdp, had, mg, spg
      1. chain a [32232]
    22. 1ksz
      complexed with gdp, had, mg, pgs
      1. chain a [32231]
    23. 1kjx
      complexed with imp
      1. chain a [72623]
    24. 1gin
      complexed with gdp, had, imp, mg, no3
      1. chain a [32236]
  2. Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702] [52657] (1)
    1. 1dj2
      complexed with gdp
      1. chain a [32237]
      2. chain b [32238]
  3. Bread wheat (Triticum aestivum) [TaxId: 4565] [52658] (1)
    1. 1dj3
      complexed with gdp
      1. chain a [32239]
      2. chain b [32240]
  4. Mouse (Mus musculus) [TaxId: 10090] [69491] (9)
    1. 1iwe
      complexed with act, imp, mg
      1. chain a [71486]
      2. chain b [71487]
    2. 1lny
      complexed with gdp, imo, mg
      1. chain a [74113]
      2. chain b [74114]
    3. 1lon
      complexed with gdp, hda, imo, mg
      1. chain a [74153]
    4. 1loo
      complexed with gtp
      1. chain a [74154]
    5. 2dgn
      automatically matched to d1j4ba_
      complexed with doi, gdp, mg
      1. region a:27-457 [131514]
    6. 1mez
      complexed with 2sa, gdp, mg, so4
      1. chain a [79037]
    7. 1j4b
      1. chain a [66374]
    8. 1mf0
      complexed with amp, gdp, mg, pi
      1. chain a [79038]
    9. 1mf1
      complexed with act, amp
      1. chain a [79039]
  5. Malaria parasite (Plasmodium falciparum) [TaxId: 5833] [102372] (1)
    1. 1p9b
      complexed with gdp, hda, imo, mg, no3
      1. chain a [94385]
3. Formyltetrahydrofolate synthetase [52659]
  modified P-loop; there are many insertions in the common fold
  1. Moorella thermoacetica [TaxId: 1525] [52660] (3)
    1. 1eg7
      complexed with so4
      1. chain a [32241]
      2. chain b [32242]
    2. 1fpm
      complexed with cs, so4
      1. chain a [59945]
      2. chain b [59946]
    3. 1fp7
      complexed with k, so4
      1. chain a [59943]
      2. chain b [59944]
4. Nitrogenase iron protein [52661]
  1. Azotobacter vinelandii [TaxId: 354] [52662] (19)
    1. 2afh
      automatically matched to d1fp6a_
      complexed with 1pe, ca, cfn, clf, hca, na, p6g, peg, pg4, pge, sf4, trs
      1. region e:1-289 [126683]
    2. 2afh
      automatically matched to d1fp6a_
      complexed with 1pe, ca, cfn, clf, hca, na, p6g, peg, pg4, pge, sf4, trs
      1. region f:1-286 [126684]
    3. 1fp6
      complexed with adp, fs4, mg
      1. chain a [32243]
      2. chain b [32244]
      3. chain c [32245]
      4. chain d [32246]
    4. 1m34
      complexed with adp, alf, ca, cfm, clf, fs4, hca, mg
      1. chain e [78519]
      2. chain f [78520]
      3. chain g [78521]
      4. chain h [78522]
      5. chain m [78527]
      6. chain n [78528]
      7. chain o [78529]
      8. chain p [78530]
    5. 1g20
      complexed with ca, cfm, clf, fs4, hca
      1. chain e [32247]
      2. chain f [32248]
      3. chain g [32249]
      4. chain h [32250]
    6. 1g5p
      complexed with fs4
      1. chain a [32253]
      2. chain b [32254]
    7. 2nip
      complexed with fs4
      1. chain a [32251]
      2. chain b [32252]
    8. 1de0
      1. chain a [32255]
      2. chain b [32256]
    9. 1g1m
      complexed with fs4
      1. chain a [32257]
      2. chain b [32258]
    10. 1n2c
      complexed with adp, alf, ca, cfm, clf, fs4, hca, mg
      1. chain e [32259]
      2. chain f [32260]
      3. chain g [32261]
      4. chain h [32262]
    11. 1rw4
      complexed with fs4, gol; mutant
      1. chain a [97962]
    12. 2c8v
      automatically matched to d1rw4a_
      complexed with atp, fs1, mg
      1. region a:1-272 [130128]
    13. 1xcp
      automatically matched to d1de0a_
      complexed with adp, mg, sf4; mutant
      1. region a:1-289 [121856]
    14. 1xcp
      automatically matched to d1de0a_
      complexed with adp, mg, sf4; mutant
      1. region b:1-289 [121857]
    15. 1xcp
      automatically matched to d1de0a_
      complexed with adp, mg, sf4; mutant
      1. region c:1-289 [121858]
    16. 1xcp
      automatically matched to d1de0a_
      complexed with adp, mg, sf4; mutant
      1. region d:1-289 [121859]
    17. 1g21
      complexed with atp, ca, cfm, clf, fs4, hca, mg
      1. chain e [32265]
      2. chain f [32266]
      3. chain g [32267]
      4. chain h [32268]
    18. 1m1y
      chemically crosslinked structure
      complexed with ca, cfm, clf, fs4, hca
      1. chain e [78445]
      2. chain f [78446]
      3. chain g [78447]
      4. chain h [78448]
      5. chain m [78453]
      6. chain n [78454]
      7. chain o [78455]
      8. chain p [78456]
    19. 1nip
      complexed with adp, fs4, mo4
      1. chain a [32263]
      2. chain b [32264]
  2. Clostridium pasteurianum [TaxId: 1501] [52663] (1)
    1. 1cp2
      complexed with fs4
      1. chain a [32269]
      2. chain b [32270]
5. Cell division regulator MinD [64019]
  1. Archaeon Archaeoglobus fulgidus [TaxId: 2234] [64020] (1)
    1. 1hyq
      1. chain a [61412]
  2. Archaeon Pyrococcus furiosus [TaxId: 2261] [64021] (2)
    1. 1g3q
      complexed with adp, mg
      1. chain a [60237]
    2. 1g3r
      complexed with acp, mg
      1. chain a [60238]
  3. Archaeon Pyrococcus horikoshii [TaxId: 53953] [64022] (1)
    1. 1ion
      complexed with adp, mg
      1. chain a [62633]
6. GTPase domain of the signal sequence recognition protein Ffh [52664]
  1. Thermus aquaticus [TaxId: 271] [52665] (25)
    1. 1ls1
      complexed with mo5, oxy
      1. region a:89-295 [78171]
    2. 2j45
      automatically matched to d2ffha3
      complexed with ca, edo, mes, mrd, na
      1. region a:89-297 [137984]
    3. 2j45
      automatically matched to d2ffha3
      complexed with ca, edo, mes, mrd, na
      1. region b:89-297 [137986]
    4. 2j46
      automatically matched to d2ffha3
      complexed with act, cl, mn, mrd
      1. region a:89-296 [137988]
    5. 2j46
      automatically matched to d2ffha3
      complexed with act, cl, mn, mrd
      1. region b:89-297 [137990]
    6. 2c04
      automatically matched to d2ffha3
      complexed with ca, gcp
      1. region a:89-297 [129571]
    7. 2c04
      automatically matched to d2ffha3
      complexed with ca, gcp
      1. region b:89-296 [129573]
    8. 2c03
      automatically matched to d2ffha3
      complexed with dio, edo, gdp
      1. region a:89-295 [129567]
    9. 2c03
      automatically matched to d2ffha3
      complexed with dio, edo, gdp
      1. region b:89-295 [129569]
    10. 1okk
      complexed with bzp, edo, gcp, mo3, so4
      1. region a:89-293 [93260]
    11. 1rj9
      complexed with gcp, mg
      1. region b:89-295 [97556]
    12. 1ffh
      complexed with mo5
      1. region a:89-295 [32271]
    13. 2j7p
      automatically matched to d2ffha3
      complexed with edo, gnp, iod, k, mg
      1. region a:89-294 [138120]
    14. 2j7p
      automatically matched to d2ffha3
      complexed with edo, gnp, iod, k, mg
      1. region b:89-294 [138122]
    15. 1jpn
      complexed with acy, gnp, oc3, oc4
      1. region a:89-296 [67040]
      2. region b:89-295 [67042]
    16. 1ng1
      complexed with acy, cd, edo, gdp, mo4, mo6
      1. region a:89-294 [32272]
    17. 1o87
      complexed with cl, fmt, gdp, mo4, mo5
      1. region a:89-295 [92641]
      2. region b:89-295 [92643]
    18. 2ng1
      complexed with dox, edo, gdp; mutant
      1. region a:89-294 [32273]
    19. 3ng1
      complexed with cd, edo, so4
      1. region a:89-294 [32274]
      2. region b:89-294 [32275]
    20. 2cnw
      automatically matched to d2ffha3
      complexed with 5gp, alf, gdp, mg
      1. region a:89-293 [130650]
    21. 2cnw
      automatically matched to d2ffha3
      complexed with 5gp, alf, gdp, mg
      1. region b:89-293 [130652]
    22. 2cnw
      automatically matched to d2ffha3
      complexed with 5gp, alf, gdp, mg
      1. region c:89-293 [130654]
    23. 1jpj
      complexed with gnp
      1. region a:89-294 [67025]
    24. 2ffh
      complexed with cd, so4; mutant
      1. region a:89-307 [32276]
      2. region b:89-307 [32277]
      3. region c:89-307 [32278]
    25. 2iy3
      automatically matched to d2ffha3
      1. region a:89-305 [137791]
  2. Archaeon Acidianus ambivalens [TaxId: 2283] [64023] (2)
    1. 1j8y
      mutant
      1. region f:87-297 [62748]
    2. 1j8m
      1. region f:87-297 [62743]
  3. Archaeon Sulfolobus solfataricus [TaxId: 2287] [102373] (2)
    1. 1qzx
      1. region a:88-294 [96713]
      2. region b:88-294 [96716]
    2. 1qzw
      complexed with ccc, gtp
      1. region a:88-294 [96701]
      2. region c:88-294 [96704]
      3. region e:88-294 [96707]
      4. region g:88-294 [96710]
7. GTPase domain of the signal recognition particle receptor FtsY [52666]
  1. Escherichia coli [TaxId: 562] [52667] (2)
    1. 2qy9
      automatically matched to d1ftsa2
      1. region a:285-495 [151470]
    2. 1fts
      1. region a:285-495 [32279]
  2. Thermus aquaticus [TaxId: 271] [102374] (8)
    1. 1okk
      complexed with bzp, edo, gcp, mo3, so4
      1. region d:97-303 [93262]
    2. 1rj9
      complexed with gcp, mg
      1. region a:96-303 [97554]
    3. 2j7p
      automatically matched to d1okkd2
      complexed with edo, gnp, iod, k, mg
      1. region d:97-303 [138124]
    4. 2j7p
      automatically matched to d1okkd2
      complexed with edo, gnp, iod, k, mg
      1. region e:97-303 [138126]
    5. 2iyl
      automatically matched to d1okkd2
      complexed with gdp, so4
      1. region d:97-303 [137802]
    6. 2cnw
      automatically matched to d1okkd2
      complexed with 5gp, alf, gdp, mg
      1. region d:97-303 [130656]
    7. 2cnw
      automatically matched to d1okkd2
      complexed with 5gp, alf, gdp, mg
      1. region e:97-303 [130658]
    8. 2cnw
      automatically matched to d1okkd2
      complexed with 5gp, alf, gdp, mg
      1. region f:97-303 [130660]
  3. Thermotoga maritima [TaxId: 2336] [110550] (1)
    SQ Q9WZ40
    1. 1vma
      Structural genomics target
      complexed with cit, mg
      1. region a:82-294 [108888]
      2. region b:82-294 [108890]
8. Arsenite-translocating ATPase ArsA [52668]
  Duplication: consists of two domains of this fold arranged as the NIP subunits in the dimer
  1. Escherichia coli [TaxId: 562] [52669] (4)
    1. 1ihu
      complexed with adp, af3, cd, cl, mg, tas
      1. region a:1-296 [62394]
      2. region a:308-586 [62395]
    2. 1f48
      complexed with adp, cd, cl, mg, sb, sbo
      1. region a:1-296 [32280]
      2. region a:309-586 [32281]
    3. 1ii0
      complexed with adp, atp, cd, cl, mg, tas
      1. region a:1-296 [62396]
      2. region a:309-589 [62397]
      3. region b:1001-1296 [62398]
      4. region b:1307-1589 [62399]
    4. 1ii9
      complexed with adp, anp, cd, cl, mg, tas
      1. region a:1-295 [62418]
      2. region a:309-589 [62419]
      3. region b:1001-1295 [62420]
      4. region b:1307-1589 [62421]
9. Hypothetical protein YjiA, N-terminal domain [89671]
  homologue of the cobalamin biosynthesis protein CobW
  1. Escherichia coli [TaxId: 562] [89672] (1)
    1. 1nij
      CASP5
      structural genomics
      1. region a:2-223 [85741]
10. Molybdopterin-guanine dinucleotide biosynthesis protein MobB [89673]
  forms segment-swapped dimer
  1. Escherichia coli [TaxId: 562] [89674] (2)
    1. 1np6
      complexed with so4
      1. chain a [85954]
      2. chain b [85955]
    2. 1p9n
      complexed with mse, so4
      1. chain a [87997]
      2. chain b [87998]
  2. Bacillus stearothermophilus [TaxId: 1422] [117539] (1)
    SQ Q5L1X2 # 91% sequence identity
    1. 1xjc
      1. chain a [115387]
11. CTP synthase PyrG, N-terminal domain [110551]
  1. Escherichia coli [TaxId: 562] [110552] (1)
    SQ P08398
    1. 1s1m
      complexed with iod, mg, mpd, so4
      1. region a:1-266 [105202]
      2. region b:1-266 [105204]
  2. Thermus thermophilus [TaxId: 274] [110553] (3)
    SQ Q5SIA8
    1. 1vco
      complexed with gln
      1. region a:11-282 [108509]
    2. 1vcm
      1. region a:11-282 [108505]
    3. 1vcn
      complexed with so4
      1. region a:11-282 [108507]
  3. Human (Homo sapiens) [TaxId: 9606] [159561] (2)
    SQ Q5VW67 1-273
    1. 2vo1
      complexed with so4
      1. region a:1-273 [153348]
    2. 2vo1
      automatically matched to 2VO1 A:1-273
      complexed with so4
      1. region b:1-273 [153349]
12. ATP(GTP)-binding protein PAB0955 [142297]
  PYRAB14380; belongs to Pfam 03029
  1. Pyrococcus abyssi [TaxId: 29292] [142298] (9)
    SQ Q9UYR9 30-273
    1. 1yrb
      automatically matched to 1YR6 A:1-244
      complexed with gdp, mg
      1. region a:1-244 [123915]
    2. 1yrb
      automatically matched to 1YR6 A:1-244
      complexed with gdp, mg
      1. region b:1-244 [123916]
    3. 1yra
      automatically matched to 1YR6 A:1-244
      complexed with gdp
      1. region a:1-244 [123913]
    4. 1yra
      automatically matched to 1YR6 A:1-244
      complexed with gdp
      1. region b:1-244 [123914]
    5. 1yr7
      automatically matched to 1YR6 A:1-244
      complexed with gsp
      1. region a:1-242 [123910]
    6. 1yr6
      1. region a:1-244 [123909]
    7. 2oxr
      automatically matched to 1YR6 A:1-244
      complexed with gdp, mg
      1. region a:1-243 [139423]
    8. 1yr8
      automatically matched to 1YR6 A:1-244
      complexed with gtp
      1. region a:1-244 [123911]
    9. 1yr9
      automatically matched to 1YR6 A:1-244
      complexed with gdp, po4
      1. region a:1-244 [123912]
13. Hypothetical protein TM0796 [142299]
  member of Pfam 07755; DUF1611; contains extra N-terminal alpha/beta fold of Rossmann-fold topology, parallel beta-sheet, strand order 312456
  1. Thermotoga maritima [TaxId: 2336] [142300] (2)
    SQ Q9WZQ3 1-338
    1. 2g0t
      complexed with edo, fmt, po4
      1. region a:1-338 [134499]
    2. 2g0t
      automatically matched to 2G0T A:1-338
      complexed with edo, fmt, po4
      1. region b:1-338 [134500]
14. LAO/AO transport system kinase ArgK [159562]
  member of Pfam 03308; contains extra N-terminal 3-helical bundle and extra C-terminal helical dimerisation domain
  1. Escherichia coli [TaxId: 562] [159563] (1)
    SQ P27254 1-327
    1. 2p67
      complexed with cl, na
      1. region a:1-327 [149269]
15. Metallochaperone MeaB [159564]
  ArgK-like (sub)family; Pfam 03308
  1. Methylobacterium extorquens [TaxId: 408] [159565] (4)
    SQ Q8RPA0 5-327
    1. 2qm8
      automatically matched to 2QM7 A:5-327
      complexed with po4; mutant
      1. region a:5-327 [150874]
    2. 2qm8
      automatically matched to 2QM7 A:5-327
      complexed with po4; mutant
      1. region b:6-327 [150875]
    3. 2qm7
      complexed with gdp, po4; mutant
      1. region a:5-327 [150872]
    4. 2qm7
      automatically matched to 2QM7 A:5-327
      complexed with gdp, po4; mutant
      1. region b:6-327 [150873]
RecA protein-like (ATPase-domain) [52670] (29)
core: mixed beta-sheet of 8 strands, order 32451678; strand 7 is antiparallel to the rest
1. RecA protein, ATPase-domain [52671]
  C-terminal domain is alpha+beta
  1. Escherichia coli [TaxId: 562] [52672] (7)
    SQ P0A7G6 P03017
    1. 1u94
      complexed with ca
      1. region a:6-268 [107743]
    2. 1xmv
      complexed with adp, mg
      1. region a:3-268 [115564]
    3. 1u98
      complexed with gol, so4
      1. region a:6-268 [107745]
    4. 1xms
      complexed with anp, mn
      1. region a:3-268 [115559]
    5. 2reb
      1. region a:3-268 [32282]
    6. 1u99
      complexed with po4
      1. region a:6-268 [107747]
    7. 1rea
      complexed with adp
      1. region a:3-268 [32283]
  2. Mycobacterium tuberculosis [TaxId: 1773] [52673] (6)
    1. 1mo6
      complexed with dtp
      1. region a:1-269 [79339]
    2. 1mo3
      complexed with adp
      1. region a:1-269 [79333]
    3. 1g19
      complexed with po4
      1. region a:1-269 [32284]
    4. 1mo5
      complexed with sap
      1. region a:1-269 [79337]
    5. 1mo4
      complexed with sap
      1. region a:1-269 [79335]
    6. 1g18
      complexed with adp, alf
      1. region a:3-269 [32285]
  3. Mycobacterium smegmatis [TaxId: 1772] [89675] (4)
    1. 1ube
      complexed with adp
      1. region a:5-270 [88412]
    2. 1ubf
      complexed with sap
      1. region a:4-270 [88414]
    3. 1ubg
      complexed with dtp
      1. region a:1-270 [88416]
    4. 1ubc
      1. region a:5-270 [88410]
  4. Deinococcus radiodurans [TaxId: 1299] [117540] (1)
    SQ P42443 15-341
    1. 1xp8
      complexed with sap
      1. region a:15-282 [115735]
2. Gene 4 protein (g4p, DNA primase), helicase domain [52674]
  1. Bacteriophage T7 [TaxId: 10760] [52675] (7)
    1. 1cr2
      1. chain a [32288]
    2. 1cr1
      1. chain a [32286]
    3. 1cr0
      1. chain a [32287]
    4. 1cr4
      1. chain a [32289]
    5. 1e0j
      complexed with anp, mg
      1. chain a [32290]
      2. chain b [32291]
      3. chain c [32292]
      4. chain d [32293]
      5. chain e [32294]
      6. chain f [32295]
    6. 1e0k
      1. chain a [32296]
      2. chain b [32297]
      3. chain c [32298]
      4. chain d [32299]
      5. chain e [32300]
      6. chain f [32301]
    7. 1q57
      mutant
      1. region a:264-549 [95867]
      2. region b:264-549 [95869]
      3. region c:264-549 [95871]
      4. region d:264-549 [95873]
      5. region e:264-549 [95875]
      6. region f:264-549 [95877]
      7. region g:264-549 [95879]
3. Hexameric replicative helicase repA [52676]
  1. Escherichia coli [TaxId: 562] [52677] (3)
    1. 1nlf
      complexed with so4
      1. chain a [85850]
      2. chain b [85851]
      3. chain c [85852]
    2. 1olo
      complexed with so4
      1. chain a [93318]
      2. chain b [93319]
    3. 1g8y
      1. chain a [32302]
      2. chain b [32303]
      3. chain c [32304]
      4. chain d [32305]
      5. chain e [32306]
      6. chain f [32307]
      7. chain g [32308]
      8. chain h [32309]
      9. chain i [32310]
      10. chain j [32311]
      11. chain k [32312]
      12. chain l [32313]
4. Bacterial conjugative coupling protein TrwB [69492]
  1. Escherichia coli [TaxId: 562] [69493] (5)
    1. 1e9r
      complexed with so4; mutant
      1. chain a [64827]
      2. chain b [64828]
      3. chain d [64829]
      4. chain e [64830]
      5. chain f [64831]
      6. chain g [64832]
    2. 1e9s
      mutant
      1. chain a [64833]
      2. chain b [64834]
      3. chain d [64835]
      4. chain e [64836]
      5. chain f [64837]
      6. chain g [64838]
      7. chain h [64839]
      8. chain i [64840]
      9. chain j [64841]
      10. chain k [64842]
      11. chain l [64843]
      12. chain m [64844]
    3. 1gl6
      complexed with cl, epe, gnp; mutant
      1. chain a [70259]
      2. chain b [70260]
      3. chain d [70261]
      4. chain e [70262]
      5. chain f [70263]
      6. chain g [70264]
    4. 1gki
      complexed with adp, epe, mg; mutant
      1. chain a [70221]
      2. chain b [70222]
      3. chain d [70223]
      4. chain e [70224]
      5. chain f [70225]
      6. chain g [70226]
    5. 1gl7
      complexed with anp, cl; mutant
      1. chain a [70265]
      2. chain b [70266]
      3. chain d [70267]
      4. chain e [70268]
      5. chain f [70269]
      6. chain g [70270]
5. Hexameric traffic ATPase, HP0525 [52719]
  type II/IV secretion system protein; includes N-terminal alpha+beta domain of a profilin-like topology
  1. Helicobacter pylori [TaxId: 210] [52720] (6)
    1. 1g6o
      structural genomics
      complexed with adp, peg
      1. chain a [32430]
      2. chain b [32431]
    2. 2pt7
      automatically matched to d1g6oa_
      1. region a:6-328 [149834]
    3. 2pt7
      automatically matched to d1g6oa_
      1. region d:6-328 [149835]
    4. 1nly
      complexed with 2pe, atg, mg, mse, so4
      1. chain a [85858]
      2. chain b [85859]
    5. 1opx
      complexed with 2pe, mse, so4
      1. chain a [87243]
      2. chain b [87244]
    6. 1nlz
      complexed with mse
      1. chain a [85860]
      2. chain b [85861]
      3. chain c [85862]
      4. chain d [85863]
      5. chain e [85864]
      6. chain f [85865]
6. Extracellular secretion NTPase EpsE [102375]
  type II/IV secretion system protein; overall structure is similar to HP0525
  1. Vibrio cholerae [TaxId: 666] [102376] (2)
    1. 1p9r
      complexed with cl, zn
      1. chain a [94399]
    2. 1p9w
      complexed with anp, zn
      1. chain a [94400]
7. DNA repair protein Rad51, catalytic domain [82412]
  1. Human (Homo sapiens) [TaxId: 9606] [82413] (1)
    1. 1n0w
      complex with BRCA2 BRC4 repeat peptide
      complexed with cl, edo, mg, mse
      1. chain a [79772]
  2. Archaeon Pyrococcus furiosus [TaxId: 2261] [102377] (1)
    1. 1pzn
      complexed with gol, imd, mpd, so4
      1. region a:96-349 [95457]
      2. region b:96-349 [95458]
      3. region c:96-349 [95459]
      4. region d:96-349 [95460]
      5. region e:96-349 [95461]
      6. region f:96-349 [95462]
      7. region g:96-349 [95463]
  3. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [110554] (1)
    SQ P25454 81-395
    1. 1szp
      complexed with so4
      1. region a:145-395 [106177]
      2. region b:145-395 [106179]
      3. region c:145-395 [106181]
      4. region d:145-395 [106183]
      5. region e:145-395 [106185]
      6. region f:145-395 [106187]
  4. Archaeon Methanococcus voltae [TaxId: 2188] [110555] (8)
    SQ O73948
    1. 2i1q
      automatically matched to d1t4ga2
      complexed with anp, ca, mg, na; mutant
      1. region a:65-322 [136985]
    2. 1t4g
      complexed with anp, mg; mutant
      1. region a:65-322 [106419]
    3. 2f1j
      automatically matched to d1t4ga2
      complexed with adp, mg; mutant
      1. region a:65-322 [132771]
    4. 2b21
      automatically matched to d1t4ga2
      complexed with anp, k, mg; mutant
      1. region a:65-322 [127688]
    5. 1xu4
      complexed with anp, k, mg; mutant
      1. region a:65-322 [116046]
    6. 2gdj
      automatically matched to d1t4ga2
      complexed with anp, mg
      1. region a:65-322 [135018]
    7. 2f1i
      automatically matched to d1t4ga2
      complexed with anp, mg; mutant
      1. region a:65-322 [132769]
    8. 2f1h
      automatically matched to d1t4ga2
      complexed with anp, k, mg; mutant
      1. region a:65-322 [132767]
8. Central domain of alpha subunit of F1 ATP synthase [88774]
  1. Cow (Bos taurus) [TaxId: 9913] [88775] (18)
    SQ P19483
    1. 2jdi
      automatically matched to d1bmfa3
      complexed with anp, mg
      1. region a:95-379 [145685]
    2. 2jdi
      automatically matched to d1bmfa3
      complexed with anp, mg
      1. region b:95-379 [145688]
    3. 2jdi
      automatically matched to d1bmfa3
      complexed with anp, mg
      1. region c:95-379 [145691]
    4. 2ck3
      automatically matched to d1bmfa3
      complexed with adp, anp, azi, mg, po4
      1. region a:95-379 [145035]
    5. 2ck3
      automatically matched to d1bmfa3
      complexed with adp, anp, azi, mg, po4
      1. region b:95-379 [145038]
    6. 2ck3
      automatically matched to d1bmfa3
      complexed with adp, anp, azi, mg, po4
      1. region c:95-379 [145041]
    7. 1w0j
      complexed with adp, bef, gol, mo3, mo4, po4
      1. region a:95-379 [108991]
      2. region b:95-379 [108994]
      3. region c:95-379 [108997]
    8. 1e79
      complexed with adp, atp, cry, glh, mg, so4
      1. region a:95-379 [32314]
      2. region b:95-379 [32315]
      3. region c:95-379 [32316]
    9. 1w0k
      complexed with adp, gol, mg, po4
      1. region a:95-379 [109010]
      2. region b:95-379 [109013]
      3. region c:95-379 [109016]
    10. 1h8e
      complexed with adp, alf, gol, mg, so4
      1. region a:95-379 [60740]
      2. region b:95-379 [60743]
      3. region c:95-379 [60746]
    11. 1nbm
      complexed with adp, atp, mg, po4, tyn
      1. region a:95-379 [32332]
      2. region b:95-379 [32333]
      3. region c:95-379 [32334]
    12. 1e1r
      complexed with adp, af3, anp, mg, po4
      1. region a:95-379 [32320]
      2. region b:95-379 [32321]
      3. region c:95-379 [32322]
    13. 1bmf
      complexed with adp, anp, mg
      1. region a:95-379 [32326]
      2. region b:95-379 [32327]
      3. region c:95-379 [32328]
    14. 1e1q
      complexed with adp, anp, mg, po4
      1. region a:95-379 [32338]
      2. region b:95-379 [32339]
      3. region c:95-379 [32340]
    15. 1efr
      complexed with adp, anp, app, bal, cpi, mg, tlx
      1. region a:95-379 [32344]
      2. region b:95-379 [32345]
      3. region c:95-379 [32346]
    16. 1ohh
      complexed with anp, mg
      1. region a:95-379 [87017]
      2. region b:95-379 [87020]
      3. region c:95-379 [87023]
    17. 1h8h
      complexed with adp, atp, gol, mg, po4
      1. region a:95-379 [60761]
      2. region b:95-379 [60764]
      3. region c:95-379 [60767]
    18. 1cow
      complexed with adp, anp, aur, mg
      1. region a:95-379 [32350]
      2. region b:95-379 [32351]
      3. region c:95-379 [32352]
  2. Rat (Rattus norvegicus) [TaxId: 10116] [88776] (2)
    1. 1mab
      complexed with adp, atp, mg, po4
      1. region a:95-379 [32356]
    2. 2f43
      automatically matched to d1maba3
      complexed with adp, atp, mg, vo4
      1. region a:95-379 [145133]
  3. Bacillus sp., strain ps3 [TaxId: 1409] [88777] (1)
    1. 1sky
      complexed with so4
      1. region b:96-371 [32358]
  4. Spinach (Spinacia oleracea), chloroplast [TaxId: 3562] [88778] (2)
    1. 1fx0
      1. region a:97-372 [60082]
    2. 1kmh
      complexed with ttx
      1. region a:97-372 [72747]
9. Central domain of beta subunit of F1 ATP synthase [88779]
  1. Cow (Bos taurus) [TaxId: 9913] [88780] (12)
    SQ P00829
    1. 1w0j
      complexed with adp, bef, gol, mo3, mo4, po4
      1. region d:82-357 [109000]
      2. region e:82-357 [109003]
      3. region f:82-357 [109006]
    2. 1e79
      complexed with adp, atp, cry, glh, mg, so4
      1. region d:82-357 [32317]
      2. region e:82-357 [32318]
      3. region f:82-357 [32319]
    3. 1w0k
      complexed with adp, gol, mg, po4
      1. region d:82-357 [109019]
      2. region e:82-357 [109022]
      3. region f:82-357 [109025]
    4. 1h8e
      complexed with adp, alf, gol, mg, so4
      1. region d:82-357 [60749]
      2. region e:82-357 [60752]
      3. region f:82-357 [60755]
    5. 1nbm
      complexed with adp, atp, mg, po4, tyn
      1. region d:82-357 [32335]
      2. region e:82-357 [32336]
      3. region f:82-357 [32337]
    6. 1e1r
      complexed with adp, af3, anp, mg, po4
      1. region d:82-357 [32323]
      2. region e:82-357 [32324]
      3. region f:82-357 [32325]
    7. 1bmf
      complexed with adp, anp, mg
      1. region d:82-357 [32329]
      2. region e:82-357 [32330]
      3. region f:82-357 [32331]
    8. 1e1q
      complexed with adp, anp, mg, po4
      1. region d:82-357 [32341]
      2. region e:82-357 [32342]
      3. region f:82-357 [32343]
    9. 1efr
      complexed with adp, anp, app, bal, cpi, mg, tlx
      1. region d:82-357 [32347]
      2. region e:82-357 [32348]
      3. region f:82-357 [32349]
    10. 1ohh
      complexed with anp, mg
      1. region d:82-357 [87026]
      2. region e:82-357 [87029]
      3. region f:82-357 [87032]
    11. 1h8h
      complexed with adp, atp, gol, mg, po4
      1. region d:82-357 [60770]
      2. region e:82-357 [60773]
      3. region f:82-357 [60776]
    12. 1cow
      complexed with adp, anp, aur, mg
      1. region d:82-357 [32353]
      2. region e:82-357 [32354]
      3. region f:82-357 [32355]
  2. Rat (Rattus norvegicus) [TaxId: 10116] [88781] (8)
    1. 2jdi
      automatically matched to d1mabb3
      complexed with anp, mg
      1. region d:82-357 [138265]
    2. 2jdi
      automatically matched to d1mabb3
      complexed with anp, mg
      1. region e:82-357 [138268]
    3. 2jdi
      automatically matched to d1mabb3
      complexed with anp, mg
      1. region f:82-357 [138271]
    4. 2ck3
      automatically matched to d1mabb3
      complexed with adp, anp, azi, mg, po4
      1. region d:82-357 [130555]
    5. 2ck3
      automatically matched to d1mabb3
      complexed with adp, anp, azi, mg, po4
      1. region e:82-357 [130558]
    6. 2ck3
      automatically matched to d1mabb3
      complexed with adp, anp, azi, mg, po4
      1. region f:82-357 [130561]
    7. 1mab
      complexed with adp, atp, mg, po4
      1. region b:82-357 [32357]
    8. 2f43
      automatically matched to d1mabb3
      complexed with adp, atp, mg, vo4
      1. region b:82-357 [132910]
  3. Bacillus sp., strain ps3 [TaxId: 1409] [88782] (1)
    1. 1sky
      complexed with so4
      1. region e:83-356 [32359]
  4. Spinach (Spinacia oleracea), chloroplast [TaxId: 3562] [88783] (2)
    1. 1fx0
      1. region b:98-377 [60085]
    2. 1kmh
      complexed with ttx
      1. region b:98-377 [72750]
10. Transcription termination factor Rho, ATPase domain [89676]
  1. Escherichia coli [TaxId: 562] [89677] (10)
    SQ P03002
    1. 1xpu
      complexed with ags, fpd, mg
      1. region a:129-417 [115792]
      2. region b:129-417 [115795]
      3. region c:129-417 [115798]
      4. region d:129-417 [115801]
      5. region e:129-417 [115804]
      6. region f:129-417 [115807]
    2. 1xpr
      complexed with ags, fb, mg
      1. region a:129-417 [115774]
      2. region b:129-417 [115777]
      3. region c:129-417 [115780]
      4. region d:129-417 [115783]
      5. region e:129-417 [115786]
      6. region f:129-417 [115789]
    3. 1pvo
      complexed with anp
      1. region a:129-417 [88318]
      2. region b:129-417 [88320]
      3. region c:129-417 [88323]
      4. region d:129-417 [88326]
      5. region e:129-417 [88329]
      6. region f:129-417 [88332]
    4. 1pv4
      complexed with mse
      1. region a:129-417 [88297]
      2. region b:129-417 [88299]
      3. region c:129-417 [88302]
      4. region d:129-417 [88305]
      5. region e:129-417 [88308]
      6. region f:129-417 [88311]
    5. 1xpo
      automatically matched to d1pv4a3
      complexed with ags, bcm, mg
      1. region a:130-417 [122214]
    6. 1xpo
      automatically matched to d1pv4a3
      complexed with ags, bcm, mg
      1. region b:130-417 [122217]
    7. 1xpo
      automatically matched to d1pv4a3
      complexed with ags, bcm, mg
      1. region c:130-417 [122220]
    8. 1xpo
      automatically matched to d1pv4a3
      complexed with ags, bcm, mg
      1. region d:130-417 [122223]
    9. 1xpo
      automatically matched to d1pv4a3
      complexed with ags, bcm, mg
      1. region e:130-417 [122226]
    10. 1xpo
      automatically matched to d1pv4a3
      complexed with ags, bcm, mg
      1. region f:130-417 [122229]
11. Adenosylcobinamide kinase/adenosylcobinamide phosphate guanylyltransferase CobU [52682]
  lacks the last strand 8
  1. Salmonella typhimurium [TaxId: 90371] [52683] (2)
    1. 1c9k
      complexed with 5gp, mg, po4, pop
      1. chain a [32363]
      2. chain b [32364]
      3. chain c [32365]
    2. 1cbu
      complexed with so4
      1. chain a [32360]
      2. chain b [32361]
      3. chain c [32362]
12. ATP:corrinoid adenosyltransferase CobA [52684]
  lacks the two last strands
  1. Salmonella typhimurium [TaxId: 90371] [52685] (3)
    1. 1g5t
      complexed with atp, mg
      1. chain a [32366]
    2. 1g5r
      complexed with cl
      1. chain a [32367]
    3. 1g64
      complexed with atp, b12, mg
      1. chain a [32368]
      2. chain b [32369]
13. Meiotic recombination protein DMC1/LIM15 homolog [110556]
  1. Human (Homo sapiens) [TaxId: 9606] [110557] (1)
    SQ Q14565
    1. 1v5w
      1. chain a [108387]
      2. chain b [108388]
14. Circadian clock protein KaiC [110558]
  duplication: contains two copies of this domain
  1. Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140] [110559] (25)
    SQ Q79PF4 14-497
    1. 1tf7
      complexed with atp
      1. region a:14-255 [106838]
      2. region a:256-497 [106839]
      3. region b:14-255 [106840]
      4. region b:256-497 [106841]
      5. region c:14-255 [106842]
      6. region c:256-497 [106843]
      7. region d:14-255 [106844]
      8. region d:256-497 [106845]
      9. region e:14-255 [106846]
      10. region e:256-497 [106847]
      11. region f:14-255 [106848]
      12. region f:256-497 [106849]
    2. 1u9i
      automatically matched to d1tf7a1
      complexed with atp, mg; mutant
      1. region a:14-255 [119637]
    3. 1u9i
      automatically matched to d1tf7a2
      complexed with atp, mg; mutant
      1. region a:256-497 [119638]
    4. 1u9i
      automatically matched to d1tf7a1
      complexed with atp, mg; mutant
      1. region b:14-255 [119639]
    5. 1u9i
      automatically matched to d1tf7a2
      complexed with atp, mg; mutant
      1. region b:256-497 [119640]
    6. 1u9i
      automatically matched to d1tf7a1
      complexed with atp, mg; mutant
      1. region c:14-255 [119641]
    7. 1u9i
      automatically matched to d1tf7a2
      complexed with atp, mg; mutant
      1. region c:256-497 [119642]
    8. 1u9i
      automatically matched to d1tf7a1
      complexed with atp, mg; mutant
      1. region d:14-255 [119643]
    9. 1u9i
      automatically matched to d1tf7a2
      complexed with atp, mg; mutant
      1. region d:256-497 [119644]
    10. 1u9i
      automatically matched to d1tf7a1
      complexed with atp, mg; mutant
      1. region e:14-255 [119645]
    11. 1u9i
      automatically matched to d1tf7a2
      complexed with atp, mg; mutant
      1. region e:256-497 [119646]
    12. 1u9i
      automatically matched to d1tf7a1
      complexed with atp, mg; mutant
      1. region f:14-255 [119647]
    13. 1u9i
      automatically matched to d1tf7a2
      complexed with atp, mg; mutant
      1. region f:256-497 [119648]
    14. 2gbl
      automatically matched to d1tf7a1
      complexed with atp, mg
      1. region a:14-255 [134911]
    15. 2gbl
      automatically matched to d1tf7a2
      complexed with atp, mg
      1. region a:256-497 [134912]
    16. 2gbl
      automatically matched to d1tf7a1
      complexed with atp, mg
      1. region b:14-255 [134913]
    17. 2gbl
      automatically matched to d1tf7a2
      complexed with atp, mg
      1. region b:256-497 [134914]
    18. 2gbl
      automatically matched to d1tf7a1
      complexed with atp, mg
      1. region c:14-255 [134915]
    19. 2gbl
      automatically matched to d1tf7a2
      complexed with atp, mg
      1. region c:256-497 [134916]
    20. 2gbl
      automatically matched to d1tf7a1
      complexed with atp, mg
      1. region d:14-255 [134917]
    21. 2gbl
      automatically matched to d1tf7a2
      complexed with atp, mg
      1. region d:256-497 [134918]
    22. 2gbl
      automatically matched to d1tf7a1
      complexed with atp, mg
      1. region e:14-255 [134919]
    23. 2gbl
      automatically matched to d1tf7a2
      complexed with atp, mg
      1. region e:256-497 [134920]
    24. 2gbl
      automatically matched to d1tf7a1
      complexed with atp, mg
      1. region f:14-255 [134921]
    25. 2gbl
      automatically matched to d1tf7a2
      complexed with atp, mg
      1. region f:256-497 [134922]
15. NTPase P4 [117541]
  contains extra N-terminal subdomain (~100 residues): [contains pseudo beta-barrel]
  1. Bacteriophage phi-12 [TaxId: 161736] [117542] (8)
    SQ Q94M05
    1. 1w44
      complexed with adp
      1. chain a [114147]
      2. chain b [114148]
      3. chain c [114149]
    2. 1w48
      complexed with apc
      1. chain a [114156]
      2. chain b [114157]
      3. chain c [114158]
    3. 1w49
      complexed with apc, mg
      1. chain a [114159]
      2. chain b [114160]
      3. chain c [114161]
    4. 1w4b
      complexed with adp, mg
      1. chain a [114165]
      2. chain b [114166]
      3. chain c [114167]
    5. 1w4a
      complexed with apc, mn
      1. chain a [114162]
      2. chain b [114163]
      3. chain c [114164]
    6. 1w47
      complexed with adp, mn
      1. chain a [114153]
      2. chain b [114154]
      3. chain c [114155]
    7. 1w4c
      1. chain a [114168]
      2. chain b [114169]
      3. chain c [114170]
      4. chain d [114171]
      5. chain e [114172]
      6. chain f [114173]
      7. chain g [114174]
      8. chain h [114175]
      9. chain i [114176]
      10. chain j [114177]
      11. chain k [114178]
      12. chain l [114179]
      13. chain m [114180]
      14. chain n [114181]
      15. chain o [114182]
      16. chain p [114183]
      17. chain q [114184]
      18. chain r [114185]
      19. chain s [114186]
      20. chain t [114187]
      21. chain u [114188]
      22. chain v [114189]
      23. chain w [114190]
      24. chain x [114191]
    8. 1w46
      complexed with adp, mg
      1. chain a [114150]
      2. chain b [114151]
      3. chain c [114152]
16. Hypothetical kinase-like protein Aq_1292 [142301]
  member of Pfam 03266 (DUF265)
  1. Aquifex aeolicus [TaxId: 63363] [142302] (1)
    SQ O67322 1-178
    1. 1ye8
      complexed with mg, na, po4; mutant
      1. region a:1-178 [123010]
17. Cancer-related NTPase, C1orf57 [159566]
  member of Pfam 03266; DUF265
  1. Human (Homo sapiens) [TaxId: 9606] [159567] (1)
    SQ Q5TDE9 2-190
    1. 2i3b
      1. region a:1-189 [147497]
Bacterial cell division inhibitor SulA [89678] (1)
homologous to RecA but lacks its P-loop motif; the fold is C-terminally truncated; 5-stranded parallel beta-sheet, order: 15423
1. Hypothetical protein PA3008 [89679]
  1. Pseudomonas aeruginosa [TaxId: 287] [89680] (2)
    1. 1ofu
      complexed with FtsZ
      complexed with gdp
      1. chain x [86976]
      2. chain y [86977]
    2. 1oft
      1. chain a [86968]
      2. chain b [86969]
      3. chain c [86970]
      4. chain d [86971]
ABC transporter ATPase domain-like [52686] (29)
there are two additional subdomains inserted into the central core that has a RecA-like topology
1. ATP-binding subunit of the histidine permease [52687]
  1. Salmonella typhimurium [TaxId: 90371] [52688] (1)
    1. 1b0u
      1. chain a [32370]
2. Branched chain aminoacid ABC transporter [75207]
  1. Thermotoga maritima, TM1139 [TaxId: 2336] [75208] (1)
    1. 1ji0
      complexed with atp, mse
      1. chain a [71665]
3. MJ1267 [64025]
  1. Archaeon Methanococcus jannaschii [TaxId: 2190] [64026] (3)
    1. 1g6h
      complexed with adp, hgc, mg
      1. chain a [60318]
    2. 1gaj
      complexed with cl, peg, so4, tbu
      1. chain a [60416]
    3. 1g9x
      complexed with adp, hgc, mg; mutant
      1. chain a [76219]
      2. chain b [76220]
      3. chain c [76221]
4. MJ0796 [64027]
  1. Archaeon Methanococcus jannaschii [TaxId: 2190] [64028] (2)
    1. 1l2t
      complexed with atp, ioh, na; mutant
      1. chain a [73514]
      2. chain b [73515]
    2. 1f3o
      complexed with adp, mg
      1. chain a [59631]
5. Cystic fibrosis transmembrane conductance regulator, CFTR, nucleotide-binding domain [102378]
  1. Mouse (Mus musculus) [TaxId: 10090] [102379] (8)
    SQ P26361 390-670
    1. 1r0w
      complexed with acy
      1. chain a [96754]
      2. chain b [96755]
      3. chain c [96756]
      4. chain d [96757]
    2. 1r0x
      complexed with acy, atp, mg
      1. chain a [96758]
      2. chain b [96759]
      3. chain c [96760]
      4. chain d [96761]
    3. 1r0z
      complexed with acy, atp, mg
      1. chain a [96766]
      2. chain b [96767]
      3. chain c [96768]
      4. chain d [96769]
    4. 1q3h
      complexed with acy, anp, mg
      1. chain a [95688]
      2. chain b [95689]
      3. chain c [95690]
      4. chain d [95691]
    5. 1xf9
      complexed with acy, atp, mg; mutant
      1. chain a [115245]
      2. chain b [115246]
      3. chain c [115247]
      4. chain d [115248]
    6. 1r0y
      complexed with acy, adp
      1. chain a [96762]
      2. chain b [96763]
      3. chain c [96764]
      4. chain d [96765]
    7. 1xfa
      complexed with acy, atp, cl, mg; mutant
      1. chain a [115249]
      2. chain b [115250]
    8. 1r10
      complexed with acy, atp, mg
      1. chain a [96770]
      2. chain b [96771]
  2. Human (Homo sapiens) [TaxId: 9606] [117543] (2)
    SQ P13569 389-671
    1. 1xmi
      complexed with atp, mg; mutant
      1. chain a [115489]
      2. chain b [115490]
      3. chain c [115491]
      4. chain d [115492]
      5. chain e [115493]
    2. 1xmj
      complexed with atp, mg; mutant
      1. chain a [115494]
6. Peptide transporter Tap1, C-terminal ABC domain [64029]
  1. Human (Homo sapiens) [TaxId: 9606] [64030] (1)
    1. 1jj7
      complexed with adp, mg
      1. chain a [63114]
7. Maltose transport protein MalK, N-terminal domain [52689]
  1. Archaeon Thermococcus litoralis [TaxId: 2265] [52690] (1)
    1. 1g29
      CASP4
      complexed with cl, dox, mg, na, nh4, pop
      1. region 1:1-240 [32371]
      2. region 2:1-240 [32372]
  2. Escherichia coli [TaxId: 562] [102380] (13)
    1. 2awn
      automatically matched to d1q12a2
      complexed with adp, mg
      1. region a:4-235 [127460]
    2. 2awn
      automatically matched to d1q12a2
      complexed with adp, mg
      1. region b:4-235 [127462]
    3. 2awn
      automatically matched to d1q12a2
      complexed with adp, mg
      1. region c:4-235 [127464]
    4. 2awn
      automatically matched to d1q12a2
      complexed with adp, mg
      1. region d:4-235 [127466]
    5. 1q12
      complexed with atp
      1. region a:4-235 [95530]
      2. region b:4-235 [95532]
      3. region c:4-235 [95534]
      4. region d:4-235 [95536]
    6. 2r6g
      automatically matched to d1q12a2
      complexed with atp, mal; mutant
      1. region a:4-235 [151605]
    7. 2r6g
      automatically matched to d1q12a2
      complexed with atp, mal; mutant
      1. region b:4-235 [151607]
    8. 2awo
      automatically matched to d1q12a2
      complexed with adp, mg
      1. region a:4-235 [127468]
    9. 2awo
      automatically matched to d1q12a2
      complexed with adp, mg
      1. region b:4-235 [127470]
    10. 2awo
      automatically matched to d1q12a2
      complexed with adp, mg
      1. region c:4-235 [127472]
    11. 2awo
      automatically matched to d1q12a2
      complexed with adp, mg
      1. region d:4-235 [127474]
    12. 1q1e
      1. region a:4-235 [95571]
      2. region b:4-235 [95573]
    13. 1q1b
      1. region a:4-235 [95563]
      2. region b:4-235 [95565]
      3. region c:4-235 [95567]
      4. region d:4-235 [95569]
8. Glucose transport protein GlcV, N-terminal domain [89681]
  1. Archaeon Sulfolobus solfataricus [TaxId: 2287] [89682] (5)
    1. 1oxx
      complexed with iod; mutant
      1. region k:1-242 [93716]
    2. 1oxs
      complexed with iod
      1. region c:1-242 [87520]
    3. 1oxv
      complexed with anp, iod, mg
      1. region a:1-242 [87534]
      2. region b:1-242 [87536]
      3. region d:1-242 [87538]
    4. 1oxu
      complexed with adp, iod, mg
      1. region a:1-242 [87528]
      2. region b:1-242 [87530]
      3. region c:1-242 [87532]
    5. 1oxt
      1. region a:1-242 [87522]
      2. region b:1-242 [87524]
      3. region d:1-242 [87526]
9. ABC transporter involved in vitamin B12 uptake, BtuD [75209]
  1. Escherichia coli [TaxId: 562] [75210] (1)
    1. 1l7v
      complexed with mse, v4o
      1. chain c [73674]
      2. chain d [73675]
10. Haemolysin B ATP-binding protein [89683]
  1. Escherichia coli [TaxId: 562] [89684] (3)
    1. 2pmk
      automatically matched to d1mt0a_
      complexed with 128, adp
      1. region a:467-707 [149669]
    2. 2ff7
      automatically matched to d1mt0a_
      complexed with adp
      1. region a:467-707 [133377]
    3. 1mt0
      complexed with so4
      1. chain a [85096]
11. Multidrug resistance ABC transporter MsbA, C-terminal domain [89685]
  a low-resolution structure of the E. coli MsbA in an open conformation is also available (f.35.1.1)
  1. Vibrio cholerae [TaxId: 666] [89686] (1)
    1. 1pf4
      structure in a closed conformation
      1. region a:321-564 [88052]
      2. region b:321-564 [88054]
      3. region c:321-564 [88056]
      4. region d:321-564 [88058]
  2. Salmonella typhimurium [TaxId: 90371] [159568] (12)
    SQ P63359 329-581
    1. 3b60
      complexed with anp
      1. region a:329-581 [154868]
    2. 3b60
      automatically matched to 3B60 A:329-581
      complexed with anp
      1. region b:329-581 [154870]
    3. 3b60
      automatically matched to 3B60 A:329-581
      complexed with anp
      1. region c:329-581 [154872]
    4. 3b60
      automatically matched to 3B60 A:329-581
      complexed with anp
      1. region d:329-581 [154874]
    5. 3b5y
      automatically matched to 3B60 A:329-581
      complexed with anp
      1. region a:329-581 [154852]
    6. 3b5y
      automatically matched to 3B60 A:329-581
      complexed with anp
      1. region b:329-581 [154854]
    7. 3b5y
      automatically matched to 3B60 A:329-581
      complexed with anp
      1. region c:329-581 [154856]
    8. 3b5y
      automatically matched to 3B60 A:329-581
      complexed with anp
      1. region d:329-581 [154858]
    9. 3b5z
      automatically matched to 3B60 A:329-581
      complexed with adp, i42
      1. region a:329-581 [154860]
    10. 3b5z
      automatically matched to 3B60 A:329-581
      complexed with adp, i42
      1. region b:329-581 [154862]
    11. 3b5z
      automatically matched to 3B60 A:329-581
      complexed with adp, i42
      1. region c:329-581 [154864]
    12. 3b5z
      automatically matched to 3B60 A:329-581
      complexed with adp, i42
      1. region d:329-581 [154866]
12. Multidrug resistance ABC transporter LmrA, C-terminal domain [102381]
  1. Lactococcus lactis [TaxId: 1358] [102382] (1)
    1. 1mv5
      complexed with adp, atp, mg
      1. chain a [91469]
      2. chain b [91470]
      3. chain c [91471]
      4. chain d [91472]
13. Rad50 [52691]
  1. Archaeon Pyrococcus furiosus [TaxId: 2261] [52692] (4)
    1. 1f2t
      N- and C-terminal subdomains only; the middle coiled coil domain is deleted
      1. chain a,b [32373]
    2. 1f2u
      N- and C-terminal subdomains only; the middle coiled coil domain is deleted
      complexed with atp, mg
      1. chain a,b [32374]
      2. chain c,d [32375]
    3. 1us8
      N- and C-terminal subdomains only; the middle coiled coil domain is deleted
      mutant
      1. chain a,b [99859]
    4. 1ii8
      N- and C-terminal subdomains; include a small fragment of the middle coiled coil domain
      complexed with po4
      1. chain a,b [62417]
14. Smc head domain [52693]
  1. Thermotoga maritima [TaxId: 2336] [52694] (1)
    1. 1e69
      N- and C-terminal subdomains only; the middle coiled coil domain is deleted
      1. chain a [32376]
      2. chain b [32377]
      3. chain c [32378]
      4. chain d [32379]
      5. chain e [32380]
      6. chain f [32381]
  2. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [117544] (1)
    SQ P32908 2-214,1024-1223
    1. 1w1w
      complexed with atg, mg
      1. chain a [114080]
      2. chain b [114081]
      3. chain c [114082]
      4. chain d [114083]
  3. Pyrococcus furiosus [TaxId: 2261] [117545] (2)
    SQ Q877I1 1-167,1012-1173
    1. 1xew
      1. chain x,y [115235]
    2. 1xex
      complexed with atp, mg; mutant
      1. chain a,b [115236]
15. Cell division protein MukB [52695]
  1. Escherichia coli [TaxId: 562] [52696] (1)
    1. 1qhl
      N-terminal (sub)domain only; in the absence of the C-terminal domain complementing the central core structure, the P-loop region folds in a helix-loop-helix structure
      1. chain a [32382]
16. DNA repair protein MutS, the C-terminal domain [52697]
  1. Thermus aquaticus [TaxId: 271] [52698] (4)
    1. 1ewq
      CASP4
      complexed with edo, so4
      1. region a:542-765 [32383]
      2. region b:1542-1762 [32384]
    2. 1fw6
      protein/DNA complex; complexed with adp, mg, so4
      1. region a:542-765 [32385]
      2. region b:1542-1762 [32386]
    3. 1nne
      complexed with adp, bef, edo, so4
      1. region a:542-765 [85896]
      2. region b:1542-1765 [85900]
    4. 1ewr
      1. region a:542-765 [32387]
      2. region b:1542-1762 [32388]
  2. Escherichia coli [TaxId: 562] [52699] (10)
    SQ P23909 2-800
    1. 1wb9
      automatically matched to d1e3ma2
      complexed with adp, mg; mutant
      1. region a:567-800 [120834]
    2. 1w7a
      complexed with atp, mo3
      1. region a:567-800 [109219]
      2. region b:567-800 [109223]
    3. 1e3m
      complexed with adp, mo4
      1. region a:567-800 [32389]
      2. region b:567-800 [32390]
    4. 1oh6
      complexed with adp, mo4
      1. region a:567-800 [92988]
      2. region b:567-800 [92992]
    5. 1wbd
      automatically matched to d1e3ma2
      complexed with adp, mg; mutant
      1. region a:567-800 [120842]
    6. 1wbb
      automatically matched to d1e3ma2
      complexed with adp, mg; mutant
      1. region a:567-800 [120838]
    7. 1ng9
      complexed with adp, mo6; mutant
      1. region a:567-800 [80481]
      2. region b:567-800 [80485]
    8. 1oh7
      complexed with adp, mo4
      1. region a:567-800 [92996]
      2. region b:567-800 [93000]
    9. 1oh5
      complexed with adp, mo4
      1. region a:567-800 [92980]
      2. region b:567-800 [92984]
    10. 1oh8
      complexed with adp, mo4
      1. region a:567-800 [93004]
      2. region b:567-800 [93008]
17. Putative ABC transporter PF0895 [110560]
  1. Pyrococcus furiosus [TaxId: 2261] [110561] (1)
    SQ Q8U2E3
    1. 1sgw
      Structural genomics target
      complexed with cl, na
      1. chain a [105541]
18. Hypothetical protein PH0022, N-terminal domain [117546]
  1. Pyrococcus horikoshii [TaxId: 53953] [117547] (2)
    SQ O57758
    1. 1v43
      1. region a:7-245 [113523]
    2. 1vci
      complexed with atp
      1. region a:7-245 [113609]
19. Putative ABC transporter TM0544 [117548]
  1. Thermotoga maritima [TaxId: 2336] [117549] (1)
    SQ Q9WZ14
    1. 1vpl
      Structural genomics target
      complexed with so4
      1. chain a [113966]
20. Putative multidrug export ATP-binding/permease protein SAV1866 [142303]
  1. Staphylococcus aureus [TaxId: 1280] [142304] (4)
    SQ Q99T13 324-578
    1. 2hyd
      complexed with adp, na
      1. region a:324-578 [136875]
    2. 2hyd
      automatically matched to 2HYD A:324-578
      complexed with adp, na
      1. region b:324-578 [136877]
    3. 2onj
      automatically matched to 2HYD A:324-578
      complexed with anp, na
      1. region a:324-578 [139154]
    4. 2onj
      automatically matched to 2HYD A:324-578
      complexed with anp, na
      1. region b:324-578 [139156]
21. Molybdate/tungstate import ATP-binding protein WtpC (ModC) [159569]
  1. Archaeoglobus fulgidus [TaxId: 2234] [159570] (4)
    SQ O30144 1-240
    1. 2onk
      complexed with mg, po4, wo4
      1. region a:1-240 [148903]
    2. 2onk
      automatically matched to 2ONK A:1-240
      complexed with mg, po4, wo4
      1. region b:1-240 [148904]
    3. 2onk
      automatically matched to 2ONK A:1-240
      complexed with mg, po4, wo4
      1. region f:1-240 [148908]
    4. 2onk
      automatically matched to 2ONK A:1-240
      complexed with mg, po4, wo4
      1. region g:1-240 [148909]
22. Methionine import ATP-binding protein MetN [159571]
  1. Escherichia coli [TaxId: 562] [159572] (4)
    SQ P30750 1-240
    1. 3dhw
      1. region c:1-240 [157729]
    2. 3dhw
      automatically matched to 3DHW C:1-240
      1. region d:1-240 [157731]
    3. 3dhw
      automatically matched to 3DHW C:1-240
      1. region g:1-240 [157735]
    4. 3dhw
      automatically matched to 3DHW C:1-240
      1. region h:1-240 [157737]
23. Sulfate/molybdate ABC transporter, ATP-binding protein [159573]
  1. Methanosarcina acetivorans [TaxId: 2214] [159574] (2)
    SQ Q8TTZ3 1-229
    1. 3d31
      complexed with wo4
      1. region a:1-229 [157262]
    2. 3d31
      automatically matched to 3D31 A:1-229
      complexed with wo4
      1. region b:1-229 [157264]
Tandem AAA-ATPase domain [81268] (27)
duplication: tandem repeat of two RecA-like (AAA) domains
1. DEXX box DNA helicase [52701]
  each AAA domain contains an all-alpha insert subdomain
  1. Bacillus stearothermophilus, PcrA [TaxId: 1422] [52702] (5)
    1. 1qhh
      complexed with atp
      1. chain a,b,c,d [32393]
    2. 1pjr
      1. region a:1-318 [32391]
      2. region a:319-651 [32392]
    3. 1qhg
      complexed with atp, mg; mutant
      1. region a:1-318 [59032]
      2. region a:319-651 [59033]
    4. 2pjr
      complexed with so4
      1. region a:7-318 [32395]
      2. region a:319-548,b: [32396]
      3. region f:704-1018 [32397]
      4. region f:1019-1247,g: [32398]
    5. 3pjr
      complexed with atp
      1. region a:4-318 [32399]
      2. region a:319-652 [32400]
  2. Escherichia coli, RepD [TaxId: 562] [52703] (1)
    1. 1uaa
      protein/DNA complex
      1. region a:2-307 [32401]
      2. region a:308-640 [32402]
      3. region b:2-307 [32403]
      4. region b:308-642 [32404]
2. Putative DEAD box RNA helicase [52704]
  homologous to eIF4a and UvrB
  1. Archaeon Methanococcus jannaschii [TaxId: 2190] [52705] (1)
    1. 1hv8
      complexed with so4
      1. region a:3-210 [32405]
      2. region a:211-365 [32406]
      3. region b:3-210 [32407]
      4. region b:211-365 [32408]
3. Probable DEAD box RNA helicase YqfR [102383]
  1. Bacillus stearothermophilus [TaxId: 1422] [102384] (1)
    1. 1q0u
      N-terminal domain only
      1. chain a [95512]
      2. chain b [95513]
4. RecQ helicase domain [102385]
  1. Escherichia coli [TaxId: 562] [102386] (2)
    1. 1oyw
      complexed with mn, zn
      1. region a:1-206 [93761]
      2. region a:207-406 [93762]
    2. 1oyy
      complexed with ags, mn, zn
      1. region a:1-206 [93773]
      2. region a:207-406 [93774]
5. DEAD box RNA helicase rck/p54 [102387]
  1. Human (Homo sapiens) [TaxId: 9606] [102388] (1)
    1. 1vec
      N-terminal domain only
      complexed with tar, zn2
      1. chain a [100575]
      2. chain b [100576]
6. RecG helicase domain [69494]
  1. Thermotoga maritima [TaxId: 2336] [69495] (1)
    1. 1gm5
      complexed with adp, mg
      1. region a:286-549 [65300]
      2. region a:550-755 [65301]
7. Initiation factor 4a [52706]
  homologous to UvrB
  1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [52707] (5)
    1. 1fuk
      C-terminal domain
      complexed with zn
      1. chain a [32409]
    2. 1qde
      N-terminal AAA domain; P-loop is empty and in a non-canonical conformation
      complexed with so4
      1. chain a [32410]
    3. 1qva
      N-terminal AAA domain; P-loop is empty and in a non-canonical conformation
      1. chain a [32411]
    4. 1fuu
      1. chain a [32412]
    5. 1fuu
      1. region b:11-225 [32413]
      2. region b:226-394 [32414]
  2. Human (Homo sapiens) [TaxId: 9606] [142305] (2)
    SQ P60842 21-238
    4A-I
    1. 2g9n
      complexed with mly
      1. region a:21-238 [134814]
    2. 2g9n
      automatically matched to 2G9N A:21-238
      complexed with mly
      1. region b:23-237 [134815]
8. Nucleotide excision repair enzyme UvrB [52708]
  contains large insertions in the first AAA domain
  1. Thermus thermophilus [TaxId: 274] [52709] (2)
    1. 1c4o
      complexed with bog, so4
      1. region a:2-409 [32415]
      2. region a:410-583 [32416]
    2. 1d2m
      complexed with bog, so4
      1. region a:2-409 [32417]
      2. region a:410-583 [32418]
  2. Bacillus caldotenax [TaxId: 1395] [52710] (7)
    SQ P56981
    1. 1t5l
      complexed with zn; mutant
      1. region a:2-414 [106455]
      2. region a:415-595 [106456]
      3. region b:2-414 [106457]
      4. region b:415-595 [106458]
    2. 2fdc
      automatically matched to d1d9xa1
      complexed with flq
      1. region a:2-414 [133302]
    3. 2fdc
      automatically matched to d1d9xa2
      complexed with flq
      1. region a:415-594 [133303]
    4. 2fdc
      automatically matched to d1d9xa1
      complexed with flq
      1. region b:2-414 [133304]
    5. 2fdc
      automatically matched to d1d9xa2
      complexed with flq
      1. region b:415-593 [133305]
    6. 1d9x
      complexed with zn
      1. region a:2-414 [32419]
      2. region a:415-595 [32420]
    7. 1d9z
      complexed with atp, mg, zn
      1. region a:2-414 [32421]
      2. region a:415-595 [32422]
9. Translocation ATPase SecA, nucleotide-binding domains [82414]
  a pre-protein crosslinking domain inserted in the first AAA domain
  1. Bacillus subtilis [TaxId: 1423] [82415] (4)
    SQ P28366
    1. 1tf5
      1. region a:1-226,a:349-395 [106836]
      2. region a:396-570 [106837]
    2. 1m6n
      complexed with so4
      1. region a:1-226,a:349-395 [78699]
      2. region a:396-570 [78700]
    3. 1tf2
      complexed with adp, mg
      1. region a:1-226,a:349-395 [106832]
      2. region a:396-570 [106833]
    4. 1m74
      complexed with adp, mg, so4
      1. region a:1-226,a:349-395 [78722]
      2. region a:396-570 [78723]
  2. Mycobacterium tuberculosis [TaxId: 1773] [89687] (2)
    1. 1nkt
      complexed with adp, mg
      1. region a:-15-225,a:350-396 [85832]
      2. region a:397-615 [85833]
      3. region b:-15-225,b:350-396 [85836]
      4. region b:397-615 [85837]
    2. 1nl3
      1. region a:-15-225,a:350-396 [85841]
      2. region a:397-615 [85842]
      3. region b:-15-225,b:350-396 [85845]
      4. region b:397-615 [85846]
10. Spliceosome RNA helicase BAT1 (UAP56) [110562]
  1. Human (Homo sapiens) [TaxId: 9606] [110563] (5)
    SQ Q13838 45-428
    1. 1t6n
      complexed with flc
      1. chain a [106576]
      2. chain b [106577]
    2. 1t5i
      1. chain a [106450]
    3. 1xti
      complexed with ipa
      1. region a:46-254 [116022]
      2. region a:255-423 [116023]
    4. 1xtj
      complexed with acy, adp, mg
      1. region a:46-254 [116024]
      2. region a:255-423 [116025]
    5. 1xtk
      complexed with bme; mutant
      1. region a:46-254 [116026]
      2. region a:255-423 [116027]
11. Exodeoxyribonuclease V beta chain (RecB), N-terminal domain [117550]
  each AAA domain contains an all-alpha insert subdomain
  1. Escherichia coli [TaxId: 562] [117551] (1)
    SQ P08394
    1. 1w36
      complexed with ca
      1. region b:1-485 [114122]
      2. region b:486-880 [114123]
      3. region e:1-485 [114130]
      4. region e:486-880 [114131]
12. Exodeoxyribonuclease V gamma chain (RecC), N-terminal domain [117552]
  each AAA domain contains an all-alpha insert subdomain
  1. Escherichia coli [TaxId: 562] [117553] (1)
    SQ P07648
    1. 1w36
      complexed with ca
      1. region c:1-347 [114125]
      2. region c:348-817 [114126]
      3. region f:1-347 [114133]
      4. region f:348-817 [114134]
13. Exodeoxyribonuclease V alpha chain (RecD) [117554]
  contains extra N-terminal alpha+beta (sub)domain (~100 residues)
  1. Escherichia coli [TaxId: 562] [117555] (1)
    SQ P04993
    1. 1w36
      complexed with ca
      1. region d:2-360 [114128]
      2. region d:361-606 [114129]
      3. region g:2-360 [114136]
      4. region g:361-606 [114137]
14. putative ATP-dependent RNA helicase VlgB [142306]
  1. Flatworm (Dugesia japonica) [TaxId: 6161] [142307] (2)
    SQ O97032 164-401
    1. 1wrb
      C-terminal domain
      complexed with so4
      1. region a:164-401 [121192]
    2. 1wrb
      automatically matched to 1WRB A:164-401
      complexed with so4
      1. region b:167-401 [121193]
15. putative ATP-dependent RNA helicase PF2015 [142308]
  separate structures of other domains are known: the middle nuclease domain (scop_sp 89718) and the C-terminal RuvA-like HhH domain (PDB 1x2i)
  1. Pyrococcus furiosus [TaxId: 2261] [142309] (2)
    SQ Q8TZH8 2-201! SQ Q8TZH8 202-487
    1. 1wp9
      complexed with po4
      1. region a:1-200 [121143]
    2. 1wp9
      complexed with po4
      1. region a:201-486 [121144]
16. ATP-dependent RNA helicase DDX25 [142310]
  1. Human (Homo sapiens) [TaxId: 9606] [142311] (4)
    SQ Q9UHL0 307-474
    1. 2g2j
      C-terminal domain
      complexed with so4
      1. region a:307-474 [134536]
    2. 2g2j
      automatically matched to 2G2J A:307-474
      complexed with so4
      1. region b:307-474 [134537]
    3. 2g2j
      automatically matched to 2G2J A:307-474
      complexed with so4
      1. region c:307-474 [134538]
    4. 2g2j
      automatically matched to 2G2J A:307-474
      complexed with so4
      1. region d:307-474 [134539]
17. Helicase of the SNF2/Rad54 hamily [142312]
  1. Sulfolobus solfataricus [TaxId: 2287] [142313] (8)
    SQ Q97XQ7 432-661! SQ Q97XQ7 662-802! SQ Q97XQ7 663-802
    1. 1z5z
      PDB chain is longer than UniProt sequence
      1. region a:663-906 [124499]
    2. 1z5z
      automatically matched to 1Z5Z A:663-906
      1. region b:663-903 [124500]
    3. 1z63
      1. region a:432-661 [124502]
    4. 1z63
      PDB chain is longer than UniProt sequence
      1. region a:662-903 [124503]
    5. 1z63
      automatically matched to 1Z63 A:432-661
      1. region b:432-661 [124504]
    6. 1z63
      automatically matched to 1Z63 A:662-903
      1. region b:662-903 [124505]
    7. 1z6a
      automatically matched to 1Z63 A:432-661
      complexed with hg, po4
      1. region a:432-661 [124508]
    8. 1z6a
      automatically matched to 1Z63 A:662-903
      complexed with hg, po4
      1. region a:662-903 [124509]
18. Probable ATP-dependent RNA helicase DDX48 [142314]
  Eukaryotic translation initiation factor 4A isoform 3
  1. Human (Homo sapiens) [TaxId: 9606] [142315] (10)
    SQ P38919 22-243! SQ P38919 244-411
    1. 2j0s
      automatically matched to 2HYI C:22-243
      complexed with anp, mg
      1. region a:22-243 [137913]
    2. 2j0s
      automatically matched to 2HYI C:244-411
      complexed with anp, mg
      1. region a:244-411 [137914]
    3. 2hyi
      complexed with anp, mg; mutant
      1. region c:22-243 [136892]
    4. 2hyi
      complexed with anp, mg; mutant
      1. region c:244-411 [136893]
    5. 2hyi
      automatically matched to 2HYI C:22-243
      complexed with anp, mg; mutant
      1. region i:22-243 [136896]
    6. 2hyi
      automatically matched to 2HYI C:244-411
      complexed with anp, mg; mutant
      1. region i:244-411 [136897]
    7. 2j0q
      automatically matched to 2HYI C:22-243
      complexed with anp, mg
      1. region a:22-243 [137904]
    8. 2j0q
      automatically matched to 2HYI C:244-411
      complexed with anp, mg
      1. region a:244-411 [137905]
    9. 2j0q
      automatically matched to 2HYI C:22-243
      complexed with anp, mg
      1. region b:22-243 [137906]
    10. 2j0q
      automatically matched to 2HYI C:244-411
      complexed with anp, mg
      1. region b:244-411 [137907]
19. Rad54-like, Rad54L [142316]
  1. Zebra fish (Danio rerio) [TaxId: 7955] [142317] (2)
    SQ Q7ZV09 390-735! SQ Q7ZV09 92-389
    1. 1z3i
      complexed with so4, zn
      1. region x:390-735 [124406]
    2. 1z3i
      complexed with so4, zn
      1. region x:92-389 [124407]
20. DNA repair protein RAD25 [142318]
  shares with the DNA helicase UvsW (scop_fa 102396) extra N-terminal alpha+beta subdomain that might be related to the DNA repair protein MutS domain I (scop_sf 55271)
  1. Archaeoglobus fulgidus [TaxId: 2234] [142319] (10)
    SQ O29889 237-436! SQ O29889 238-434! SQ O29889 3-236! SQ O29889 4-209
    1. 2fz4
      N-terminal domain only
      1. region a:24-229 [134419]
    2. 2fwr
      complexed with ipa, po4
      1. region a:257-456 [134253]
    3. 2fwr
      complexed with ipa, po4
      1. region a:23-256 [134254]
    4. 2fwr
      automatically matched to 2FWR A:257-456
      complexed with ipa, po4
      1. region b:257-454 [134255]
    5. 2fwr
      automatically matched to 2FWR A:23-256
      complexed with ipa, po4
      1. region b:23-256 [134256]
    6. 2fwr
      automatically matched to 2FWR A:257-456
      complexed with ipa, po4
      1. region c:257-454 [134257]
    7. 2fwr
      automatically matched to 2FWR A:23-256
      complexed with ipa, po4
      1. region c:23-256 [134258]
    8. 2fwr
      automatically matched to 2FWR A:257-456
      complexed with ipa, po4
      1. region d:257-456 [134259]
    9. 2fwr
      automatically matched to 2FWR A:23-256
      complexed with ipa, po4
      1. region d:23-256 [134260]
    10. 2fzl
      C-terminal domain only
      complexed with ipa
      1. region a:258-454 [134457]
21. Transcription-repair coupling factor, TRCF [142320]
  similar to UvrB in the N-terminal part and DEAD helicases in the C-terminal part; also contains CarD-like domain in the middle and TRCF domain at the C-terminus
  1. Escherichia coli [TaxId: 562] [142321] (10)
    SQ P30958 2-348! SQ P30958 26-333! SQ P30958 349-465! SQ P30958 546-778! SQ P30958 779-989
    1. 2b2n
      N-terminal domain only
      complexed with na, p4c, so4
      1. region a:26-333 [127710]
    2. 2b2n
      automatically matched to 2B2N A:26-333
      complexed with na, p4c, so4
      1. region b:26-333 [127711]
    3. 2eyq
      complexed with epe, so4
      1. region a:349-465 [132591]
    4. 2eyq
      complexed with epe, so4
      1. region a:546-778 [132592]
    5. 2eyq
      complexed with epe, so4
      1. region a:2-348 [132593]
    6. 2eyq
      complexed with epe, so4
      1. region a:779-989 [132594]
    7. 2eyq
      automatically matched to 2EYQ A:349-465
      complexed with epe, so4
      1. region b:349-465 [132597]
    8. 2eyq
      automatically matched to 2EYQ A:546-778
      complexed with epe, so4
      1. region b:546-778 [132598]
    9. 2eyq
      automatically matched to 2EYQ A:2-348
      complexed with epe, so4
      1. region b:5-348 [132599]
    10. 2eyq
      automatically matched to 2EYQ A:779-989
      complexed with epe, so4
      1. region b:779-989 [132600]
22. Putative ATP-dependent RNA helicase DHH1 [142322]
  1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [142323] (2)
    SQ P39517 252-422! SQ P39517 46-251
    1. 1s2m
      1. region a:46-251 [118844]
    2. 1s2m
      1. region a:252-422 [118845]
23. Hel308 helicase [159575]
  1. Archaeoglobus fulgidus [TaxId: 2234] [159576] (4)
    1. 2p6r
      1. region a:1-202 [149272]
    2. 2p6r
      1. region a:203-403 [149273]
    3. 2p6u
      automatically matched to 2P6R A:1-202
      complexed with po4
      1. region a:1-202 [149276]
    4. 2p6u
      automatically matched to 2P6R A:203-403
      complexed with po4
      1. region a:203-403 [149277]
Extended AAA-ATPase domain [81269] (34)
fold is similar to that of RecA, but lacks the last two strands, followed by a family-specific Arg-finger domain
1. gamma subunit of DNA polymerase III, N-domain [64031]
  1. Escherichia coli [TaxId: 562] [64032] (3)
    SQ P06710 5-368
    1. 1jr3
      complexed with so4, zn
      1. region a:3-242 [63246]
      2. region b:4-242 [63248]
      3. region c:3-242 [63250]
    2. 1xxh
      complexed with atg, po4, zn
      1. region b:5-242 [116166]
      2. region c:5-242 [116168]
      3. region d:5-242 [116170]
      4. region g:5-242 [116176]
      5. region h:5-242 [116178]
      6. region i:5-242 [116180]
    3. 1xxi
      complexed with adp, po4, zn
      1. region b:5-242 [116186]
      2. region c:5-242 [116188]
      3. region d:5-242 [116190]
      4. region g:5-242 [116196]
      5. region h:5-242 [116198]
      6. region i:5-242 [116200]
  2. Thermotoga maritima [TaxId: 2336] [142324] (1)
    SQ Q9WZM9 11-208
    1. 2gno
      complexed with etx, na, unl
      1. region a:11-208 [135415]
2. delta prime subunit of DNA polymerase III, N-domain [52711]
  contains additional alpha-helical domain after the family specific domains
  1. Escherichia coli [TaxId: 562] [52712] (6)
    SQ P28631
    1. 1njf
      AAA+ domain only; nucleotide-bound form
      complexed with adp, atg, zn
      1. chain a [85781]
      2. chain b [85782]
      3. chain c [85783]
      4. chain d [85784]
    2. 1a5t
      complexed with zn
      1. region a:1-207 [32423]
    3. 1njg
      AAA+ domain only; nucleotide-free form
      complexed with so4, zn
      1. chain a [85785]
      2. chain b [85786]
    4. 1jr3
      complexed with so4, zn
      1. region e:1-207 [63254]
    5. 1xxh
      complexed with atg, po4, zn
      1. region e:1-207 [116172]
      2. region j:1-207 [116182]
    6. 1xxi
      complexed with adp, po4, zn
      1. region e:1-207 [116192]
      2. region j:1-207 [116202]
3. delta subunit of DNA polymerase III, N-domain [64033]
  1. Escherichia coli [TaxId: 562] [64034] (5)
    SQ P28630
    1. 1jql
      N-terminal subdomain only
      mutant
      1. chain b [63234]
    2. 1jr3
      complexed with so4, zn
      1. region d:1-211 [63252]
    3. 1jqj
      mutant
      1. region c:1-211 [67098]
      2. region d:1-209 [67100]
    4. 1xxh
      complexed with atg, po4, zn
      1. region a:1-211 [116164]
      2. region f:1-211 [116174]
    5. 1xxi
      complexed with adp, po4, zn
      1. region a:1-211 [116184]
      2. region f:1-211 [116194]
4. Replication factor C [64035]
  contains additional alpha-helical domain after the family specific domains
  1. Archaeon Pyrococcus furiosus [TaxId: 2261] [64036] (1)
    1. 1iqp
      complexed with adp
      1. region a:2-232 [62650]
      2. region b:2-232 [62652]
      3. region c:9-232 [62654]
      4. region d:2-232 [62656]
      5. region e:2-232 [62658]
      6. region f:2-232 [62660]
5. Chromosomal replication initiation factor DnaA [82416]
  contains TrpR-like DNA-binding domain after the family specific domains
  1. Aquifex aeolicus [TaxId: 63363] [82417] (5)
    1. 1l8q
      complexed with adp, mg, mse
      1. region a:77-289 [77810]
    2. 2hcb
      automatically matched to d1l8qa2
      complexed with abg, mg
      1. region a:77-289 [136326]
    3. 2hcb
      automatically matched to d1l8qa2
      complexed with abg, mg
      1. region b:77-289 [136328]
    4. 2hcb
      automatically matched to d1l8qa2
      complexed with abg, mg
      1. region c:77-289 [136330]
    5. 2hcb
      automatically matched to d1l8qa2
      complexed with abg, mg
      1. region d:77-289 [136332]
6. Holliday junction helicase RuvB [52713]
  contains "winged helix" DNA-binding domain after the family specific domains
  1. Thermus thermophilus [TaxId: 274] [52714] (3)
    1. 1ixs
      complexed with anp
      1. region b:4-242 [76934]
    2. 1hqc
      complexed with ade, mg
      1. region a:5-242 [32424]
      2. region b:5-242 [32425]
    3. 1ixr
      complexed with anp; mutant
      1. region c:5-242 [76931]
  2. Thermotoga maritima [TaxId: 2336] [64037] (6)
    1. 1in4
      complexed with act, adp, co, hez
      1. region a:17-254 [62598]
    2. 1j7k
      complexed with act, atp, co, hez; mutant
      1. region a:19-254 [62696]
    3. 1in6
      complexed with act, adp, co; mutant
      1. region a:17-254 [62602]
    4. 1in7
      complexed with act, adp; mutant
      1. region a:17-254 [62604]
    5. 1in8
      complexed with adp; mutant
      1. region a:17-254 [62606]
    6. 1in5
      complexed with adp; mutant
      1. region a:17-254 [62600]
7. Transcriptional activator sigm54 (NtrC1), C-terminal domain [102389]
  1. Aquifex aeolicus [TaxId: 63363] [102390] (2)
    1. 1ny5
      inactive state
      complexed with adp, gol, mg, po4
      1. region a:138-384 [92318]
      2. region b:138-385 [92320]
    2. 1ny6
      AAA+ domain only in the active state
      complexed with adp
      1. chain a [92321]
      2. chain b [92322]
      3. chain c [92323]
      4. chain d [92324]
      5. chain e [92325]
      6. chain f [92326]
      7. chain g [92327]
      8. chain h [92328]
      9. chain i [92329]
      10. chain j [92330]
      11. chain k [92331]
      12. chain l [92332]
      13. chain m [92333]
      14. chain n [92334]
8. CDC6, N-domain [52715]
  contains "winged helix" DNA-binding domain after the family specific domains
  1. Archaeon Pyrobaculum aerophilum [TaxId: 13773] [52716] (1)
    1. 1fnn
      complexed with adp, mg
      1. region a:1-276 [32426]
      2. region b:1-276 [32427]
9. Hexamerization domain of N-ethylmalemide-sensitive fusion (NSF) protein [52717]
  1. Chinese hamster (Cricetulus griseus) [TaxId: 10029] [52718] (2)
    1. 1d2n
      complexed with anp, gol, mg
      1. chain a [32428]
    2. 1nsf
      complexed with atp, mg
      1. chain a [32429]
10. Membrane fusion ATPase VCP/p97 [64038]
  1. Mouse (Mus musculus) [TaxId: 10090] [64039] (4)
    1. 1e32
      D1 domain from the N-D1 fragment
      complexed with adp
      1. region a:201-458 [59184]
    2. 1r7r
      complexed with adp
      1. region a:201-470 [97204]
      2. region a:471-735 [97205]
    3. 1oz4
      complete low resolution structure
      complexed with adp, af3, zn
      1. region a:201-470 [93794]
      2. region a:471-763 [93795]
      3. region b:201-470 [93798]
      4. region b:471-763 [93799]
      5. region c:201-470 [93802]
      6. region c:471-763 [93803]
    4. 1s3s
      D1 domain from the N-D1 fragment
      complexed with adp
      1. region a:201-458 [98440]
      2. region b:201-458 [98443]
      3. region c:201-458 [98446]
      4. region d:201-458 [98449]
      5. region e:201-458 [98452]
      6. region f:201-458 [98455]
11. AAA domain of cell division protein FtsH [82418]
  ATP-dependent protease
  1. Escherichia coli [TaxId: 562] [82419] (1)
    1. 1lv7
      complexed with so4
      1. chain a [78232]
  2. Thermus thermophilus [TaxId: 274] [82420] (4)
    1. 1ixz
      complexed with hg, so4
      1. chain a [76938]
    2. 1iy1
      complexed with adp
      1. chain a [76940]
    3. 1iy0
      complexed with anp
      1. chain a [76939]
    4. 1iy2
      complexed with so4
      1. chain a [76941]
  3. Thermotoga maritima [TaxId: 2336] [142325] (12)
    SQ Q9WZ49 150-402
    1. 2ce7
      complexed with adp, mg, zn; mutant
      1. region a:150-402 [130313]
    2. 2ce7
      automatically matched to 2CE7 A:150-402
      complexed with adp, mg, zn; mutant
      1. region b:150-402 [130315]
    3. 2ce7
      automatically matched to 2CE7 A:150-402
      complexed with adp, mg, zn; mutant
      1. region c:150-402 [130317]
    4. 2ce7
      automatically matched to 2CE7 A:150-402
      complexed with adp, mg, zn; mutant
      1. region d:150-402 [130319]
    5. 2ce7
      automatically matched to 2CE7 A:150-402
      complexed with adp, mg, zn; mutant
      1. region e:152-402 [130321]
    6. 2ce7
      automatically matched to 2CE7 A:150-402
      complexed with adp, mg, zn; mutant
      1. region f:150-402 [130323]
    7. 2cea
      automatically matched to 2CE7 A:150-402
      complexed with adp, mg, zn; mutant
      1. region a:150-402 [130333]
    8. 2cea
      automatically matched to 2CE7 A:150-402
      complexed with adp, mg, zn; mutant
      1. region b:150-402 [130335]
    9. 2cea
      automatically matched to 2CE7 A:150-402
      complexed with adp, mg, zn; mutant
      1. region c:150-402 [130337]
    10. 2cea
      automatically matched to 2CE7 A:150-402
      complexed with adp, mg, zn; mutant
      1. region d:150-402 [130339]
    11. 2cea
      automatically matched to 2CE7 A:150-402
      complexed with adp, mg, zn; mutant
      1. region e:152-402 [130341]
    12. 2cea
      automatically matched to 2CE7 A:150-402
      complexed with adp, mg, zn; mutant
      1. region f:150-402 [130343]
12. HslU [52721]
  ATPase subunit of ATP-dependent protease
  1. Escherichia coli [TaxId: 562] [52722] (10)
    1. 1e94
      complexed with anp
      1. chain e [32442]
      2. chain f [32443]
    2. 1ht1
      complexed with adp
      1. chain e [65928]
      2. chain f [65929]
      3. chain g [65930]
      4. chain i [65931]
    3. 1ht2
      complexed with adp
      1. chain e [65940]
      2. chain f [65941]
      3. chain g [65942]
      4. chain h [65943]
    4. 1hqy
      complexed with adp
      1. chain e [65913]
      2. chain f [65914]
    5. 1do0
      1. chain a [32432]
      2. chain b [32433]
      3. chain c [32434]
      4. chain d [32435]
      5. chain e [32436]
      6. chain f [32437]
    6. 1g4a
      complexed with dat
      1. chain e [32444]
      2. chain f [32445]
    7. 1do2
      1. chain a [32438]
      2. chain b [32439]
      3. chain c [32440]
      4. chain d [32441]
    8. 1yyf
      automatically matched to d1e94e_
      complexed with adp
      1. region a:2-443 [124215]
    9. 1yyf
      automatically matched to d1e94e_
      complexed with adp
      1. region b:2-443 [124216]
    10. 1g4b
      1. chain e [32446]
      2. chain f [32447]
      3. chain k [32448]
      4. chain l [32449]
  2. Haemophilus influenzae [TaxId: 727] [52723] (6)
    1. 1g41
      complexed with adp, so4
      1. chain a [32450]
    2. 1ofh
      complexed with adp, mg, mo3, mo4, po4
      1. chain a [86948]
      2. chain b [86949]
      3. chain c [86950]
    3. 1im2
      complexed with adp, so4
      1. chain a [62564]
    4. 1kyi
      complexed with atp, lvs
      1. chain a [73223]
      2. chain b [73224]
      3. chain c [73225]
      4. chain d [73226]
      5. chain e [73227]
      6. chain f [73228]
      7. chain s [73241]
      8. chain t [73242]
      9. chain u [73243]
      10. chain v [73244]
      11. chain w [73245]
      12. chain x [73246]
    5. 1ofi
      complexed with adp, lvs, mg, mo3, mo4, po4
      1. chain a [86957]
      2. chain b [86958]
      3. chain c [86959]
    6. 1g3i
      complexed with atp
      1. chain a [32451]
      2. chain b [32452]
      3. chain c [32453]
      4. chain d [32454]
      5. chain e [32455]
      6. chain f [32456]
      7. chain s [32457]
      8. chain t [32458]
      9. chain u [32459]
      10. chain v [32460]
      11. chain w [32461]
      12. chain x [32462]
13. ClpX [102391]
  ATPase subunit of ATP-dependent protease
  1. Helicobacter pylori [TaxId: 210] [102392] (1)
    1. 1um8
      complexed with adp
      1. chain a [99580]
14. ATPase domain of protease Lon (La) [102393]
  1. Escherichia coli [TaxId: 562] [102394] (1)
    1. 1qzm
      C-terminal all-alpha subdomain only
      1. chain a [96651]
15. ClpA, an Hsp100 chaperone, AAA+ modules [82421]
  duplication: two AAA+ modules; the first module is structurally similar to the CDC6 module whereas the second module to the HslU module
  1. Escherichia coli [TaxId: 562] [82422] (2)
    SQ Q83LR6
    1. 1r6b
      complexed with adp, mg; mutant
      1. region x:169-436 [104819]
      2. region x:437-751 [104820]
    2. 1ksf
      complexed with adp, ioh, met, mg, pge; mutant
      1. region x:168-436 [77523]
      2. region x:437-755 [77524]
16. ClpB, AAA+ modules [75211]
  ATPase subunit of ATP-dependent protease; similar domain organization to ClpA
  1. Thermus thermophilus [TaxId: 274] [102395] (1)
    1. 1qvr
      complexed with anp, pt
      1. region a:149-535 [96433]
      2. region a:536-850 [96434]
      3. region b:149-535 [96436]
      4. region b:536-850 [96437]
      5. region c:149-535 [96439]
      6. region c:536-850 [96440]
  2. Escherichia coli [TaxId: 562] [75212] (1)
    1. 1jbk
      N-terminal subdomain only
      complexed with mg
      1. chain a [71631]
17. ATPase subunit of magnesium chelatase, BchI [64040]
  1. Rhodobacter capsulatus [TaxId: 1061] [64041] (1)
    1. 1g8p
      CASP4
      1. chain a [60376]
18. Papillomavirus large T antigen helicase domain [89688]
  1. Simian virus 40 [TaxId: 10633] [89689] (16)
    SQ P03070 265-627
    1. 1svm
      complexed with atp, mg, zn
      1. chain a [112126]
      2. chain b [112127]
      3. chain c [112128]
      4. chain d [112129]
      5. chain e [112130]
      6. chain f [112131]
    2. 1svl
      complexed with adp, mg, zn
      1. chain a [112123]
      2. chain b [112124]
      3. chain c [112125]
    3. 1svo
      complexed with zn
      1. chain a [112132]
      2. chain b [112133]
    4. 1n25
      complexed with zn
      1. chain a [85264]
      2. chain b [85265]
    5. 2h1l
      automatically matched to d1svla_
      complexed with zn
      1. region a:266-627 [135947]
    6. 2h1l
      automatically matched to d1svla_
      complexed with zn
      1. region b:266-627 [135948]
    7. 2h1l
      automatically matched to d1svla_
      complexed with zn
      1. region c:266-627 [135949]
    8. 2h1l
      automatically matched to d1svla_
      complexed with zn
      1. region d:266-627 [135950]
    9. 2h1l
      automatically matched to d1svla_
      complexed with zn
      1. region e:266-627 [135951]
    10. 2h1l
      automatically matched to d1svla_
      complexed with zn
      1. region f:266-627 [135952]
    11. 2h1l
      automatically matched to d1svla_
      complexed with zn
      1. region g:266-627 [135953]
    12. 2h1l
      automatically matched to d1svla_
      complexed with zn
      1. region h:266-627 [135954]
    13. 2h1l
      automatically matched to d1svla_
      complexed with zn
      1. region i:266-627 [135955]
    14. 2h1l
      automatically matched to d1svla_
      complexed with zn
      1. region j:266-627 [135956]
    15. 2h1l
      automatically matched to d1svla_
      complexed with zn
      1. region k:266-627 [135957]
    16. 2h1l
      automatically matched to d1svla_
      complexed with zn
      1. region l:266-627 [135958]
19. Rep 40 protein helicase domain [110564]
  1. Adeno-associated virus 2, AAV2 [TaxId: 10804] [110565] (2)
    SQ P03132 225-490
    1. 1u0j
      complexed with adp
      1. chain a [107546]
    2. 1s9h
      1. chain a [105381]
      2. chain b [105382]
      3. chain c [105383]
20. Replication factor C1 [110566]
  1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [110567] (1)
    SQ P38630 295-696
    1. 1sxj
      complexed with adp, atg, mg; mutant
      1. region a:295-547 [106082]
21. Replication factor C4 [110568]
  1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [110569] (1)
    SQ P40339
    1. 1sxj
      complexed with adp, atg, mg; mutant
      1. region b:7-230 [106084]
22. Replication factor C3 [110570]
  1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [110571] (1)
    SQ P38629
    1. 1sxj
      complexed with adp, atg, mg; mutant
      1. region c:12-238 [106086]
23. Replication factor C2 [110572]
  1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [110573] (1)
    SQ P40348
    1. 1sxj
      complexed with adp, atg, mg; mutant
      1. region d:26-262 [106088]
24. Replication factor C5 [110574]
  1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [110575] (1)
    SQ P38251
    1. 1sxj
      complexed with adp, atg, mg; mutant
      1. region e:4-255 [106090]
25. Replication protein E1 helicase domain [110576]
  1. Human papillomavirus type 18 [TaxId: 333761] [110577] (1)
    SQ P06789 428-629 # structure of the origin-binding domain (210-354) is also known, 1r9w (scop_sp 103119)
    1. 1tue
      mutant
      1. chain a [107323]
      2. chain d [107325]
      3. chain f [107327]
      4. chain h [107329]
      5. chain k [107331]
      6. chain m [107333]
26. CDC6-like protein APE0152, N-terminal domain [117556]
  1. Aeropyrum pernix [TaxId: 56636] [117557] (2)
    SQ Q9YFU8
    1. 1w5s
      complexed with adp, so4
      1. region a:7-293 [114252]
      2. region b:7-293 [114254]
    2. 1w5t
      complexed with adp, anp, mg
      1. region a:7-293 [114256]
      2. region b:7-293 [114258]
      3. region c:7-293 [114260]
27. Archaeal ATPase SSO1545 [142326]
  member of Pfam 01637 family; overall structural similarity to the archael CDC6-like protein APE0102
  1. Sulfolobus solfataricus [TaxId: 2287] [142327] (2)
    SQ Q97Y08 1-283
    1. 2fna
      complexed with adp, edo, mg
      1. region a:1-283 [133810]
    2. 2fna
      automatically matched to 2FNA A:1-283
      complexed with adp, edo, mg
      1. region b:1-283 [133812]
28. CED-4, NB-ARC domain [159577]
  belongs to Pfam 00931
  1. Caenorhabditis elegans [TaxId: 6239] [159578] (1)
    SQ P30429 109-385
    1. 2a5y
      complexed with atp, mg; mutant
      1. region b:109-385 [144788]
RNA helicase [52724] (3)
duplication: consists of two similar domains, one binds NTP and the other binds RNA; also contains an all-alpha subdomain in the C-terminal extension
1. HCV helicase domain [52725]
  1. Human hepatitis C virus (HCV), different isolates [TaxId: 11103] [52726] (6)
    1. 1a1v
      protein/DNA complex; complexed with so4; mutant
      1. region a:190-325 [32467]
      2. region a:326-624 [32468]
    2. 1hei
      complexed with ca
      1. region a:187-325 [32463]
      2. region a:326-629 [32464]
      3. region b:188-325 [32465]
      4. region b:326-628 [32466]
    3. 8ohm
      1. region a:190-325 [32469]
      2. region a:326-624 [32470]
    4. 1cu1
      complexed with po4, zn
      1. region a:187-325 [32471]
      2. region a:326-631 [32472]
      3. region b:1187-1325 [32473]
      4. region b:1326-1631 [32474]
    5. 1onb
      an engineered arginine-rich subdomain 2
      1. chain a [87137]
    6. 1jr6
      an engineered arginine-rich subdomain 2
      1. chain a [71821]
2. Dengue virus helicase [142328]
  1. Dengue virus type 2 [TaxId: 11060] [142329] (8)
    SQ Q91H74 1653-1957! SQ Q91H74 1958-2093
    1. 2bmf
      automatically matched to 2BHR A:483-618
      1. region a:483-618 [128791]
    2. 2bmf
      automatically matched to 2BHR A:178-482
      1. region a:178-482 [128792]
    3. 2bmf
      automatically matched to 2BHR A:483-618
      1. region b:483-618 [128793]
    4. 2bmf
      automatically matched to 2BHR A:178-482
      1. region b:178-482 [128794]
    5. 2bhr
      complexed with so4
      1. region a:483-618 [128542]
    6. 2bhr
      complexed with so4
      1. region a:178-482 [128543]
    7. 2bhr
      automatically matched to 2BHR A:483-618
      complexed with so4
      1. region b:483-618 [128544]
    8. 2bhr
      automatically matched to 2BHR A:178-482
      complexed with so4
      1. region b:178-482 [128545]
3. YFV helicase domain [142330]
  1. Yellow fever virus [TaxId: 11089] [142331] (2)
    SQ P19901 1669-1842! SQ P19901 1843-2107
    1. 1yks
      1. region a:185-324 [123561]
    2. 1yks
      1. region a:325-623 [123562]
Helicase-like "domain" of reverse gyrase [69496] (1)
1. Helicase-like "domain" of reverse gyrase [69497]
  contains a mobile insertion of LEM/SAP-like HeH motif, residues 354-423
  1. Archaeon Archaeoglobus fulgidus [TaxId: 2234] [69498] (2)
    1. 1gku
      less ordered regions are modeled as poly-ALA
      mutant
      1. region b:1-250 [65257]
      2. region b:251-498 [65258]
    2. 1gl9
      complexed with anp, mg; mutant
      1. region b:2-250 [65291]
      2. region b:251-498 [65292]
      3. region c:3-250 [65294]
      4. region c:251-498 [65295]
DNA helicase UvsW [102396] (1)
contains extra N-terminal alpha+beta subdomain
1. DNA helicase UvsW [102397]
  1. Bacteriophage T4 [TaxId: 10665] [102398] (1)
    1. 1rif
      complexed with au, mg; mutant
      1. chain a [97507]
      2. chain b [97508]
YjeE-like [75213] (1)
mixed beta-sheet; order 234156(0), strands 2 and 6 are antiparallel to the rest
1. Hypothetical protein HI0065 [75214]
  1. Haemophilus influenzae [TaxId: 727] [75215] (2)
    1. 1htw
      complexed with ADP and magnesium
      complexed with act, adp, mg, na
      1. chain a [71083]
      2. chain b [71084]
      3. chain c [71085]
    2. 1fl9
      structural genomics
      CASP4
      complexed with hg
      1. chain a [70137]
      2. chain b [70138]
      3. chain c [70139]
Type II thymidine kinase [117558] (3)
N-terminal part of Pfam 00265; parallel beta-sheet of 6 strands, order 324516; topological similarity to the RecA-like proteins, especially CobA (scop_pr 52684)
1. Thymidine kinase, TK1, N-terminal domain [117559]
  1. Human (Homo sapiens) [TaxId: 9606] [117560] (3)
    SQ P04183 18-191
    1. 1xbt
      complexed with mg, ttp, zn; mutant
      1. region a:18-150 [115080]
      2. region b:18-150 [115082]
      3. region c:18-150 [115084]
      4. region d:18-150 [115086]
      5. region e:18-150 [115088]
      6. region f:18-150 [115090]
      7. region g:18-150 [115092]
      8. region h:18-150 [115094]
    2. 2orv
      automatically matched to d1xbta1
      complexed with 4ta, zn; mutant
      1. region a:18-150 [139274]
    3. 2orv
      automatically matched to d1xbta1
      complexed with 4ta, zn; mutant
      1. region b:18-150 [139276]
  2. Ureaplasma urealyticum [TaxId: 2130] [117561] (8)
    SQ Q9PPP5 11-211
    1. 2b8t
      complexed with thm, trs, zn
      1. region a:11-149 [128109]
    2. 2b8t
      automatically matched to 2B8T A:11-149
      complexed with thm, trs, zn
      1. region b:11-149 [128111]
    3. 2b8t
      automatically matched to 2B8T A:11-149
      complexed with thm, trs, zn
      1. region c:11-149 [128113]
    4. 2b8t
      automatically matched to 2B8T A:11-149
      complexed with thm, trs, zn
      1. region d:12-149 [128115]
    5. 2uz3
      automatically matched to d1xmra1
      complexed with mg, ttp, zn; mutant
      1. region a:11-149 [140040]
    6. 2uz3
      automatically matched to d1xmra1
      complexed with mg, ttp, zn; mutant
      1. region b:11-149 [140042]
    7. 2uz3
      automatically matched to d1xmra1
      complexed with mg, ttp, zn; mutant
      1. region c:11-149 [140044]
    8. 2uz3
      automatically matched to d1xmra1
      complexed with mg, ttp, zn; mutant
      1. region d:11-149 [140046]
  3. Clostridium acetobutylicum [TaxId: 1488] [117562] (1)
    SQ Q97F65
    1. 1xx6
      Structural genomics target
      complexed with adp, zn
      1. region a:2-142 [116139]
      2. region b:2-142 [116141]
Atu3015-like [142332] (2)
unknown function; similar to the nucleotide/nucleoside kinases
1. Hypothetical protein BH3686 [142333]
  annotated as putative gluconate kinase by NESG
  1. Bacillus halodurans [TaxId: 86665] [142334] (1)
    SQ Q9K6P2 1-176
    1. 2bdt
      complexed with so4
      1. region a:1-176 [128344]
2. Hypothetical protein Atu3015 [142335]
  1. Agrobacterium tumefaciens [TaxId: 358] [142336] (1)
    SQ Q8UBK1 6-181
    1. 1zp6
      complexed with so4
      1. region a:6-181 [125456]