Structural Classification of Proteins
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Protein: Initiation factor 4a from Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: P-loop containing nucleoside triphosphate hydrolases [52539]
    3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes
  4. Superfamily: P-loop containing nucleoside triphosphate hydrolases [52540]
    division into families based on beta-sheet topologies
    link to SUPERFAMILY database - Superfamily
  5. Family: Tandem AAA-ATPase domain [81268]
    duplication: tandem repeat of two RecA-like (AAA) domains
  6. Protein: Initiation factor 4a [52706]
    homologous to UvrB
  7. Species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [52707]

PDB Entry Domains:

  1. 1fuk picpic
    C-terminal domain
    complexed with zn
    1. chain a [32409] picpiclink
  2. 1qde picpic
    N-terminal AAA domain; P-loop is empty and in a non-canonical conformation
    complexed with so4
    1. chain a [32410] picpiclink
  3. 1qva picpic
    N-terminal AAA domain; P-loop is empty and in a non-canonical conformation
    1. chain a [32411] picpiclink
  4. 1fuu picpic
    1. chain a [32412] picpiclink
  5. 1fuu picpic
    1. region b:11-225 [32413] picpiclink
    2. region b:226-394 [32414] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk