Structural Classification of Proteins
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Protein: Rab-related protein Sec4 from Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: P-loop containing nucleoside triphosphate hydrolases [52539]
    3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes
  4. Superfamily: P-loop containing nucleoside triphosphate hydrolases [52540]
    division into families based on beta-sheet topologies
    link to SUPERFAMILY database - Superfamily
  5. Family: G proteins [52592]
    core: mixed beta-sheet of 6 strands, order 231456; strand 2 is antiparallel to the rest
  6. Protein: Rab-related protein Sec4 [52607]
  7. Species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [52608]

PDB Entry Domains:

  1. 1g16 picpic
    complexed with co, gdp
    1. chain a [32022] picpiclink
    2. chain b [32023] picpiclink
    3. chain c [32024] picpiclink
    4. chain d [32025] picpiclink
  2. 1g17 picpic
    complexed with gtn, mg
    1. chain a [32026] picpiclink
    2. chain b [32027] picpiclink
  3. 3cph picpicxrefxrefxrefxrefxrefxref
    automatically matched to d2ocyc1
    complexed with gdp, mg
    1. region a:20-186 [156886] picpiclink
  4. 2eqb picpicxrefxref
    automatically matched to 2OCY C:18-186
    complexed with po4
    1. region a:19-186 [132286] picpiclink
  5. 2ocy picpicxrefxref
    1. region c:18-186 [139023] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk