Structural Classification of Proteins
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Protein: Polynucleotide kinase, phosphatase domain from Bacteriophage T4 [TaxId: 10665]

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: HAD-like [56783]
    3 layers: a/b/a; parallel beta-sheet of 6 strands, order 321456
  4. Superfamily: HAD-like [56784]
    usually contains an insertion (sub)domain after strand 1
    link to SUPERFAMILY database - Superfamily
  5. Family: phosphatase domain of polynucleotide kinase [82385]
    no insertion subdomains
  6. Protein: Polynucleotide kinase, phosphatase domain [82386]
  7. Species: Bacteriophage T4 [TaxId: 10665] [82387]

PDB Entry Domains:

  1. 1ltq picpicxref
    complexed with adp, dms, mse
    1. region a:153-301 [78208] picpiclink
  2. 1rrc picpicxref
    complexed with adp, ca, dms
    1. region a:153-301 [97789] picpiclink
  3. 1rc8 picpicxref
    complexed with adp, ca, dms
    1. region a:153-301 [97291] picpiclink
  4. 2ia5 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1ltqa1
    complexed with ars, mg, so4
    1. region a:153-301 [137133] picpiclink
  5. 2ia5 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1ltqa1
    complexed with ars, mg, so4
    1. region b:153-301 [137135] picpiclink
  6. 2ia5 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1ltqa1
    complexed with ars, mg, so4
    1. region c:153-301 [137137] picpiclink
  7. 2ia5 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1ltqa1
    complexed with ars, mg, so4
    1. region d:153-301 [137139] picpiclink
  8. 2ia5 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1ltqa1
    complexed with ars, mg, so4
    1. region e:153-301 [137141] picpiclink
  9. 2ia5 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1ltqa1
    complexed with ars, mg, so4
    1. region f:153-301 [137143] picpiclink
  10. 2ia5 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1ltqa1
    complexed with ars, mg, so4
    1. region g:153-301 [137145] picpiclink
  11. 2ia5 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1ltqa1
    complexed with ars, mg, so4
    1. region h:153-301 [137147] picpiclink
  12. 2ia5 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1ltqa1
    complexed with ars, mg, so4
    1. region i:153-301 [137149] picpiclink
  13. 2ia5 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1ltqa1
    complexed with ars, mg, so4
    1. region j:153-301 [137151] picpiclink
  14. 2ia5 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1ltqa1
    complexed with ars, mg, so4
    1. region k:153-301 [137153] picpiclink
  15. 2ia5 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1ltqa1
    complexed with ars, mg, so4
    1. region l:153-301 [137155] picpiclink
  16. 1rpz picpicxref
    complexed with adp, ca, dms
    1. region a:153-301 [97720] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk