Structural Classification of Proteins
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Protein: Rad50 from Archaeon Pyrococcus furiosus [TaxId: 2261]

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: P-loop containing nucleoside triphosphate hydrolases [52539]
    3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes
  4. Superfamily: P-loop containing nucleoside triphosphate hydrolases [52540]
    division into families based on beta-sheet topologies
    link to SUPERFAMILY database - Superfamily
  5. Family: ABC transporter ATPase domain-like [52686]
    there are two additional subdomains inserted into the central core that has a RecA-like topology
  6. Protein: Rad50 [52691]
  7. Species: Archaeon Pyrococcus furiosus [TaxId: 2261] [52692]

PDB Entry Domains:

  1. 1f2t picpic
    N- and C-terminal subdomains only; the middle coiled coil domain is deleted
    1. chain a,b [32373] picpiclink
  2. 1f2u picpic
    N- and C-terminal subdomains only; the middle coiled coil domain is deleted
    complexed with atp, mg
    1. chain a,b [32374] picpiclink
    2. chain c,d [32375] picpiclink
  3. 1us8 picpic
    N- and C-terminal subdomains only; the middle coiled coil domain is deleted
    mutant
    1. chain a,b [99859] picpiclink
  4. 1ii8 picpic
    N- and C-terminal subdomains; include a small fragment of the middle coiled coil domain
    complexed with po4
    1. chain a,b [62417] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk