Structural Classification of Proteins
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Protein: Holliday junction helicase RuvB from Thermotoga maritima [TaxId: 2336]

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: P-loop containing nucleoside triphosphate hydrolases [52539]
    3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes
  4. Superfamily: P-loop containing nucleoside triphosphate hydrolases [52540]
    division into families based on beta-sheet topologies
    link to SUPERFAMILY database - Superfamily
  5. Family: Extended AAA-ATPase domain [81269]
    fold is similar to that of RecA, but lacks the last two strands, followed by a family-specific Arg-finger domain
  6. Protein: Holliday junction helicase RuvB [52713]
    contains "winged helix" DNA-binding domain after the family specific domains
  7. Species: Thermotoga maritima [TaxId: 2336] [64037]

PDB Entry Domains:

  1. 1in4 picpicxref
    complexed with act, adp, co, hez
    1. region a:17-254 [62598] picpiclink
  2. 1j7k picpicxref
    complexed with act, atp, co, hez; mutant
    1. region a:19-254 [62696] picpiclink
  3. 1in6 picpicxref
    complexed with act, adp, co; mutant
    1. region a:17-254 [62602] picpiclink
  4. 1in7 picpicxref
    complexed with act, adp; mutant
    1. region a:17-254 [62604] picpiclink
  5. 1in8 picpicxref
    complexed with adp; mutant
    1. region a:17-254 [62606] picpiclink
  6. 1in5 picpicxref
    complexed with adp; mutant
    1. region a:17-254 [62600] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk