Structural Classification of Proteins
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Protein: Rab5a from Human (Homo sapiens) [TaxId: 9606]

SQ P20339 18-182

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: P-loop containing nucleoside triphosphate hydrolases [52539]
    3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes
  4. Superfamily: P-loop containing nucleoside triphosphate hydrolases [52540]
    division into families based on beta-sheet topologies
    link to SUPERFAMILY database - Superfamily
  5. Family: G proteins [52592]
    core: mixed beta-sheet of 6 strands, order 231456; strand 2 is antiparallel to the rest
  6. Protein: Rab5a [82399]
  7. Species: Human (Homo sapiens) [TaxId: 9606] [82400]
    SQ P20339 18-182

PDB Entry Domains:

  1. 1r2q picpic
    complexed with gnp, gol, mg
    1. chain a [96874] picpiclink
  2. 1n6h picpic
    complexed with bme, gnp, mg
    1. chain a [80197] picpiclink
  3. 1n6p picpic
    complexed with gnp, mg; mutant
    1. chain a [80203] picpiclink
  4. 1n6r picpic
    complexed with bme, gnp, mg; mutant
    1. chain a [80211] picpiclink
  5. 1n6k picpic
    complexed with af3, bme, gdp, mg; mutant
    1. chain a [80199] picpiclink
  6. 1n6n picpic
    complexed with bme, gnp, mg; mutant
    1. chain a [80201] picpiclink
  7. 1n6l picpic
    complexed with bme, gtp, mg; mutant
    1. chain a [80200] picpiclink
  8. 1n6i picpic
    complexed with bme, gdp, mg; mutant
    1. chain a [80198] picpiclink
  9. 1n6o picpic
    complexed with bme, gnp, mg; mutant
    1. chain a [80202] picpiclink
  10. 1tu4 picpic
    complexed with co, gdp, so4
    1. chain a [112649] picpiclink
    2. chain b [112650] picpiclink
    3. chain c [112651] picpiclink
    4. chain d [112652] picpiclink
  11. 1tu3 picpicxref
    complexed with gnp, mg
    1. chain a [112639] picpiclink
    2. chain b [112640] picpiclink
    3. chain c [112641] picpiclink
    4. chain d [112642] picpiclink
    5. chain e [112643] picpiclink

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MRC
site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk