Structural Classification of Proteins
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Protein: Nitrogenase iron-molybdenum protein, alpha chain from Azotobacter vinelandii [TaxId: 354]

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: Chelatase-like [53799]
    duplication: tandem repeat of two domains; 3 layers (a/b/a); parallel beta-sheet of 4 strands, order 2134
  4. Superfamily: "Helical backbone" metal receptor [53807]
    contains a long alpha helical insertion in the interdomain linker
    link to SUPERFAMILY database - Superfamily
  5. Family: Nitrogenase iron-molybdenum protein [53816]
    contains three domains of this fold; "Helical backbone" holds domains 2 and 3
    both chains are homologous; the inter-chain arrangement of domains 1 is similar to the intra-chain arrangement of domains 2 and 3
  6. Protein: Nitrogenase iron-molybdenum protein, alpha chain [81402]
  7. Species: Azotobacter vinelandii [TaxId: 354] [81398]

PDB Entry Domains:

  1. 1m1n picpicxref
    complexed with ca, cfn, clf, hca
    1. chain a [78417] picpiclink
    2. chain c [78419] picpiclink
    3. chain e [78421] picpiclink
    4. chain g [78423] picpiclink
  2. 2afh picpicxrefxrefxrefxref
    automatically matched to d1m34a_
    complexed with 1pe, ca, cfn, clf, hca, na, p6g, peg, pg4, pge, sf4, trs
    1. region a:5-480 [126679] picpiclink
  3. 2afh picpicxrefxrefxrefxref
    automatically matched to d1m34a_
    complexed with 1pe, ca, cfn, clf, hca, na, p6g, peg, pg4, pge, sf4, trs
    1. region c:5-480 [126681] picpiclink
  4. 2min picpicxref
    complexed with ca, cfm, clf, hca
    1. chain a [35609] picpiclink
    2. chain c [35611] picpiclink
  5. 3min picpicxref
    complexed with ca, cfm, clf, hca
    1. chain a [35605] picpiclink
    2. chain c [35607] picpiclink
  6. 1m34 picpicxrefxref
    complexed with adp, alf, ca, cfm, clf, fs4, hca, mg
    1. chain a [78515] picpiclink
    2. chain c [78517] picpiclink
    3. chain i [78523] picpiclink
    4. chain k [78525] picpiclink
  7. 2afk picpicxrefxref
    automatically matched to d1m34a_
    complexed with acp, ca, cfn, clf, hca, mg, sf4
    1. region a:5-480 [126694] picpiclink
  8. 2afk picpicxrefxref
    automatically matched to d1m34a_
    complexed with acp, ca, cfn, clf, hca, mg, sf4
    1. region c:5-480 [126696] picpiclink
  9. 1g20 picpicxrefxref
    complexed with ca, cfm, clf, fs4, hca
    1. chain a [35613] picpiclink
    2. chain c [35615] picpiclink
  10. 1fp4 picpicxref
    complexed with ca, cfm, clp, hca; mutant
    1. chain a [76187] picpiclink
    2. chain c [76189] picpiclink
  11. 1l5h picpicxref
    FeMo-cofactor deficient
    complexed with ca, clf
    1. chain a [73590] picpiclink
  12. 1n2c picpicxrefxref
    complexed with adp, alf, ca, cfm, clf, fs4, hca, mg
    1. chain a [35617] picpiclink
    2. chain c [35619] picpiclink
  13. 2afi picpicxrefxrefxrefxref
    automatically matched to d1m34a_
    complexed with adp, ca, cfn, clf, hca, mg, sf4
    1. region a:5-480 [126685] picpiclink
  14. 2afi picpicxrefxrefxrefxref
    automatically matched to d1m34a_
    complexed with adp, ca, cfn, clf, hca, mg, sf4
    1. region c:5-480 [126687] picpiclink
  15. 2afi picpicxrefxrefxrefxref
    automatically matched to d1m34a_
    complexed with adp, ca, cfn, clf, hca, mg, sf4
    1. region i:5-480 [126689] picpiclink
  16. 2afi picpicxrefxrefxrefxref
    automatically matched to d1m34a_
    complexed with adp, ca, cfn, clf, hca, mg, sf4
    1. region k:5-480 [126691] picpiclink
  17. 1g21 picpicxrefxref
    complexed with atp, ca, cfm, clf, fs4, hca, mg
    1. chain a [35621] picpiclink
    2. chain c [35623] picpiclink
  18. 1m1y picpicxrefxref
    chemically crosslinked structure
    complexed with ca, cfm, clf, fs4, hca
    1. chain a [78441] picpiclink
    2. chain c [78443] picpiclink
    3. chain i [78449] picpiclink
    4. chain k [78451] picpiclink

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site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk