Structural Classification of Proteins
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Protein: Rna1p (RanGAP1), N-terminal domain from Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) [52046]
    2 curved layers, a/b; parallel beta-sheet; order 1234...N; there are sequence similarities between different superfamilies
  4. Superfamily: RNI-like [52047]
    regular structure consisting of similar repeats
    link to SUPERFAMILY database - Superfamily
  5. Family: Rna1p (RanGAP1), N-terminal domain [52052]
  6. Protein: Rna1p (RanGAP1), N-terminal domain [52053]
    GTPase-activating protein for SpI1, ortologue of Ran
    duplication: consists of 11 repeats
  7. Species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896] [52054]

PDB Entry Domains:

  1. 2ca6 picpic
    automatically matched to d1k5dc_
    complexed with so4
    1. region a:2-345 [130151] picpiclink
  2. 2ca6 picpic
    automatically matched to d1k5dc_
    complexed with so4
    1. region b:2-345 [130152] picpiclink
  3. 1yrg picpic
    mutant
    1. chain a [30854] picpiclink
    2. chain b [30855] picpiclink
  4. 1k5d picpicxrefxref
    complexed with gnp, mg; mutant
    1. chain c [68170] picpiclink
    2. chain f [68173] picpiclink
    3. chain i [68176] picpiclink
    4. chain l [68179] picpiclink
  5. 1k5g picpicxrefxref
    complexed with af3, gdp, mg; mutant
    1. chain c [68182] picpiclink
    2. chain f [68185] picpiclink
    3. chain i [68188] picpiclink
    4. chain l [68191] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk