Structural Classification of Proteins

Fold: P-loop containing nucleoside triphosphate hydrolases

: 3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes

Lineage:

Root: scop
Class: Alpha and beta proteins (a/b) [51349]
Mainly parallel beta sheets (beta-alpha-beta units)
Fold: P-loop containing nucleoside triphosphate hydrolases [52539]
3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes

Superfamilies:

P-loop containing nucleoside triphosphate hydrolases [52540] (24)
division into families based on beta-sheet topologies
uperfamily
1. Nucleotide and nucleoside kinases [52541] (46)
  parallel beta-sheet of 5 strands, order 23145
  1. Guanylate kinase [52542]
    1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [52543] (3)
      1. 1gky
        complexed with 5gp, so4
        
        chain a [31839]
      2. 1ex7
        complexed with 5gp, so4
        
        chain a [59537]
      3. 1ex6
        
        chain a [59535]
        chain b [59536]
    2. Mouse (Mus musculus) [TaxId: 10090] [82393] (1)
      1. 1lvg
        complexed with 5gp, adp, k
        
        chain a [78242]
    3. Escherichia coli [TaxId: 562] [102338] (18)
      1. 1s96
        complexed with po4, unx
        
        chain a [98740]
        chain b [98741]
      2. 2an9
        automatically matched to d1s96a_
        complexed with gdp, gmp, k
        
        region a:3-206 [127037]
      3. 2an9
        automatically matched to d1s96a_
        complexed with gdp, gmp, k
        
        region b:3-206 [127038]
      4. 2f3r
        automatically matched to d1s96a_
        complexed with g5p
        
        region a:3-206 [132890]
      5. 2f3r
        automatically matched to d1s96a_
        complexed with g5p
        
        region b:3-204 [132891]
      6. 2anb
        automatically matched to d1s96a_
        complexed with 5gp, so4
        
        region a:3-206 [127039]
      7. 2f3t
        automatically matched to d1s96a_
        complexed with lgp
        
        region a:3-206 [132893]
      8. 2f3t
        automatically matched to d1s96a_
        complexed with lgp
        
        region b:3-206 [132894]
      9. 2f3t
        automatically matched to d1s96a_
        complexed with lgp
        
        region c:3-206 [132895]
      10. 2f3t
        automatically matched to d1s96a_
        complexed with lgp
        
        region d:3-206 [132896]
      11. 2f3t
        automatically matched to d1s96a_
        complexed with lgp
        
        region e:3-205 [132897]
      12. 2f3t
        automatically matched to d1s96a_
        complexed with lgp
        
        region f:3-206 [132898]
      13. 2anc
        automatically matched to d1s96a_
        
        region a:3-206 [127040]
      14. 2anc
        automatically matched to d1s96a_
        
        region b:3-205 [127041]
      15. 2anc
        automatically matched to d1s96a_
        
        region c:3-206 [127042]
      16. 2anc
        automatically matched to d1s96a_
        
        region d:3-206 [127043]
      17. 2anc
        automatically matched to d1s96a_
        
        region e:3-205 [127044]
      18. 2anc
        automatically matched to d1s96a_
        
        region f:3-206 [127045]
    4. Mycobacterium tuberculosis [TaxId: 1773] [102339] (5)
      Rv1389
      1. 1znw
        automatically matched to d1s4qa_
        
        region a:20-201 [125412]
      2. 1s4q
        complexed with cl, fmt
        
        chain a [98507]
      3. 1zny
        automatically matched to d1s4qa_
        complexed with gdp
        
        region a:20-201 [125414]
      4. 1znx
        automatically matched to d1s4qa_
        complexed with 5gp
        
        region a:20-201 [125413]
      5. 1znz
        automatically matched to d1s4qa_
        complexed with gdp
        
        region a:20-201 [125415]
  2. Guanylate kinase-like domain of Cask [69474]
    1. Human (Homo sapiens) [TaxId: 9606] [69475] (1)
      1. 1kgd
        complexed with fmt
        
        chain a [68582]
  3. Guanylate kinase-like domain of Psd-95 [69476]
    1. Rat (Rattus norvegicus) [TaxId: 10116] [69477] (3)
      1. 1kjw
        complexed with so4
        
        region a:526-724 [68644]
      2. 1jxm
        complexed with 5gp, gai, mpd
        
        region a:526-724 [67421]
      3. 1jxo
        
        region a:526-720 [67423]
        region b:526-720 [67425]
  4. Uridylate kinase [52544]
    1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [52545] (2)
      1. 1ukz
        complexed with adp, amp
        
        chain a [31840]
      2. 1uky
        complexed with adp
        
        chain a [31841]
  5. Deoxynucleoside monophosphate kinase [52546]
    contains insert 4-helical bundle subdomain, residues 35-145
    1. Bacteriophage T4 [TaxId: 10665] [52547] (2)
      1. 1dek
        complexed with dgp, mg
        
        chain a [31842]
        chain b [31843]
      2. 1del
        complexed with amp, dgp, mg
        
        chain a [31844]
        chain b [31845]
  6. Deoxyribonucleoside kinase [69478]
    1. Fruit fly (Drosophila melanogaster) [TaxId: 7227] [69479] (37)
      1. 2vp4
        automatically matched to d1oe0a_
        complexed with dcp
        
        region a:12-208 [153399]
      2. 2vp4
        automatically matched to d1oe0a_
        complexed with dcp
        
        region b:12-208 [153400]
      3. 2vp4
        automatically matched to d1oe0a_
        complexed with dcp
        
        region c:12-208 [153401]
      4. 2vp4
        automatically matched to d1oe0a_
        complexed with dcp
        
        region d:12-208 [153402]
      5. 1oe0
        complexed with mg, ttp; mutant
        
        chain a [92788]
        chain b [92789]
        chain c [92790]
        chain d [92791]
      6. 2vp0
        automatically matched to d1oe0a_
        complexed with mg, ttp
        
        region a:12-208 [153395]
      7. 2vp0
        automatically matched to d1oe0a_
        complexed with mg, ttp
        
        region b:12-208 [153396]
      8. 2vp5
        automatically matched to d1oe0a_
        complexed with dcz, so4
        
        region a:18-208 [153403]
      9. 2vp5
        automatically matched to d1oe0a_
        complexed with dcz, so4
        
        region b:18-208 [153404]
      10. 2vp2
        automatically matched to d1oe0a_
        complexed with dgt
        
        region a:12-208 [153397]
      11. 2vp2
        automatically matched to d1oe0a_
        complexed with dgt
        
        region b:12-208 [153398]
      12. 1ot3
        complexed with so4, thm
        
        chain a [87400]
        chain b [87401]
        chain c [87402]
        chain d [87403]
        chain e [87404]
        chain f [87405]
        chain g [87406]
        chain h [87407]
      13. 1j90
        CASP4
        complexed with dcz, so4; mutant
        
        chain a [66448]
        chain b [66449]
      14. 2jj8
        automatically matched to d1oe0a_
        complexed with azz, so4
        
        region a:12-208 [148129]
      15. 2jj8
        automatically matched to d1oe0a_
        complexed with azz, so4
        
        region b:12-208 [148130]
      16. 2jj8
        automatically matched to d1oe0a_
        complexed with azz, so4
        
        region c:12-208 [148131]
      17. 2jj8
        automatically matched to d1oe0a_
        complexed with azz, so4
        
        region d:12-208 [148132]
      18. 2vqs
        automatically matched to d1oe0a_
        complexed with bvd, so4
        
        region a:12-208 [153465]
      19. 2vqs
        automatically matched to d1oe0a_
        complexed with bvd, so4
        
        region b:12-208 [153466]
      20. 2vqs
        automatically matched to d1oe0a_
        complexed with bvd, so4
        
        region c:12-208 [153467]
      21. 2vqs
        automatically matched to d1oe0a_
        complexed with bvd, so4
        
        region d:12-208 [153468]
      22. 2vp9
        automatically matched to d1oe0a_
        complexed with doc, so4
        
        region a:12-208 [153413]
      23. 2vp9
        automatically matched to d1oe0a_
        complexed with doc, so4
        
        region b:12-208 [153414]
      24. 2vp9
        automatically matched to d1oe0a_
        complexed with doc, so4
        
        region c:12-208 [153415]
      25. 2vp9
        automatically matched to d1oe0a_
        complexed with doc, so4
        
        region d:12-208 [153416]
      26. 2vp9
        automatically matched to d1oe0a_
        complexed with doc, so4
        
        region e:12-208 [153417]
      27. 2vp9
        automatically matched to d1oe0a_
        complexed with doc, so4
        
        region f:12-208 [153418]
      28. 2vp9
        automatically matched to d1oe0a_
        complexed with doc, so4
        
        region g:12-208 [153419]
      29. 2vp9
        automatically matched to d1oe0a_
        complexed with doc, so4
        
        region h:12-208 [153420]
      30. 2vp6
        automatically matched to d1oe0a_
        complexed with 5fu, so4
        
        region a:12-208 [153405]
      31. 2vp6
        automatically matched to d1oe0a_
        complexed with 5fu, so4
        
        region b:12-208 [153406]
      32. 2vp6
        automatically matched to d1oe0a_
        complexed with 5fu, so4
        
        region c:12-208 [153407]
      33. 2vp6
        automatically matched to d1oe0a_
        complexed with 5fu, so4
        
        region d:12-208 [153408]
      34. 2vp6
        automatically matched to d1oe0a_
        complexed with 5fu, so4
        
        region e:12-208 [153409]
      35. 2vp6
        automatically matched to d1oe0a_
        complexed with 5fu, so4
        
        region f:12-208 [153410]
      36. 2vp6
        automatically matched to d1oe0a_
        complexed with 5fu, so4
        
        region g:12-208 [153411]
      37. 2vp6
        automatically matched to d1oe0a_
        complexed with 5fu, so4
        
        region h:12-208 [153412]
  7. Deoxycytidine kinase [89657]
    1. Human (Homo sapiens) [TaxId: 9606] [89658] (13)
      1. 1p5z
        complexed with adp, ar3, mo3
        
        chain b [87815]
      2. 1p62
        complexed with adp, geo, mo3
        
        chain b [87819]
      3. 1p60
        complexed with adp, dcz
        
        chain a [87816]
        chain b [87817]
      4. 1p61
        complexed with adp, dcz
        
        chain b [87818]
      5. 2a7q
        automatically matched to d1p60a_
        complexed with adp, cfb, mg
        
        region a:20-260 [126352]
      6. 2qro
        automatically matched to d1p60a_
        complexed with d5m, mg, udp
        
        region a:20-260 [151301]
      7. 2qro
        automatically matched to d1p60a_
        complexed with d5m, mg, udp
        
        region b:20-260 [151302]
      8. 2qro
        automatically matched to d1p60a_
        complexed with d5m, mg, udp
        
        region c:20-260 [151303]
      9. 2qro
        automatically matched to d1p60a_
        complexed with d5m, mg, udp
        
        region d:20-260 [151304]
      10. 2qrn
        automatically matched to d1p60a_
        complexed with dcm, mg, udp
        
        region a:20-260 [151297]
      11. 2qrn
        automatically matched to d1p60a_
        complexed with dcm, mg, udp
        
        region b:20-260 [151298]
      12. 2qrn
        automatically matched to d1p60a_
        complexed with dcm, mg, udp
        
        region c:20-260 [151299]
      13. 2qrn
        automatically matched to d1p60a_
        complexed with dcm, mg, udp
        
        region d:20-260 [151300]
  8. Deoxyguanosine kinase [69480]
    1. Human (Homo sapiens) [TaxId: 9606] [69481] (8)
      1. 2ocp
        automatically matched to d1jaga_
        complexed with dtp
        
        region a:37-277 [139012]
      2. 2ocp
        automatically matched to d1jaga_
        complexed with dtp
        
        region b:37-277 [139013]
      3. 2ocp
        automatically matched to d1jaga_
        complexed with dtp
        
        region c:37-277 [139014]
      4. 2ocp
        automatically matched to d1jaga_
        complexed with dtp
        
        region d:37-277 [139015]
      5. 2ocp
        automatically matched to d1jaga_
        complexed with dtp
        
        region e:37-277 [139016]
      6. 2ocp
        automatically matched to d1jaga_
        complexed with dtp
        
        region f:37-277 [139017]
      7. 2ocp
        automatically matched to d1jaga_
        complexed with dtp
        
        region g:37-277 [139018]
      8. 2ocp
        automatically matched to d1jaga_
        complexed with dtp
        
        region h:37-277 [139019]
  9. CMP kinase [52548]
    1. Escherichia coli [TaxId: 562] [52549] (6)
      1. 1cke
        complexed with so4
        
        chain a [31846]
      2. 1kdo
        complexed with c, so4
        
        chain a [68478]
        chain b [68479]
      3. 1kdt
        complexed with doc, so4
        
        chain a [68484]
        chain b [68485]
      4. 2cmk
        complexed with cdp, so4
        
        chain a [31847]
      5. 1kdp
        complexed with c, so4
        
        chain a [68480]
        chain b [68481]
      6. 1kdr
        complexed with car, so4
        
        chain a [68482]
        chain b [68483]
    2. Streptococcus pneumoniae [TaxId: 1313] [110525] (1)
      SQ Q97PK6
      1. 1q3t
        
        chain a [104525]
  10. UMP/CMP kinase [52550]
    1. Dictyostelium discoideum [TaxId: 44689] [52551] (6)
      1. 1qf9
        complexed with adp, alf, c5p, mg
        
        chain a [31848]
      2. 3ukd
        complexed with adp, af3, c5p, mg
        
        chain a [31849]
      3. 4ukd
        complexed with adp, bf2, mg, udp
        
        chain a [31850]
      4. 5ukd
        complexed with adp, af3, c5p, mg
        
        chain a [31851]
      5. 2ukd
        complexed with adp, c5p, mg
        
        chain a [31852]
      6. 1uke
        complexed with mg, up5
        
        chain a [31853]
    2. Human (Homo sapiens) [TaxId: 9606] [110526] (1)
      SQ P30085
      1. 1tev
        complexed with so4
        
        chain a [106817]
  11. Thymidine kinase [52552]
    contains insert all-alpha subdomain, res. 251-322
    1. Herpes simplex virus type 1, different strains [TaxId: 10298] [52553] (22)
      SQ P03176 46-375
      1. 1e2k
        complexed with so4, tmc; mutant
        
        chain a [31854]
        chain b [31855]
      2. 1of1
        complexed with sct, so4
        
        chain a [103924]
        chain b [103925]
      3. 1e2h
        complexed with so4
        
        chain a [31856]
        chain b [31857]
      4. 1e2i
        complexed with aps, arp, so4
        
        chain a [31858]
        chain b [31859]
      5. 1e2n
        complexed with rca, so4
        
        chain a [59168]
        chain b [59169]
      6. 1qhi
        complexed with bpg, so4
        
        chain a [31860]
        chain b [31861]
      7. 1e2m
        complexed with hpt, so4
        
        chain a [59166]
        chain b [59167]
      8. 2ki5
        complexed with ac2, so4
        
        chain a [31862]
        chain b [31863]
      9. 1kim
        complexed with so4, thm
        
        chain a [31864]
        chain b [31865]
      10. 1p7c
        complexed with so4, t5a, thm
        
        chain a [94217]
        chain b [94218]
      11. 1e2p
        complexed with ccv, so4
        
        chain a [59170]
        chain b [59171]
      12. 1ki8
        complexed with bvd, so4
        
        chain a [31866]
        chain b [31867]
      13. 1e2l
        complexed with so4, tmc; mutant
        
        chain a [31872]
        chain b [31873]
      14. 1e2j
        complexed with so4, thm; mutant
        
        chain a [31874]
        chain b [31875]
      15. 1ki7
        complexed with id2, so4
        
        chain a [31868]
        chain b [31869]
      16. 1ki2
        complexed with ga2, so4
        
        chain a [31870]
        chain b [31871]
      17. 1ki6
        complexed with ahu, so4
        
        chain a [31876]
        chain b [31877]
      18. 1vtk
        complexed with adp, tmp
        
        chain a [31882]
      19. 1ki4
        complexed with btd, so4
        
        chain a [31878]
        chain b [31879]
      20. 2vtk
        complexed with adp, thm
        
        chain a [31883]
      21. 1ki3
        complexed with pe2, so4
        
        chain a [31880]
        chain b [31881]
      22. 3vtk
        complexed with 5iu, adp
        
        chain a [31884]
    2. Equine herpesvirus type 4 [TaxId: 10331] [102340] (4)
      1. 1p6x
        complexed with so4, thm
        
        chain a [94195]
        chain b [94196]
      2. 1p72
        complexed with adp, so4, thm
        
        chain a [94200]
        chain b [94201]
      3. 1p73
        complexed with 4ta, so4
        
        chain a [94202]
        chain b [94203]
        chain c [94204]
        chain d [94205]
      4. 1p75
        complexed with so4, t5a
        
        chain a [94210]
        chain b [94211]
        chain c [94212]
        chain d [94213]
    3. Varicella-zoster virus [TaxId: 10335] [89659] (1)
      1. 1osn
        complexed with adp, bvp
        
        chain a [87387]
        chain b [87388]
        chain c [87389]
        chain d [87390]
  12. Adenylate kinase [52554]
    1. Pig (Sus scrofa) [TaxId: 9823] [52555] (1)
      1. 3adk
        complexed with so4
        
        chain a [31885]
    2. Archaeon Sulfolobus acidocaldarius [TaxId: 2285] [52556] (1)
      1. 1nks
        complexed with adp, amp
        
        chain a [31886]
        chain b [31887]
        chain c [31888]
        chain d [31889]
        chain e [31890]
        chain f [31891]
    3. Archaeon Methanococcus voltae [TaxId: 2188] [89660] (1)
      1. 1kht
        complexed with amp
        
        chain a [84401]
        chain b [84402]
        chain c [84403]
    4. Archaeon Methanococcus thermolithotrophicus [TaxId: 2186] [89661] (1)
      1. 1ki9
        
        chain a [84404]
        chain b [84405]
        chain c [84406]
    5. Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913] [52557] (1)
      contains a rudiment "zinc-finger" subdomain, residue 125-161
      1. 2ak3
        complexed with amp, so4
        
        region a:0-124,a:162-225 [31892]
        region b:0-124,b:162-220 [31893]
    6. Cow (Bos taurus), mitochondrial izozyme-2 [TaxId: 9913] [52558] (2)
      contains a rudiment "zinc-finger" subdomain, residue 147-176
      1. 1ak2
        complexed with so4
        
        region a:14-146,a:177-233 [31894]
      2. 2ak2
        complexed with so4
        
        region a:14-146,a:177-233 [31895]
    7. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [52559] (4)
      contains a rudiment "zinc-finger" subdomain, residue 131-168
      1. 1aky
        complexed with ap5, imd
        
        region a:3-130,a:169-220 [31896]
      2. 2aky
        complexed with ap5, mg
        
        region a:3-130,a:169-220 [31897]
      3. 3aky
        complexed with ap5, imd; mutant
        
        region a:3-130,a:169-220 [31898]
      4. 1dvr
        complexed with atf; mutant
        
        region a:1-130,a:169-220 [31899]
        region b:1-130,b:169-220 [31900]
    8. Escherichia coli [TaxId: 562] [52560] (6)
      contains a rudiment "zinc-finger" subdomain, residue 122-156
      1. 1e4v
        complexed with ap5; mutant
        
        region a:1-121,a:157-214 [31903]
        region b:1-121,b:157-214 [31904]
      2. 1e4y
        complexed with ap5; mutant
        
        region a:1-121,a:157-214 [31901]
        region b:1-121,b:157-214 [31902]
      3. 1ake
        complexed with ap5
        
        region a:1-121,a:157-214 [31905]
        region b:1-121,b:157-214 [31906]
      4. 1ank
        complexed with amp, anp
        
        region a:1-121,a:157-214 [31907]
        region b:1-121,b:157-214 [31908]
      5. 4ake
        
        region a:1-121,a:157-214 [31909]
        region b:1-121,b:157-214 [31910]
      6. 2eck
        complexed with adp, amp
        
        region a:1-121,a:157-214 [31911]
        region b:1-121,b:157-214 [31912]
    9. Maize (Zea mays) [TaxId: 4577] [52561] (1)
      1. 1zak
        contains a rudiment "zinc-finger" subdomain, residue 128-158
        complexed with ap5
        
        region a:3-127,a:159-222 [31913]
        region b:3-127,b:159-222 [31914]
    10. Bacillus stearothermophilus [TaxId: 1422] [52562] (3)
      contains a zinc-finger subdomain, residues 126-160
      1. 1zin
        complexed with ap5, zn
        
        region a:1-125,a:161-217 [31915]
      2. 1zip
        complexed with ap5, mn, zn
        
        region a:1-125,a:161-217 [31916]
      3. 1zio
        complexed with ap5, mg, zn
        
        region a:1-125,a:161-217 [31917]
    11. Bacillus subtilis [TaxId: 1423] [102341] (1)
      contains a zinc-finger subdomain, residues 126-160
      1. 1p3j
        complexed with ap5, mg, zn
        
        region a:1-125,a:161-212 [94022]
    12. Bacillus globisporus [TaxId: 1459] [102342] (1)
      contains a zinc-finger subdomain, residues 126-160
      1. 1s3g
        complexed with ap5, zn
        
        region a:1-125,a:161-217 [98433]
    13. Mycobacterium tuberculosis [TaxId: 1773] [102343] (2)
      contains no zinc finger-like insertion
      1. 2cdn
        automatically matched to d1p4sa_
        complexed with adp, mg
        
        region a:1-181 [130289]
      2. 1p4s
        
        chain a [94117]
    14. Human (Homo sapiens), isoenzyme 6 [TaxId: 9606] [117527] (1)
      SQ Q9Y3D8
      1. 1rkb
        complexed with li, so4
        
        chain a [111854]
  13. Thymidylate kinase [52563]
    1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [52564] (3)
      1. 1tmk
        complexed with so4, tmp
        
        chain a [31918]
        chain b [31919]
      2. 3tmk
        complexed with t5a
        
        chain a [31920]
        chain b [31921]
        chain c [31922]
        chain d [31923]
        chain e [31924]
        chain f [31925]
        chain g [31926]
        chain h [31927]
      3. 2tmk
        complexed with atm, so4
        
        chain a [31928]
        chain b [31929]
    2. Human (Homo sapiens) [TaxId: 9606] [64010] (20)
      1. 1nn5
        complexed with 2dt, anp, mg; mutant
        
        chain a [85892]
      2. 1nmy
        complexed with adp, anp, fdm, mg; mutant
        
        chain a [85883]
      3. 1e9e
        complexed with adp, mg, tmp; mutant
        
        chain a [64810]
      4. 1nn3
        complexed with 2dt, adp, mg; mutant
        
        chain a [85887]
      5. 1e9a
        complexed with mg, z5a; mutant
        
        chain a [64806]
      6. 1e9c
        complexed with adp, anp, mg, tmp; mutant
        
        chain a [64808]
      7. 1e9b
        complexed with adp, anp, atm, mg; mutant
        
        chain a [64807]
      8. 1e2d
        complexed with adp, mg, tmp; mutant
        
        chain a [59162]
      9. 1e2f
        complexed with adp, anp, mg, tmp; mutant
        
        chain a [59164]
      10. 1nmx
        complexed with adp, fdm, mg; mutant
        
        chain a [85882]
      11. 1nn0
        complexed with 2dt, adp, mg; mutant
        
        chain a [85885]
      12. 1e2q
        complexed with atp, mg, tmp; mutant
        
        chain a [59172]
      13. 1e2g
        complexed with adp, mg, tmp, tyd; mutant
        
        chain a [59165]
      14. 1nmz
        complexed with anp, mg, nym; mutant
        
        chain a [85884]
      15. 1e9d
        complexed with adp, atm, mg; mutant
        
        chain a [64809]
      16. 1e99
        complexed with adp, atm, mg; mutant
        
        chain a [64805]
      17. 1nn1
        complexed with 2dt, anp, mg; mutant
        
        chain a [85886]
      18. 1e98
        complexed with adp, atm, mg; mutant
        
        chain a [64804]
      19. 1e2e
        complexed with adp, af3, mg, tmp; mutant
        
        chain a [59163]
      20. 1e9f
        complexed with adp, mg, tmp; mutant
        
        chain a [64811]
    3. Escherichia coli [TaxId: 562] [52565] (2)
      1. 4tmk
        complexed with t5a
        
        chain a [31930]
      2. 5tmp
        complexed with z5a
        
        chain a [31931]
    4. Mycobacterium tuberculosis [TaxId: 1773] [69482] (13)
      1. 1gsi
        complexed with act, mg, so4, tmp
        
        chain a [70396]
      2. 1gtv
        complexed with act, mg, so4, tmp, tyd
        
        chain a [70537]
        chain b [70538]
      3. 1n5i
        complexed with atp, flc, so4, tmp
        
        chain a [85330]
      4. 1n5j
        complexed with mg, so4, ttp, tyd
        
        chain a [85331]
      5. 1g3u
        complexed with mg, sul, tmp
        
        chain a [65132]
      6. 1n5k
        complexed with act, mg, tmp
        
        chain a [85332]
        chain b [85333]
      7. 1w2g
        automatically matched to d1g3ua_
        complexed with act, thm
        
        region a:1-208 [120580]
      8. 1w2g
        automatically matched to d1g3ua_
        complexed with act, thm
        
        region b:1-208 [120581]
      9. 1mrs
        complexed with 5hu, mg, so4
        
        chain a [79424]
      10. 1w2h
        automatically matched to d1g3ua_
        complexed with act, atm
        
        region a:1-208 [120582]
      11. 1w2h
        automatically matched to d1g3ua_
        complexed with act, atm
        
        region b:1-208 [120583]
      12. 1n5l
        complexed with act, dpo, mg, tmp, tyd
        
        chain a [85334]
        chain b [85335]
      13. 1mrn
        complexed with mg, so4, t5a
        
        chain a [79423]
  14. Dephospho-CoA kinase [75187]
    1. Haemophilus influenzae [TaxId: 727] [75188] (1)
      1. 1jjv
        complexed with atp, hg, so4
        
        chain a [71698]
    2. Escherichia coli [TaxId: 562] [82394] (5)
      1. 1vht
        structural genomics
        complexed with act, ba3
        
        chain a [100700]
        chain b [100701]
        chain c [100702]
      2. 1vhl
        structural genomics
        complexed with act, adp
        
        chain a [100688]
        chain b [100689]
        chain c [100690]
      3. 1n3b
        complexed with mse, so4
        
        chain a [79959]
        chain b [79960]
        chain c [79961]
      4. 1viy
        structural genomics
        complexed with so4
        
        chain a [100781]
        chain b [100782]
        chain c [100783]
      5. 1t3h
        structural genomics; NESG target ER57
        complexed with so4
        
        chain a [99117]
        chain b [99118]
        chain c [99119]
    3. Thermus thermophilus [TaxId: 274] [102344] (1)
      TT1252
      1. 1uf9
        structural genomics
        complexed with atp, po4
        
        chain a [99326]
        chain b [99327]
        chain c [99328]
  15. Transcriptional regulator NadR, ribosylnicotinamide kinase domain [75189]
    1. Haemophilus influenzae [TaxId: 727] [75190] (1)
      1. 1lw7
        complexed with mse, nad, so4
        
        region a:220-411 [74296]
  16. Polynucleotide kinase, kinase domain [75191]
    1. Bacteriophage T4 [TaxId: 10665] [75192] (17)
      1. 1ly1
        complexed with so4
        
        chain a [74334]
      2. 1ltq
        complexed with adp, dms, mse
        
        region a:1-152 [78209]
      3. 1rrc
        complexed with adp, ca, dms
        
        region a:1-152 [97790]
      4. 1rc8
        complexed with adp, ca, dms
        
        region a:1-152 [97292]
      5. 2ia5
        automatically matched to d1ltqa2
        complexed with ars, mg, so4
        
        region a:1-152 [137134]
      6. 2ia5
        automatically matched to d1ltqa2
        complexed with ars, mg, so4
        
        region b:1-152 [137136]
      7. 2ia5
        automatically matched to d1ltqa2
        complexed with ars, mg, so4
        
        region c:1-152 [137138]
      8. 2ia5
        automatically matched to d1ltqa2
        complexed with ars, mg, so4
        
        region d:1-152 [137140]
      9. 2ia5
        automatically matched to d1ltqa2
        complexed with ars, mg, so4
        
        region e:1-152 [137142]
      10. 2ia5
        automatically matched to d1ltqa2
        complexed with ars, mg, so4
        
        region f:1-152 [137144]
      11. 2ia5
        automatically matched to d1ltqa2
        complexed with ars, mg, so4
        
        region g:3-152 [137146]
      12. 2ia5
        automatically matched to d1ltqa2
        complexed with ars, mg, so4
        
        region h:1-152 [137148]
      13. 2ia5
        automatically matched to d1ltqa2
        complexed with ars, mg, so4
        
        region i:1-152 [137150]
      14. 2ia5
        automatically matched to d1ltqa2
        complexed with ars, mg, so4
        
        region j:1-152 [137152]
      15. 2ia5
        automatically matched to d1ltqa2
        complexed with ars, mg, so4
        
        region k:1-152 [137154]
      16. 2ia5
        automatically matched to d1ltqa2
        complexed with ars, mg, so4
        
        region l:1-152 [137156]
      17. 1rpz
        complexed with adp, ca, dms
        
        region a:1-152 [97721]
  17. Guanylate kinase-like domain of the L-type calcium channel [110527]
    1. Rabbit (Oryctolagus cuniculus) [TaxId: 9986] [110528] (4)
      SQ P54288 234-451
      1. 1t0h
        complexed with cl
        
        chain b [106208]
      2. 1t0j
        complexed with cl
        
        chain b [106212]
      3. 1t3l
        mutant
        
        region a:218-415 [106359]
      4. 1t3s
        complexed with hg; mutant
        
        region a:218-415 [106380]
    2. Rat (Rattus norvegicus) [TaxId: 10116] [110529] (3)
      SQ P54287 38-362
      1. 1vyu
        
        region a:175-361 [108915]
        region b:175-361 [108917]
      2. 1vyt
        
        region a:175-361 [108909]
        region b:175-361 [108911]
      3. 1vyv
        beta4 isoform with odd numbering
        
        region a:216-402 [108919]
        region b:216-402 [108921]
  18. Probable kinase LmjF30.1890 [117528]
    1. Leishmania major [TaxId: 5664] [117529] (1)
      SQ Q4Q7A6
      1. 1y63
        Structural genomics target
        complexed with adp, br, mn, na
        
        chain a [116494]
  19. Hypothetical protein YorR [142211]
    1. Bacillus subtilis [TaxId: 1423] [142212] (2)
      SQ O31896 2-165
      1. 2axp
        
        region a:2-165 [127497]
      2. 2axp
        automatically matched to 2AXP A:2-165
        
        region b:2-165 [127498]
  20. 5' polynucleotide kinase-3' phosphatase, C-terminal domain [142213]
    1. Mouse (Mus musculus) [TaxId: 10090] [142214] (2)
      SQ Q9JLV6 351-522
      1. 1yj5
        complexed with so4
        
        region a:351-522 [123381]
      2. 1yj5
        automatically matched to 1YJ5 A:351-522
        complexed with so4
        
        region b:351-522 [123383]
2. Shikimate kinase (AroK) [52566] (4)
  similar to the nucleotide/nucleoside kinases but acts on different substrate
  1. Shikimate kinase (AroK) [52567]
    1. Escherichia coli [TaxId: 562] [75193] (1)
      1. 1kag
        
        chain a [72249]
        chain b [72250]
    2. Erwinia chrysanthemi [TaxId: 556] [52568] (3)
      1. 1e6c
        complexed with cl, mpd, po4; mutant
        
        chain a [59296]
        chain b [59297]
      2. 1shk
        complexed with mg
        
        chain a [31932]
        chain b [31933]
      3. 2shk
        complexed with adp, mg
        
        chain a [31934]
        chain b [31935]
    3. Mycobacterium tuberculosis [TaxId: 1773] [75194] (24)
      SQ P95014
      1. 2iyv
        automatically matched to d1l4ua_
        complexed with adp, cl
        
        region a:2-166 [137812]
      2. 2iys
        automatically matched to d1l4ua_
        complexed with cl, skm
        
        region a:2-166 [137809]
      3. 2iyx
        automatically matched to d1l4ua_
        complexed with cl, mg, skm, so4
        
        region a:2-166 [137814]
      4. 2iyt
        automatically matched to d1l4ua_
        complexed with cl
        
        region a:2-166 [137810]
      5. 2iyy
        automatically matched to d1l4ua_
        complexed with cl, mg, po4, s3p, so4
        
        region a:2-166 [137815]
      6. 2iyw
        automatically matched to d1l4ua_
        complexed with atp, mg
        
        region a:2-166 [137813]
      7. 2g1k
        automatically matched to d1l4ua_
        complexed with cl, skm, so4
        
        region a:2-166 [134519]
      8. 2iyq
        automatically matched to d1l4ua_
        complexed with adp, cl, skm, trs
        
        region a:2-166 [137806]
      9. 1l4u
        complexed with adp, cl, epe, mg, pt
        
        chain a [73568]
      10. 1l4y
        complexed with adp, cl, mg
        
        chain a [73571]
      11. 2iyr
        automatically matched to d1l4ua_
        complexed with skm
        
        region a:2-166 [137807]
      12. 2iyr
        automatically matched to d1l4ua_
        complexed with skm
        
        region b:2-166 [137808]
      13. 2iyu
        automatically matched to d1l4ua_
        complexed with adp, cl
        
        region a:2-166 [137811]
      14. 2g1j
        automatically matched to d1l4ua_
        complexed with so4
        
        region a:2-166 [134517]
      15. 2g1j
        automatically matched to d1l4ua_
        complexed with so4
        
        region b:2-166 [134518]
      16. 2dfn
        automatically matched to d1l4ua_
        complexed with adp, cl, skm
        
        region a:2-166 [131475]
      17. 2iyz
        automatically matched to d1l4ua_
        complexed with adp, s3p
        
        region a:2-166 [137816]
      18. 1u8a
        complexed with adp, cl, skm
        
        chain a [113115]
      19. 1we2
        automatically matched to d1l4ua_
        complexed with adp, cl, dhk, mg
        
        region a:2-166 [120940]
      20. 1zyu
        automatically matched to d1l4ua_
        complexed with acp, skm
        
        region a:2-166 [125869]
      21. 2dft
        automatically matched to d1l4ua_
        complexed with adp, cl, mg
        
        region a:2-166 [131476]
      22. 2dft
        automatically matched to d1l4ua_
        complexed with adp, cl, mg
        
        region b:2-166 [131477]
      23. 2dft
        automatically matched to d1l4ua_
        complexed with adp, cl, mg
        
        region c:2-166 [131478]
      24. 2dft
        automatically matched to d1l4ua_
        complexed with adp, cl, mg
        
        region d:2-166 [131479]
    4. Campylobacter jejuni [TaxId: 197] [102345] (1)
      1. 1via
        structural genomics
        complexed with so4
        
        chain a [100754]
        chain b [100755]
3. Chloramphenicol phosphotransferase [52569] (1)
  similar to the nucleotide/nucleoside kinases but acts on different substrate
  1. Chloramphenicol phosphotransferase [52570]
    1. Streptomyces venezuelae [TaxId: 54571] [52571] (6)
      1. 1qhx
        complexed with atp, mg
        
        chain a [31936]
      2. 1qhy
        complexed with ags, clm, mg, so4
        
        chain a [31939]
      3. 1qhs
        complexed with clm, so4
        
        chain a [31938]
      4. 1qhn
        complexed with so4
        
        chain a [31937]
      5. 1grq
        complexed with clk, so4
        
        chain a [65506]
      6. 1grr
        complexed with clc, so4
        
        chain a [65507]
4. Gluconate kinase [75195] (1)
  similar to the nucleotide/nucleoside kinases
  1. Gluconate kinase [75196]
    1. Escherichia coli [TaxId: 562] [75197] (6)
      1. 1knq
        complexed with cl
        
        chain a [72786]
        chain b [72787]
      2. 1ko1
        complexed with cl
        
        chain a [72791]
        chain b [72792]
      3. 1ko5
        complexed with atp, mg
        
        chain a [72795]
        chain b [72796]
      4. 1ko4
        complexed with cl, mse
        
        chain a [72793]
        chain b [72794]
      5. 1ko8
        complexed with 6pg, mg
        
        chain a [72801]
        chain b [72802]
      6. 1kof
        complexed with acp, mg
        
        chain a [72803]
        chain b [72804]
5. Plasmid maintenance system epsilon/zeta, toxin zeta subunit [82395] (1)
  similar to the nucleotide/nucleoside kinases; extra N- and C-terminal structures
  1. Plasmid maintenance system epsilon/zeta, toxin zeta subunit [82396]
    1. Streptococcus pyogenes [TaxId: 1314] [82397] (1)
      1. 1gvn
        complexed with so4
        
        chain b [76354]
        chain d [76356]
6. Adenosine-5'phosphosulfate kinase (APS kinase) [52572] (2)
  1. Adenosine-5'phosphosulfate kinase (APS kinase) [52573]
    1. Fungus (Penicillium chrysogenum) [TaxId: 5076] [52574] (3)
      1. 1m7g
        complexed with adp, adx, av2, cry, so4
        
        chain a [78724]
        chain b [78725]
        chain c [78726]
        chain d [78727]
      2. 1m7h
        complexed with adp, adx, so4
        
        chain a [78728]
        chain b [78729]
        chain c [78730]
        chain d [78731]
      3. 1d6j
        
        chain a [31940]
        chain b [31941]
    2. Human (Homo sapiens) [TaxId: 9606] [142215] (6)
      SQ O43252 34-228
      1. 1x6v
        complexed with adp, cl
        
        region a:34-228 [121757]
      2. 1x6v
        automatically matched to 1X6V A:34-228
        complexed with adp, cl
        
        region b:34-228 [121760]
      3. 1xjq
        automatically matched to 1X6V A:34-228
        complexed with adp
        
        region a:34-228 [122037]
      4. 1xjq
        automatically matched to 1X6V A:34-228
        complexed with adp
        
        region b:34-228 [122040]
      5. 1xnj
        automatically matched to 1X6V A:34-228
        complexed with adp, adx
        
        region a:34-228 [122191]
      6. 1xnj
        automatically matched to 1X6V A:34-228
        complexed with adp, adx
        
        region b:34-228 [122194]
7. ATP sulfurylase C-terminal domain [64011] (2)
  1. ATP sulfurylase C-terminal domain [64012]
    1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [64013] (7)
      1. 1g8f
        complexed with acy, ca, cd, mg, na, so4, trs
        
        region a:390-511 [60350]
      2. 1j70
        complexed with na, po4
        
        region a:390-511 [84120]
        region b:390-511 [84123]
        region c:390-511 [84126]
      3. 1jec
        complexed with acy, ca, cd, mg, na, so4, thj
        
        region a:390-511 [66597]
      4. 1g8g
        complexed with acy, adx, ca, cd, mg, na, trs
        
        region a:390-511 [60353]
        region b:390-511 [60356]
      5. 1g8h
        complexed with acy, adx, ca, cd, mg, na, pop
        
        region a:390-511 [60359]
        region b:390-511 [60362]
      6. 1jee
        complexed with acy, adx, ca, cd, lco, mg, na, pop, trs
        
        region a:390-511 [66606]
        region b:390-511 [66609]
      7. 1jed
        complexed with acy, adp, ca, cd, mg, na, trs
        
        region a:390-511 [66600]
        region b:390-511 [66603]
    2. Fungus (Penicillium chrysogenum) [TaxId: 5076] [64014] (2)
      1. 1m8p
        complexed with pps
        
        region a:391-573 [78779]
        region b:391-573 [78782]
        region c:391-573 [78785]
      2. 1i2d
        complexed with adx
        
        region a:391-573 [61558]
        region b:391-573 [61561]
        region c:391-573 [61564]
8. PAPS sulfotransferase [52575] (15)
  Pfam 00685
  similar to the nucleotide/nucleoside kinases but transfer sulphate group
  1. Estrogen sulfotransferase (STE, sult1e1) [52576]
    1. Mouse (Mus musculus) [TaxId: 10090] [52577] (3)
      1. 1aqu
        complexed with a3p, est
        
        chain a [31942]
        chain b [31943]
      2. 1aqy
        complexed with a3p
        
        chain a [31944]
        chain b [31945]
      3. 1bo6
        complexed with a3p, vo4
        
        chain a [31946]
        chain b [31947]
    2. Human (Homo sapiens) [TaxId: 9606] [75198] (2)
      1. 1g3m
        complexed with a3p, edo, pcq
        
        chain a [83268]
        chain b [83269]
      2. 1hy3
        complexed with pps; mutant
        
        chain a [71090]
        chain b [71091]
  2. Hydroxysteroid sulfotransferase sult2a1 [52578]
    1. Human (Homo sapiens) [TaxId: 9606] [52579] (3)
      1. 1j99
        complexed with and, hgi, iod
        
        chain a [71618]
      2. 1efh
        complexed with a3p
        
        chain a [31948]
        chain b [31949]
      3. 1ov4
        complexed with ae2, so4; mutant
        
        chain a [93581]
  3. Aryl sulfotransferase sult1a [102346]
    1. Human (Homo sapiens) [TaxId: 9606] [102347] (3)
      1. 1ls6
        complexed with a3p, npo
        
        chain a [91115]
      2. 2d06
        automatically matched to d1ls6a_
        complexed with a3p, est
        
        region a:8-295 [131061]
      3. 2d06
        automatically matched to d1ls6a_
        complexed with a3p, est
        
        region b:8-295 [131062]
  4. Aryl sulfotransferase sult1a3 [52580]
    1. Human (Homo sapiens) [TaxId: 9606] [52581] (3)
      1. 2a3r
        automatically matched to d1cjma_
        complexed with a3p, ldp
        
        region a:9-293 [126094]
      2. 2a3r
        automatically matched to d1cjma_
        complexed with a3p, ldp
        
        region b:9-293 [126095]
      3. 1cjm
        
        chain a [31950]
  5. Pregnenolone sulfotransferase sult2b1a [102348]
    1. Human (Homo sapiens) [TaxId: 9606] [102349] (1)
      cytosolic enzyme
      1. 1q1q
        complexed with a3p, na, nhe
        
        chain a [95599]
  6. Cholesterol sulfotransferase sult2b1b [102350]
    1. Human (Homo sapiens) [TaxId: 9606] [102351] (3)
      cytosolic enzyme
      1. 1q20
        complexed with a3p, na, plo
        
        chain a [95616]
      2. 1q1z
        complexed with a3p, na
        
        chain a [95615]
      3. 1q22
        complexed with a3p, and, na
        
        chain a [95617]
  7. Putative steroid sulfotransferase rarO47 [102352]
    1. Thale cress (Arabidopsis thaliana) [TaxId: 3702] [102353] (2)
      1. 1q44
        complexed with mla
        
        chain a [95779]
      2. 2q3m
        automatically matched to d1q44a_
        complexed with mla
        
        region a:6-325 [139795]
  8. Heparan sulfate N-deacetylase/N-sulfotransferase domain [52582]
    1. Human (Homo sapiens) [TaxId: 9606] [52583] (1)
      1. 1nst
        complexed with a3p
        
        chain a [31951]
  9. Heparan sulfate 3-O-sulfotransferase [102354]
    1. Mouse (Mus musculus) [TaxId: 10090] [102355] (1)
      SQ O35310 48-311
      1. 1vkj
        complexed with a3p, so4; mutant
        
        chain a [108666]
        chain b [108667]
        chain c [108668]
  10. Retinol dehydratase [64015]
    1. Fall armyworm (Spodoptera frugiperda) [TaxId: 7108] [64016] (2)
      1. 1fmj
        complexed with a3p, ca, hg, rtl
        
        chain a [59879]
        chain b [59880]
      2. 1fml
        complexed with a3p, ca, rtl
        
        chain a [59881]
        chain b [59882]
  11. Stf0 sulfotransferase [110530]
    1. Mycobacterium smegmatis [TaxId: 1772] [110531] (1)
      SQ P84151
      1. 1tex
        complexed with tre
        
        chain a [106818]
        chain b [106819]
        chain c [106820]
        chain d [106821]
  12. Heparan sulfate glucosamine 3-O-sulfotransferase 3 [110532]
    1. Human (Homo sapiens) [TaxId: 9606] [110533] (2)
      SQ Q9Y663 139-406 # isoform 3A1; 100% sequence identity to isoform 3B1 domain (SQ Q9Y662 133-390)
      1. 1t8t
        complexed with a3p, cit
        
        chain a [106685]
        chain b [106686]
      2. 1t8u
        complexed with a3p, ids, na, sgn, so4, uap
        
        chain a [106687]
        chain b [106688]
  13. Thyroid hormone sulfotransferase Sult1b1 [117530]
    1. Human (Homo sapiens) [TaxId: 9606] [117531] (1)
      SQ O43704
      1. 1xv1
        complexed with a3p
        
        chain a [116074]
        chain b [116075]
  14. Sulfotransferase Sult1c2 [159556]
    1. Human (Homo sapiens) [TaxId: 9606] [159557] (2)
      SQ O00338 12-296
      1. 3bfx
        complexed with a3p; mutant
        
        region a:12-296 [155239]
      2. 3bfx
        automatically matched to 3BFX A:12-296
        complexed with a3p; mutant
        
        region b:12-296 [155240]
9. Phosphoribulokinase/pantothenate kinase [52584] (5)
  1. Phosphoribulokinase [52585]
    1. Rhodobacter sphaeroides [TaxId: 1063] [52586] (1)
      1. 1a7j
        complexed with so4
        
        chain a [31952]
  2. Pantothenate kinase PanK [52587]
    has a circularly permuted fold compared to the phosphoribulokinase fold
    1. Escherichia coli [TaxId: 562] [52588] (3)
      SQ P15044
      1. 1sq5
        complexed with adp, pau
        
        chain a [105882]
        chain b [105883]
        chain c [105884]
        chain d [105885]
      2. 1esm
        complexed with coa
        
        chain a [31953]
        chain b [31954]
        chain c [31955]
        chain d [31956]
      3. 1esn
        complexed with anp, mg
        
        chain a [31957]
        chain b [31958]
        chain c [31959]
        chain d [31960]
  3. Hypothetical protein Ygr205W [102356]
    close structural similarity to PanK
    1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [102357] (1)
      1. 1odf
        complexed with gol, so4
        
        chain a [92782]
  4. Hypothetical protein rbstp0775 [102358]
    structural similarity to PanK
    1. Bacillus stearothermophilus [TaxId: 1422] [102359] (1)
      1. 1rz3
        structural genomics
        complexed with act, ca
        
        chain a [98132]
  5. Uridine-cytidine kinase 2 [102360]
    1. Human (Homo sapiens) [TaxId: 9606] [102361] (7)
      1. 1uj2
        complexed with adp, c5p, mg
        
        chain a [99452]
        chain b [99453]
      2. 1xrj
        automatically matched to d1udwb_
        complexed with adp, c5p, mg
        
        region a:20-230 [122256]
      3. 1xrj
        automatically matched to d1udwb_
        complexed with adp, c5p, mg
        
        region b:20-230 [122257]
      4. 1uei
        complexed with utp
        
        chain a [99261]
        chain b [99262]
      5. 1udw
        complexed with ctp
        
        chain a [99226]
        chain b [99227]
      6. 1uej
        complexed with cit, ctn
        
        chain a [99263]
        chain b [99264]
      7. 1ufq
        
        chain a [99350]
        chain b [99351]
        chain c [99352]
        chain d [99353]
10. 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, kinase domain [52589] (2)
  1. 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, kinase domain [52590]
    bifunctional enzyme
    1. Rat (Rattus norvegicus) [TaxId: 10116] [52591] (3)
      1. 1bif
        complexed with atg, gol, mg, po4; mutant
        
        region a:37-249 [31961]
      2. 3bif
        complexed with bog, po4, sin; mutant
        
        region a:37-249 [31962]
      3. 2bif
        complexed with app, bog, f6p, mg, po4, sux; mutant
        
        region a:37-249 [31963]
        region b:37-249 [31964]
    2. Human (Homo sapiens) [TaxId: 9606] [82398] (1)
      1. 1k6m
        complexed with atg, po4; mutant
        
        region a:39-251 [77275]
        region b:39-251 [77277]
11. G proteins [52592] (118)
  core: mixed beta-sheet of 6 strands, order 231456; strand 2 is antiparallel to the rest
  1. cH-p21 Ras protein [52593]
    1. Human (Homo sapiens) [TaxId: 9606] [52594] (57)
      SQ Q6P716
      1. 1ctq
        
        chain a [31965]
      2. 1zw6
        automatically matched to 1ZVQ A:1-166
        complexed with ca, gnp, mg; mutant
        
        region a:1-166 [125737]
      3. 2rge
        automatically matched to d1aa9a_
        complexed with ca, gnp, mg
        
        region a:1-166 [152011]
      4. 5p21
        complexed with gnp, mg
        
        chain a [31966]
      5. 1lf0
        complexed with ca, gnp, mg; mutant
        
        chain a [77913]
      6. 1qra
        
        chain a [31967]
      7. 121p
        complexed with gto, mg
        
        chain a [31968]
      8. 821p
        complexed with gtn, mg; mutant
        
        chain a [31969]
      9. 1lf5
        complexed with gdp, mg; mutant
        
        chain a [77917]
      10. 1clu
        complexed with dbg, mg; mutant
        
        chain a [31970]
      11. 1xj0
        automatically matched to 1XCM A:1-166
        complexed with gdp, mg; mutant
        
        region a:1-166 [122024]
      12. 1xcm
        complexed with gnp, mg; mutant
        
        region a:1-166 [121855]
      13. 2rgd
        automatically matched to d721pa_
        complexed with ca, gnp, mg; mutant
        
        region a:1-166 [152010]
      14. 1p2t
        complexed with gnp, mg
        
        chain a [93958]
      15. 2c5l
        automatically matched to d2q21__
        complexed with gol, gtp, mg; mutant
        
        region a:1-166 [129922]
      16. 2c5l
        automatically matched to d2q21__
        complexed with gol, gtp, mg; mutant
        
        region b:1-166 [129923]
      17. 1p2u
        complexed with gnp, ioh, mg
        
        chain a [93959]
      18. 1zvq
        complexed with gdp, mg; mutant
        
        region a:1-166 [125722]
      19. 1jah
        complexed with gcp, mg; mutant
        
        chain a [31972]
      20. 1jai
        complexed with gcp, mn; mutant
        
        chain a [31971]
      21. 1rvd
        complexed with dbg, mg; mutant
        
        chain a [31974]
      22. 1nvu
        complexed with gtp, mg, po4; mutant
        
        chain q [86274]
        chain r [86275]
      23. 1lfd
        complexed with gnp, mg; mutant
        
        chain b [31976]
        chain d [31977]
      24. 1ioz
        complexed with gdp
        
        chain a [66245]
      25. 1nvv
        complexed with gnp, mg, po4; mutant
        
        chain q [86277]
        chain r [86278]
      26. 2uzi
        automatically matched to d2q21a_
        complexed with gtp, mg, zn; mutant
        
        region r:1-166 [152348]
      27. 721p
        complexed with gtn, mg; mutant
        
        chain a [31975]
      28. 1gnr
        complexed with cag, mg
        
        chain a [31973]
      29. 1p2v
        complexed with gnp, hez, mg
        
        chain a [93960]
      30. 4q21
        complexed with gdp, mg
        
        chain a [31978]
      31. 1p2s
        complexed with etf, gnp, mg
        
        chain a [93957]
      32. 6q21
        complexed with gcp, mg
        
        chain a [31979]
        chain b [31980]
        chain c [31981]
        chain d [31982]
      33. 1agp
        complexed with gnp, mg; mutant
        
        chain a [31985]
      34. 421p
        complexed with gtn, mg; mutant
        
        chain a [31983]
      35. 1q21
        complexed with gdp, mg
        
        chain a [31984]
      36. 1xd2
        complexed with gdp, mg, po4; mutant
        
        chain a [115142]
        chain b [115143]
      37. 221p
        complexed with gtn, mg; mutant
        
        chain a [31987]
      38. 2q21
        complexed with gdp, mg; mutant
        
        chain a [31986]
      39. 1nvw
        complexed with gnp, mg, po4
        
        chain q [86280]
        chain r [86281]
      40. 621p
        complexed with gtn, mg; mutant
        
        chain a [31988]
      41. 1bkd
        
        chain r [31993]
      42. 2vh5
        automatically matched to d2q21a_
        complexed with gtp, mg, zn; mutant
        
        region r:1-166 [153047]
      43. 1wq1
        complexed with af3, gdp, mg
        
        chain r [31991]
      44. 1gnp
        complexed with agn, mg
        
        chain a [31990]
      45. 1gnq
        complexed with cag, mg
        
        chain a [31989]
      46. 1he8
        complexed with gnp, mg; mutant
        
        chain b [31995]
      47. 1nvx
        complexed with gtp, mg, po4; mutant
        
        chain q [86283]
        chain r [86284]
      48. 521p
        complexed with gtp, mg; mutant
        
        chain a [31992]
      49. 1iaq
        complexed with gnp, mg; mutant
        
        chain a [62120]
        chain b [62121]
        chain c [62122]
      50. 1k8r
        complex with bry2 RBD
        complexed with gnp, mg
        
        chain a [72179]
      51. 1plj
        complexed with cag, mg; mutant
        
        chain a [31994]
      52. 1plk
        complexed with gtp, mg; mutant
        
        chain a [31996]
      53. 1pll
        complexed with gdp; mutant
        
        chain a [31997]
      54. 1crr
        complexed with gdp, mg
        
        chain a [31998]
      55. 1crp
        complexed with gdp, mg
        
        chain a [32000]
      56. 1crq
        complexed with gdp, mg
        
        chain a [31999]
      57. 1aa9
        complexed with gdp, mg
        
        chain a [32001]
  2. Rac [52595]
    1. Human (Homo sapiens) [TaxId: 9606] [52596] (23)
      1. 1mh1
        rac1
        complexed with gnp, mg; mutant
        
        chain a [32002]
      2. 2vrw
        automatically matched to d1foeb_
        complexed with zn
        
        region a:1-177 [153524]
      3. 1ryh
        alternative splicing variant of rac1
        complexed with gnp, mg
        
        chain a [98102]
        chain b [98103]
      4. 1ryf
        alternative splicing variant of rac1
        complexed with gdp, mg
        
        chain a [98099]
        chain b [98100]
      5. 1he1
        rac1 in complex with the GAP domain of ExoS
        complexed with af3, gdp, mg, ni
        
        chain c [32003]
        chain d [32004]
      6. 2p2l
        automatically matched to d1hh4a_
        complexed with gdp, zn
        
        region a:2-178 [139465]
      7. 2p2l
        automatically matched to d1hh4a_
        complexed with gdp, zn
        
        region b:2-178 [139466]
      8. 2p2l
        automatically matched to d1hh4a_
        complexed with gdp, zn
        
        region c:2-178 [139467]
      9. 2fju
        automatically matched to d1foeb_
        complexed with ca, gsp, mg
        
        region a:1-177 [133622]
      10. 2nz8
        automatically matched to d1foeb_
        
        region a:1-177 [138837]
      11. 1ds6
        rac2 in complex with RhoGDI (chain A)
        complexed with gdp, mg
        
        chain a [32006]
      12. 1g4u
        rac1 in complex with the GAP domain of SptP
        complexed with af3, gdp, mg; mutant
        
        chain r [32005]
      13. 1e96
        rac1
        complexed with gtp, mg; mutant
        
        chain a [32007]
      14. 1i4d
        rac1 in complex with arfaptin
        complexed with gdp, mg
        
        chain d [61684]
      15. 2h7v
        automatically matched to d1hh4a_
        complexed with gdp, mg; mutant
        
        region a:2-178 [136223]
      16. 2h7v
        automatically matched to d1hh4a_
        complexed with gdp, mg; mutant
        
        region b:2-178 [136224]
      17. 1foe
        complexed with so4; mutant
        
        chain b [32008]
        chain d [32009]
        chain f [32010]
        chain h [32011]
      18. 3bji
        automatically matched to d1foeb_
        complexed with zn
        
        region c:1-177 [155330]
      19. 3bji
        automatically matched to d1foeb_
        complexed with zn
        
        region d:3-176 [155331]
      20. 1i4t
        rac1 in complex with arfaptin
        complexed with gnp, mg; mutant
        
        chain d [61731]
      21. 1i4l
        rac1 in complex with arfaptin
        complexed with gdp, mg
        
        chain d [61720]
      22. 1hh4
        rac1 in complex with RhoGD
        complexed with gdp, ger, mg
        
        chain a [61037]
        chain b [61038]
      23. 2rmk
        automatically matched to d1e96a_
        complexed with gcp, mg; mutant
        
        region a:2-178 [152166]
  3. Ras-related protein RalA [89662]
    1. Human (Homo sapiens) [TaxId: 9606] [89663] (7)
      1. 2a9k
        automatically matched to d1uada_
        complexed with gdp, mg, nad
        
        region a:13-182 [126442]
      2. 2a78
        automatically matched to d1uada_
        complexed with gdp, mg
        
        region a:13-182 [126329]
      3. 1zc3
        complexed with gnp, mg; mutant
        
        region a:11-183 [124880]
      4. 1zc3
        automatically matched to 1ZC3 A:11-183
        complexed with gnp, mg; mutant
        
        region c:11-183 [124882]
      5. 1uad
        complexed with the Sec5 domain Ral-binding domain
        complexed with gnp, mg
        
        chain a [88377]
        chain b [88378]
      6. 1zc4
        automatically matched to 1ZC3 A:11-183
        complexed with gnp, mg; mutant
        
        region a:11-183 [124884]
      7. 1zc4
        automatically matched to 1ZC3 A:11-183
        complexed with gnp, mg; mutant
        
        region c:11-183 [124886]
    2. Cotton-top tamarin (Saguinus oedipus) [TaxId: 9490] [117532] (3)
      SQ P63320 # 100% identical to the mouse and rat orthologs (SQ P63321 P63322)
      1. 1u8z
        complexed with gdp, mg
        
        chain a [113212]
        chain b [113213]
      2. 1u8y
        complexed with gnp, mg
        
        chain a [113210]
        chain b [113211]
      3. 1u90
        complexed with gdp, mg
        
        chain a [113214]
        chain b [113215]
  4. Rap1A [52597]
    1. Human (Homo sapiens) [TaxId: 9606] [52598] (2)
      1. 1c1y
        complexed with ca, gtp, mg
        
        chain a [32012]
      2. 1gua
        complexed with ca, gnp, mg; mutant
        
        chain a [32013]
  5. Rap2a [52599]
    1. Human (Homo sapiens) [TaxId: 9606] [52600] (3)
      1. 1kao
        complexed with gdp, mg
        
        chain a [32014]
      2. 3rap
        
        chain r [32015]
        chain s [32016]
      3. 2rap
        complexed with gtp, mg; mutant
        
        chain a [32017]
  6. Rab3a [52601]
    1. Rat (Rattus norvegicus) [TaxId: 10116] [52602] (2)
      1. 3rab
        complexed with gnp, mg
        
        chain a [32018]
      2. 1zbd
        complexed with gtp, mg, zn; mutant
        
        chain a [32019]
  7. Rab5a [82399]
    1. Human (Homo sapiens) [TaxId: 9606] [82400] (11)
      SQ P20339 18-182
      1. 1r2q
        complexed with gnp, gol, mg
        
        chain a [96874]
      2. 1n6h
        complexed with bme, gnp, mg
        
        chain a [80197]
      3. 1n6p
        complexed with gnp, mg; mutant
        
        chain a [80203]
      4. 1n6r
        complexed with bme, gnp, mg; mutant
        
        chain a [80211]
      5. 1n6k
        complexed with af3, bme, gdp, mg; mutant
        
        chain a [80199]
      6. 1n6n
        complexed with bme, gnp, mg; mutant
        
        chain a [80201]
      7. 1n6l
        complexed with bme, gtp, mg; mutant
        
        chain a [80200]
      8. 1n6i
        complexed with bme, gdp, mg; mutant
        
        chain a [80198]
      9. 1n6o
        complexed with bme, gnp, mg; mutant
        
        chain a [80202]
      10. 1tu4
        complexed with co, gdp, so4
        
        chain a [112649]
        chain b [112650]
        chain c [112651]
        chain d [112652]
      11. 1tu3
        complexed with gnp, mg
        
        chain a [112639]
        chain b [112640]
        chain c [112641]
        chain d [112642]
        chain e [112643]
  8. Rab5c [52603]
    1. Mouse (Mus musculus) [TaxId: 10090] [52604] (4)
      1. 1z07
        complexed with gnp, mg; mutant
        
        region a:19-182 [124302]
      2. 1huq
        complexed with gnp, mg
        
        chain a [32020]
      3. 1z0d
        complexed with gdp, mg, po4; mutant
        
        region a:19-183 [124311]
      4. 1z0d
        automatically matched to 1Z0D A:19-183
        complexed with gdp, mg, po4; mutant
        
        region c:19-183 [124312]
  9. Rab6 [52605]
    1. Malaria parasite (Plasmodium falciparum) [TaxId: 5833] [52606] (1)
      1. 1d5c
        complexed with gdp, mg
        
        chain a [32021]
    2. Human (Homo sapiens) [TaxId: 9606] [142216] (1)
      SQ P20340 13-176
      1. 1yzq
        complexed with gnp, mg
        
        region a:14-177 [124286]
  10. Rab11a [102362]
    1. Human (Homo sapiens) [TaxId: 9606] [102363] (13)
      1. 2d7c
        automatically matched to d1oiwa_
        complexed with gtp, mes, mg; mutant
        
        region a:8-173 [131317]
      2. 2d7c
        automatically matched to d1oiwa_
        complexed with gtp, mes, mg; mutant
        
        region b:8-173 [131318]
      3. 1oix
        automatically matched to d1oiwa_
        complexed with cl, gdp, mg, po4; mutant
        
        region a:8-173 [118710]
      4. 2hv8
        automatically matched to d1oiwa_
        complexed with 2me, gtp, mes, mg, so4; mutant
        
        region a:8-173 [136794]
      5. 2hv8
        automatically matched to d1oiwa_
        complexed with 2me, gtp, mes, mg, so4; mutant
        
        region b:8-173 [136795]
      6. 2hv8
        automatically matched to d1oiwa_
        complexed with 2me, gtp, mes, mg, so4; mutant
        
        region c:8-173 [136796]
      7. 1yzk
        automatically matched to d1oiva_
        complexed with gnp, mg
        
        region a:8-173 [124281]
      8. 1oiv
        complexed with edo, gdp, so4; mutant
        
        chain a [93076]
        chain b [93077]
      9. 1yzn
        automatically matched to d1oiva_
        complexed with gnp, mg
        
        region a:4-169 [124284]
      10. 1oiw
        complexed with gsp, mg; mutant
        
        chain a [93078]
      11. 2gzh
        automatically matched to d1oiwa_
        complexed with gtp, mg, po4; mutant
        
        region a:8-173 [135905]
      12. 2gzd
        automatically matched to d1oiwa_
        complexed with gtp, mg; mutant
        
        region a:8-173 [135901]
      13. 2gzd
        automatically matched to d1oiwa_
        complexed with gtp, mg; mutant
        
        region b:8-173 [135902]
    2. Saccharomyces cerevisiae [TaxId: 4932] [159558] (4)
      1. 3cue
        automatically matched to d1yzna1
        complexed with plm
        
        region f:4-169 [156989]
      2. 3cue
        automatically matched to d1yzna1
        complexed with plm
        
        region l:4-169 [156990]
      3. 3cue
        automatically matched to d1yzna1
        complexed with plm
        
        region r:4-169 [156991]
      4. 3cue
        automatically matched to d1yzna1
        complexed with plm
        
        region x:4-169 [156992]
  11. Rab-related protein Sec4 [52607]
    1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [52608] (5)
      1. 1g16
        complexed with co, gdp
        
        chain a [32022]
        chain b [32023]
        chain c [32024]
        chain d [32025]
      2. 1g17
        complexed with gtn, mg
        
        chain a [32026]
        chain b [32027]
      3. 3cph
        automatically matched to d2ocyc1
        complexed with gdp, mg
        
        region a:20-186 [156886]
      4. 2eqb
        automatically matched to 2OCY C:18-186
        complexed with po4
        
        region a:19-186 [132286]
      5. 2ocy
        
        region c:18-186 [139023]
  12. Rab-related protein ypt7p [75199]
    1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [75200] (2)
      1. 1ky3
        complexed with gdp, mg
        
        chain a [73193]
      2. 1ky2
        complexed with gnp, mg
        
        chain a [73192]
  13. Ran [52609]
    1. Dog (Canis familiaris) [TaxId: 9615] [52610] (6)
      SQ P62825
      1. 1wa5
        complexed with gtp, mg
        
        chain a [114431]
      2. 1byu
        complexed with gdp, mg
        
        chain a [32032]
        chain b [32033]
      3. 3ran
        complexed with gdp, mg; mutant
        
        chain a [32028]
        chain b [32029]
        chain c [32030]
        chain d [32031]
      4. 1qg2
        complexed with gdp, mo4; mutant
        
        chain a [32034]
      5. 1qg4
        complexed with gdp, mo4; mutant
        
        chain a [32035]
        chain b [32036]
      6. 1a2k
        complexed with gdp, mg, so4
        
        chain c [32037]
        chain d [32038]
        chain e [32039]
    2. Human (Homo sapiens) [TaxId: 9606] [52611] (7)
      1. 1i2m
        complexed to RCC1
        complexed with so4
        
        chain a [61568]
        chain c [61570]
      2. 3ch5
        automatically matched to d1k5da_
        complexed with gdp, mg, so4, zn
        
        region a:8-205 [156620]
      3. 1ibr
        complexed with gnp, mg
        
        chain a [32040]
        chain c [32041]
      4. 1k5d
        complexed with gnp, mg; mutant
        
        chain a [68168]
        chain d [68171]
        chain g [68174]
        chain j [68177]
      5. 1rrp
        complexed with gnp, mg
        
        chain a [32042]
        chain c [32043]
      6. 1k5g
        complexed with af3, gdp, mg; mutant
        
        chain a [68180]
        chain d [68183]
        chain g [68186]
        chain j [68189]
      7. 1qbk
        complexed with gnp, mg
        
        chain c [32044]
  14. RhoA [52612]
    1. Human (Homo sapiens) [TaxId: 9606] [52613] (14)
      SQ P61586 2-181
      1. 1kmq
        complexed with dox, gnp, mg; mutant
        
        chain a [84412]
      2. 1tx4
        complexed with alf, gdp, mg
        
        chain b [32045]
      3. 1ow3
        complexed with gdp, mg, mgf
        
        chain b [87486]
      4. 1dpf
        complexed with gdp; mutant
        
        chain a [32046]
      5. 1cxz
        complexed with gsp, mg; mutant
        
        chain a [32048]
      6. 1a2b
        complexed with gsp, mg; mutant
        
        chain a [32049]
      7. 1ftn
        complexed with gdp, mg; mutant
        
        chain a [32047]
      8. 1s1c
        complexed with gtn, mg
        
        chain a [98340]
        chain b [98341]
      9. 1lb1
        mutant
        
        chain b [73786]
        chain d [73789]
        chain f [73792]
        chain h [73795]
      10. 1xcg
        mutant
        
        chain b [115122]
        chain f [115125]
      11. 1x86
        complexed with po4; mutant
        
        chain b [109506]
        chain d [109509]
        chain f [109512]
        chain h [109515]
      12. 2rgn
        automatically matched to d1x86b_
        complexed with alf, gdp, mg
        
        region c:4-180 [152014]
      13. 2rgn
        automatically matched to d1x86b_
        complexed with alf, gdp, mg
        
        region f:5-180 [152017]
      14. 1cc0
        
        chain a [32050]
        chain c [32051]
  15. RhoE (RND3) [75201]
    1. Mouse (Mus musculus) [TaxId: 10090] [75202] (2)
      1. 1m7b
        complexed with gtp, mg
        
        chain a [74572]
      2. 1gwn
        complexed with gtp, mo2
        
        chain a [70672]
        chain c [70673]
  16. ADP-ribosylation factor [52614]
    1. Human (Homo sapiens), ARF1 [TaxId: 9606] [52615] (14)
      SQ P32889
      1. 1r8s
        complexed with a sec7 domain
        complexed with bme, fmt, gdp, so3, so4; mutant
        
        chain a [97247]
      2. 1o3y
        complexed with gtp, mg; mutant
        
        chain a [86618]
        chain b [86619]
      3. 1j2j
        complexed with gtp, iod, mg; mutant
        
        chain a [84016]
      4. 1s9d
        complexed with a sec7 domain
        complexed with afb, gdp, mg; mutant
        
        chain a [98750]
      5. 1r8q
        complexed with a sec7 domain
        complexed with afb, g3d, mg, zn; mutant
        
        chain a [97243]
        chain b [97244]
      6. 2j59
        automatically matched to d1o3ya_
        complexed with dio, edo, gtp, mg, so4; mutant
        
        region a:16-180 [138029]
      7. 2j59
        automatically matched to d1o3ya_
        complexed with dio, edo, gtp, mg, so4; mutant
        
        region b:16-180 [138030]
      8. 2j59
        automatically matched to d1o3ya_
        complexed with dio, edo, gtp, mg, so4; mutant
        
        region c:16-180 [138031]
      9. 2j59
        automatically matched to d1o3ya_
        complexed with dio, edo, gtp, mg, so4; mutant
        
        region d:16-180 [138032]
      10. 2j59
        automatically matched to d1o3ya_
        complexed with dio, edo, gtp, mg, so4; mutant
        
        region e:16-180 [138033]
      11. 2j59
        automatically matched to d1o3ya_
        complexed with dio, edo, gtp, mg, so4; mutant
        
        region f:16-180 [138034]
      12. 1re0
        complexed with a sec7 domain
        complexed with afb, cit, gdp, mg
        
        chain a [97317]
      13. 1hur
        complexed with gdp, mg
        
        chain a [32052]
        chain b [32053]
      14. 1u81
        complexed with gdp, mg
        
        chain a [113113]
    2. Rat (Rattus norvegicus), ARF1 [TaxId: 10116] [52616] (2)
      1. 1rrg
        complexed with gdp, mg
        
        chain a [32054]
        chain b [32055]
      2. 1rrf
        complexed with gdp, mg
        
        chain a [32056]
    3. Human (Homo sapiens), ARF6 [TaxId: 9606] [52617] (6)
      1. 2a5d
        automatically matched to d1e0sa_
        complexed with gol, gtp, mg, na; mutant
        
        region a:12-174 [126172]
      2. 2a5f
        automatically matched to d1e0sa_
        complexed with gol, gtp, mg, na, nad; mutant
        
        region a:12-173 [126173]
      3. 1e0s
        complexed with dtt, gdp, nh4
        
        chain a [32057]
      4. 2a5g
        complexed with gtp, mg, na; mutant
        
        region a:12-173 [126174]
      5. 2j5x
        automatically matched to d1e0sa_
        complexed with gsp, mg
        
        region a:11-174 [138072]
      6. 2j5x
        automatically matched to d1e0sa_
        complexed with gsp, mg
        
        region b:11-174 [138073]
    4. Mouse (Mus musculus), ARL3 [TaxId: 10090] [52618] (2)
      1. 1fzq
        complexed with gdp, mes, nh4, so4
        
        chain a [32060]
      2. 3bh7
        automatically matched to d1fzqa_
        complexed with alf, gdp, mg
        
        region a:17-177 [155255]
    5. Mouse (Mus musculus), ARL2 [TaxId: 10090] [75203] (3)
      1. 1ksh
        complexed with GMP-PDE delta
        complexed with cme, gdp, mg, po4; mutant
        
        chain a [72914]
      2. 1ksg
        complexed with GMP-PDE delta
        complexed with gtp, mg; mutant
        
        chain a [72912]
      3. 1ksj
        complexed with GMP-PDE delta
        complexed with bme, cme, gdp, gtp, mg, mse, po4; mutant
        
        chain a [72916]
    6. Baker's yeast (Saccharomyces cerevisiae), ARF2 [TaxId: 4932] [82401] (1)
      1. 1mr3
        complexed with cry, egl, eoh, g3d, mg, pdo
        
        chain f [79422]
    7. Baker's yeast (Saccharomyces cerevisiae), ARL1 [TaxId: 4932] [82402] (1)
      1. 1moz
        complexed with gdp
        
        chain a [79368]
        chain b [79369]
    8. Human (Homo sapiens), ARL1 [TaxId: 9606] [102364] (2)
      1. 1upt
        complexed with gtp, mg
        
        chain a [99767]
        chain c [99769]
        chain e [99771]
        chain g [99773]
      2. 1r4a
        complexed with gnp, mg
        
        chain a [96986]
        chain b [96987]
        chain c [96988]
        chain d [96989]
    9. Human (Homo sapiens), ARF4 [TaxId: 9606] [142217] (2)
      SQ P18085 3-177
      1. 1z6x
        complexed with gdp, mg
        
        region a:4-178 [124571]
      2. 1z6x
        automatically matched to 1Z6X A:4-178
        complexed with gdp, mg
        
        region b:4-178 [124572]
    10. Human (Homo sapiens), ARL5A [TaxId: 9606] [142218] (3)
      SQ Q9Y689 2-178
      1. 1zj6
        complexed with g3d, so4
        
        region a:2-178 [125145]
      2. 1z6y
        automatically matched to 1ZJ6 A:2-178
        complexed with gdp
        
        region a:3-175 [124573]
      3. 1z6y
        automatically matched to 1ZJ6 A:2-178
        complexed with gdp
        
        region b:3-175 [124574]
    11. Human (Homo sapiens), ARL8A [TaxId: 9606] [142219] (1)
      SQ Q96BM9 18-181
      1. 1zd9
        complexed with gdp, mg
        
        region a:18-181 [124938]
    12. Human (Homo sapiens) [TaxId: 9606] [142220] (1)
      SQ P84085 6-179
      1. 2b6h
        complexed with cl, gdp, so4, unx
        
        region a:7-180 [127994]
    13. Human (Homo sapiens), ARL5B [TaxId: 9606] [142221] (1)
      SQ Q96KC2 6-173
      1. 1yzg
        complexed with gdp
        
        region a:6-173 [124276]
    14. Human(Homo sapiens), ARL8B [TaxId: 9606] [142222] (1)
      SQ Q9NVJ2 18-182
      1. 2al7
        complexed with gdp, mg
        
        region a:17-181 [126972]
  17. SAR1 [69483]
    1. Chinese hamster (Cricetulus griseus) [TaxId: 10029] [69484] (3)
      1. 1f6b
        complexed with gdp, mg, so4
        
        chain a [64986]
        chain b [64987]
      2. 2fmx
        automatically matched to d1f6ba_
        complexed with gdp, mg, so4
        
        region a:13-198 [133796]
      3. 2fmx
        automatically matched to d1f6ba_
        complexed with gdp, mg, so4
        
        region b:13-198 [133797]
    2. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [82403] (2)
      1. 2qtv
        automatically matched to d1m2ob_
        complexed with gnp, mg, zn
        
        region b:24-189 [151362]
      2. 1m2o
        complexed with sec23
        complexed with gnp, mg, zn
        
        chain b [78485]
        chain d [78491]
    3. Human (Homo sapiens) [TaxId: 9606] [142223] (2)
      SQ Q9NR31 13-198
      1. 2gao
        complexed with gdp, unx
        
        region a:13-198 [134891]
      2. 2gao
        automatically matched to 2GAO A:13-198
        complexed with gdp, unx
        
        region b:14-198 [134892]
  18. CDC42 [52619]
    1. Human (Homo sapiens) [TaxId: 9606] [52620] (21)
      1. 2ngr
        complexed with gdp, mg; mutant
        
        chain a [32061]
      2. 1grn
        complexed with gdp, mg
        
        chain a [32062]
      3. 2dfk
        automatically matched to d1aje__
        complexed with gol, so4
        
        region b:1-187 [131473]
      4. 2dfk
        automatically matched to d1aje__
        complexed with gol, so4
        
        region d:1-187 [131474]
      5. 1nf3
        complexed with gnp, mg; mutant
        
        chain a [85594]
        chain b [85595]
      6. 1kz7
        complexed with mse; mutant
        
        chain b [73335]
        chain d [73338]
      7. 1ki1
        complexed with so4; mutant
        
        chain a [72496]
        chain c [72499]
      8. 1gzs
        complexed with so4
        
        chain a [76424]
        chain c [76426]
      9. 1kzg
        mutant
        
        chain b [73357]
        chain d [73360]
      10. 2qrz
        automatically matched to d1ajea_
        complexed with gcp, mg, so4
        
        region a:1-187 [151309]
      11. 2qrz
        automatically matched to d1ajea_
        complexed with gcp, mg, so4
        
        region b:1-187 [151310]
      12. 1doa
        
        chain a [32065]
      13. 1a4r
        complexed with gdp, gnp, mg; mutant
        
        chain a [32063]
        chain b [32064]
      14. 1an0
        complexed with gdp, mg
        
        chain a [32066]
        chain b [32067]
      15. 1am4
        complexed with gnp, mg; mutant
        
        chain d [32068]
        chain e [32069]
        chain f [32070]
      16. 2ase
        mutant
        
        region a:1-178 [127252]
      17. 1cee
        complexed with gcp, mg
        
        chain a [32072]
      18. 1ees
        
        chain a [32073]
      19. 1aje
        
        chain a [32071]
      20. 1cf4
        complexed with gnp, mg; mutant
        
        chain a [32075]
      21. 1e0a
        complexed with gnp, mg; mutant
        
        chain a [32074]
    2. Mus musculus [TaxId: 10090] [159559] (2)
      1. 3eg5
        automatically matched to d1am4d_
        complexed with gnp, mg; mutant
        
        region a:2-177 [158146]
      2. 3eg5
        automatically matched to d1am4d_
        complexed with gnp, mg; mutant
        
        region c:2-177 [158147]
  19. Ypt51 [52621]
    1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [52622] (1)
      1. 1ek0
        complexed with gdp, gnp, mg, mho, ni
        
        chain a [32076]
  20. Chloroplast protein translocon GTPase Toc34 [69485]
    1. Garden pea (Pisum sativum) [TaxId: 3888] [69486] (1)
      1. 1h65
        complexed with gdp, mg
        
        chain a [65640]
        chain b [65641]
        chain c [65642]
  21. Signal recognition particle receptor beta-subunit [89664]
    1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [89665] (1)
      1. 1nrj
        complexed with edo, gtp, mg
        
        chain b [86125]
    2. Mouse (Mus musculus) [TaxId: 10090] [142224] (2)
      SQ P47758 63-269
      1. 2fh5
        complexed with gtp, mg
        
        region b:63-269 [133478]
      2. 2go5
        automatically matched to 2FH5 B:63-269
        
        region 2:63-269 [135431]
  22. Transducin (alpha subunit) [52623]
    common fold is interrupted with an all-alpha domain
    1. Cow (Bos taurus) [TaxId: 9913] [52624] (15)
      SQ P04896 39-388
      1. 1tad
        complexed with alf, ca, cac, gdp
        
        region a:27-56,a:178-342 [32077]
        region b:27-56,b:178-342 [32078]
        region c:27-56,c:178-344 [32079]
      2. 1tag
        complexed with gdp, mg
        
        region a:27-56,a:178-340 [32080]
      3. 1azt
        complexed with gsp, mg, po4; mutant
        
        region a:35-65,a:202-391 [32084]
        region b:35-69,b:202-391 [32085]
      4. 1azs
        complexed with fkp, gsp, mg; mutant
        
        region c:36-66,c:202-393 [32086]
      5. 1cul
        complexed with 103, 3po, cl, fok, gsp, mes, mg; mutant
        
        region c:39-65,c:202-386 [32087]
      6. 1tnd
        complexed with cac, gsp, mg
        
        region a:27-56,a:178-349 [32081]
        region b:27-56,b:178-342 [32082]
        region c:27-56,c:178-342 [32083]
      7. 1cs4
        complexed with 101, cl, fok, gsp, mes, mg, pop; mutant
        
        region c:39-65,c:202-388 [32088]
      8. 1cjt
        complexed with cl, dad, fok, gsp, mes, mg, mn; mutant
        
        region c:39-65,c:202-388 [32089]
      9. 1cju
        complexed with cl, dad, fok, gsp, mg; mutant
        
        region c:39-66,c:202-388 [32090]
      10. 1cjk
        complexed with ags, cl, fok, gsp, mes, mg, mn; mutant
        
        region c:39-65,c:202-388 [32092]
      11. 1cjv
        complexed with cl, dad, fok, gsp, mes, mg, zn; mutant
        
        region c:39-65,c:202-388 [32091]
      12. 2gvd
        automatically matched to d1azsc2
        complexed with 128, cl, fkp, gsp, mn
        
        region c:39-65,c:202-382 [135774]
      13. 1tl7
        complexed with cl, fok, gsp, mg, mn, onm
        
        region c:39-65,c:202-388 [112504]
      14. 1u0h
        complexed with cl, fok, gsp, mg, onm
        
        region c:39-65,c:202-388 [112919]
      15. 2gvz
        automatically matched to d1azsc2
        complexed with cl, fkp, gsp, mn, ona
        
        region c:39-65,c:202-382 [135800]
    2. Rat (Rattus norvegicus) [TaxId: 10116] [52625] (33)
      SQ P10824
      1. 1svs
        complexed with gnp, mg; mutant
        
        region a:32-60,a:182-347 [106051]
      2. 1cip
        complexed with gnp, mg
        
        region a:32-60,a:182-347 [32093]
      3. 1gia
        complexed with gsp, mg
        
        region a:34-60,a:182-343 [32094]
      4. 1svk
        complexed with alf, gdp, mg; mutant
        
        region a:33-60,a:182-345 [106050]
      5. 1as0
        complexed with gsp, mg, so4; mutant
        
        region a:32-60,a:182-344 [32095]
      6. 1bh2
        complexed with gsp, mg; mutant
        
        region a:32-60,a:182-346 [32097]
      7. 1bof
        complexed with gdp, mg, so4
        
        region a:10-60,a:182-354 [32100]
      8. 1gfi
        complexed with alf, gdp, mg
        
        region a:33-60,a:182-345 [32102]
      9. 1gdd
        complexed with gdp, so4
        
        region a:9-60,a:182-354 [32101]
      10. 1gil
        complexed with gsp, mg; mutant
        
        region a:34-60,a:182-343 [32106]
      11. 1git
        complexed with gdp, po4; mutant
        
        region a:32-60,a:182-348 [32105]
      12. 1as3
        complexed with gdp, so4; mutant
        
        region a:9-60,a:182-354 [32107]
      13. 1y3a
        automatically matched to d1kjya2
        complexed with gdp
        
        region a:34-60,a:182-345 [122583]
      14. 1y3a
        automatically matched to d1kjya2
        complexed with gdp
        
        region b:34-60,b:182-344 [122585]
      15. 1y3a
        automatically matched to d1kjya2
        complexed with gdp
        
        region c:34-60,c:182-344 [122587]
      16. 1y3a
        automatically matched to d1kjya2
        complexed with gdp
        
        region d:34-60,d:182-344 [122589]
      17. 2gtp
        automatically matched to d1kjya2
        complexed with alf, gdp, mg
        
        region a:32-60,a:182-348 [135679]
      18. 2gtp
        automatically matched to d1kjya2
        complexed with alf, gdp, mg
        
        region b:32-60,b:182-348 [135681]
      19. 2hlb
        automatically matched to d1agra2
        complexed with gdp, so4
        
        region a:9-60,a:182-354 [136564]
      20. 1as2
        complexed with gdp, po4; mutant
        
        region a:32-60,a:182-346 [32110]
      21. 1gg2
        complexed with gdp; mutant
        
        region a:5-60,a:182-348 [32109]
      22. 1gp2
        complexed with gdp; mutant
        
        region a:5-60,a:182-348 [32108]
      23. 1agr
        complexed with alf, cit, gdp, mg
        
        region a:5-60,a:182-354 [32111]
        region d:11-60,d:182-354 [32112]
      24. 2ik8
        automatically matched to d1kjya2
        complexed with alf, gdp, mg, so4
        
        region a:32-60,a:182-348 [137485]
      25. 2ik8
        automatically matched to d1kjya2
        complexed with alf, gdp, mg, so4
        
        region c:33-60,c:182-348 [137487]
      26. 1kjy
        bound to the goloco motif of rgs14, chains B and D
        complexed with cs, gdp, mg
        
        region a:30-60,a:182-349 [72625]
        region c:1030-1060,c:1182-1347 [72627]
      27. 1shz
        complexed with alf, gdp, mg
        
        region a:46-75,a:201-371 [118965]
      28. 1shz
        automatically matched to 1SHZ A:46-75,A:201-371
        complexed with alf, gdp, mg
        
        region d:46-75,d:201-371 [118967]
      29. 2g83
        automatically matched to d1kjya2
        complexed with alf, gdp, mg
        
        region a:33-60,a:182-345 [134763]
      30. 2g83
        automatically matched to d1kjya2
        complexed with alf, gdp, mg
        
        region b:33-60,b:182-345 [134765]
      31. 1fqj
        complexed with alf, gdp, mg
        
        region a:28-60,a:182-344 [32098]
        region d:28-60,d:182-342 [32099]
      32. 1got
        species chimera
        complexed with gdp
        
        region a:6-60,a:182-343 [32096]
      33. 1fqk
        species chimera
        complexed with alf, gdp, mg
        
        region a:28-60,a:182-345 [32103]
        region c:29-60,c:182-345 [32104]
    3. Mouse (Mus musculus) [TaxId: 10090] [142225] (6)
      SQ P21279 38-66,184-354! SQ P27600 53-81,204-370! SQ P27601 47-75,202-372
      1. 1zcb
        G alpha i/13
        complexed with gdp
        
        region a:47-75,a:202-372 [124902]
      2. 2bcj
        G alpha-q
        complexed with ace, alf, gdp, mg; mutant
        
        region q:38-66,q:184-354 [128292]
      3. 1zca
        G alpha i/12
        complexed with alf, gdp, mg
        
        region a:54-82,a:205-371 [124898]
      4. 1zca
        automatically matched to 1ZCA A:54-82,A:205-371
        complexed with alf, gdp, mg
        
        region b:54-82,b:205-370 [124900]
      5. 2rgn
        automatically matched to d2bcjq2
        complexed with alf, gdp, mg
        
        region a:38-66,a:184-354 [152013]
      6. 2rgn
        automatically matched to d2bcjq2
        complexed with alf, gdp, mg
        
        region d:38-66,d:184-354 [152016]
    4. Homo sapiens [TaxId: 9606] [159560] (4)
      1. 2om2
        automatically matched to d1kjya2
        complexed with gdp, mg
        
        region a:30-60,a:182-349 [148862]
      2. 2om2
        automatically matched to d1kjya2
        complexed with gdp, mg
        
        region c:1030-1060,c:1182-1347 [148864]
      3. 2ebc
        automatically matched to d1agra2
        complexed with gdp; mutant
        
        region a:9-60,a:182-354 [146765]
      4. 2pz2
        automatically matched to d1agra2
        complexed with gdp, so4; mutant
        
        region a:11-60,a:182-354 [149961]
  23. Elongation factor Tu (EF-Tu), N-terminal (G) domain [52626]
    1. Escherichia coli [TaxId: 562] [52627] (10)
      SQ P02990
      1. 1efc
        complexed with gdp, mg
        
        region a:8-204 [32113]
        region b:8-204 [32114]
      2. 1dg1
        
        region g:9-204 [32117]
        region h:9-204 [32118]
      3. 1efu
        
        region a:9-204 [32115]
        region c:9-204 [32116]
      4. 2bvn
        automatically matched to d1ob2a3
        complexed with enx, gnp, mg
        
        region a:9-204 [129284]
      5. 2bvn
        automatically matched to d1ob2a3
        complexed with enx, gnp, mg
        
        region b:9-204 [129287]
      6. 1d8t
        complexed with ace, gdp, gea, mg
        
        region a:3-204 [32119]
        region b:9-204 [32120]
      7. 2fx3
        automatically matched to d1ob2a3
        complexed with gdp, mg
        
        region a:9-204 [134273]
      8. 1etu
        one domain only
        complexed with gdp, mg
        
        region a:5-200 [64737]
      9. 1efm
        one domain only
        complexed with gdp, mg
        
        region a:12-190 [64732]
      10. 1ob2
        complexed with 2mg, 5mc, 7mg, gnp, h2u, kir, m2g, mad, mg, omc, omg, pha, psu, suc, yg
        
        region a:1-204 [103902]
    2. Thermus aquaticus [TaxId: 271] [52628] (4)
      1. 1b23
        complexed with aac, gnp, h2u, mg, mia, psu, s4u, so4
        
        region p:1-212 [32124]
      2. 1eft
        complexed with gnp, mg
        
        region a:1-212 [32123]
      3. 1ttt
        protein/tRNA complex; complexed with 1ma, 2mg, 5mc, 5mu, 7mg, gnp, h2u, m2g, mg, omc, omg, psu, yg
        
        region a:1-212 [32125]
        region b:1-212 [32126]
        region c:1-212 [32127]
      4. 1tui
        complexed with gdp, mg
        
        region a:9-212 [32128]
        region b:9-212 [32129]
        region c:9-212 [32130]
    3. Thermus thermophilus [TaxId: 274] [52629] (9)
      1. 2c78
        automatically matched to d1aipa3
        complexed with gnp, mg, pul
        
        region a:9-212 [130039]
      2. 2c77
        automatically matched to d1aipa3
        complexed with gea, gnp, mg, peg
        
        region a:9-212 [130036]
      3. 1exm
        complexed with gnp, mg
        
        region a:3-212 [32131]
      4. 1ha3
        complexed with bme, gdp, mau, mg
        
        region a:3-212 [60871]
        region b:3-212 [60874]
      5. 1aip
        
        region a:9-212 [32132]
        region b:9-212 [32133]
        region e:9-212 [32134]
        region f:9-212 [32135]
      6. 1ob5
        automatically matched to d1aipa3
        complexed with 2mg, 5mc, 5mu, 7mg, c, enx, gnp, h2u, m2g, mad, mg, omc, omg, pha, psu, yg
        
        region a:9-212 [118693]
      7. 1ob5
        automatically matched to d1aipa3
        complexed with 2mg, 5mc, 5mu, 7mg, c, enx, gnp, h2u, m2g, mad, mg, omc, omg, pha, psu, yg
        
        region c:9-212 [118696]
      8. 1ob5
        automatically matched to d1aipa3
        complexed with 2mg, 5mc, 5mu, 7mg, c, enx, gnp, h2u, m2g, mad, mg, omc, omg, pha, psu, yg
        
        region e:9-212 [118699]
      9. 1zc8
        automatically matched to d1aipa3
        complexed with du
        
        region y:9-212 [124895]
    4. Cow (Bos taurus), mitochondrial [TaxId: 9913] [52630] (2)
      SQ P49410 56-452
      1. 1d2e
        complexed with gdp, mo2, mo4
        
        region a:55-250 [32136]
        region b:55-250 [32137]
        region c:55-250 [32138]
        region d:55-250 [32139]
      2. 1xb2
        
        region a:56-250 [115056]
  24. Elongation factor eEF-1alpha, N-terminal (G) domain [52631]
    eukaryotic and archaeal homologue of EF-Tu
    1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [52632] (6)
      1. 1f60
        
        region a:2-240 [32140]
      2. 2b7c
        automatically matched to d1f60a3
        mutant
        
        region a:5-240 [128032]
      3. 1g7c
        complexed with 5gp
        
        region a:4-240 [32141]
      4. 1ije
        complexed with gdp
        
        region a:4-240 [62487]
      5. 2b7b
        automatically matched to d1f60a3
        complexed with gdp; mutant
        
        region a:2-240 [128029]
      6. 1ijf
        complexed with gdp, mg
        
        region a:2-240 [62491]
    2. Archaeon Sulfolobus solfataricus [TaxId: 2287] [69487] (2)
      SQ P35021
      1. 1jny
        complexed with gdp
        
        region a:4-227 [66984]
        region b:4-227 [66987]
      2. 1skq
        complexed with gdp, mg
        
        region a:4-227 [105680]
        region b:4-227 [105683]
  25. Elongation factor G (EF-G), N-terminal (G) domain [52633]
    has internal nucleotide exchange factor built in as an insertion subdomain
    1. Thermus thermophilus [TaxId: 274] [52634] (9)
      residues 160-252 comprise insertion subdomain
      1. 2bv3
        automatically matched to d1dar_2
        complexed with gnp, mg; mutant
        
        region a:7-282 [129238]
      2. 2efg
        complexed with gdp
        
        region a:7-282 [32143]
      3. 2bm0
        automatically matched to d1dar_2
        complexed with gdp, mg; mutant
        
        region a:4-282 [128749]
      4. 1fnm
        complexed with gdp, mg; mutant
        
        region a:6-282 [32144]
      5. 1dar
        complexed with gdp
        
        region a:1-282 [32142]
      6. 2bm1
        automatically matched to d1dar_2
        complexed with gdp, mg; mutant
        
        region a:4-282 [128754]
      7. 1efg
        complexed with gdp
        
        region a:1-282 [32146]
      8. 1elo
        
        region a:5-282 [32145]
      9. 1ktv
        
        region a:5-282 [91028]
        region b:5-282 [91032]
    2. Thermus thermophilus, EF-G-2 [TaxId: 274] [142226] (2)
      SQ Q5SI76 1-267
      TTHA1498
      1. 2dy1
        automatically matched to d1wdta2
        complexed with gtp, mg
        
        region a:8-274 [146608]
      2. 1wdt
        complexed with gtp, mg
        
        region a:8-274 [120912]
  26. Elongation factor 2 (eEF-2), N-terminal (G) domain [82404]
    1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [82405] (22)
      SQ P32324
      1. 1n0u
        complexed with so1
        
        region a:3-343 [79758]
      2. 1u2r
        complexed with apr, dde, gdp, mg, so1
        
        region a:3-343 [107618]
      3. 1n0v
        
        region c:2-343 [79763]
        region d:2-343 [79768]
      4. 2npf
        automatically matched to d1n0vc2
        complexed with gdp, mou
        
        region a:3-343 [138433]
      5. 2npf
        automatically matched to d1n0vc2
        complexed with gdp, mou
        
        region b:3-343 [138438]
      6. 1zm9
        automatically matched to d1n0vc2
        complexed with dde, p34
        
        region a:2-343 [125337]
      7. 1zm9
        automatically matched to d1n0vc2
        complexed with dde, p34
        
        region c:2-343 [125343]
      8. 1zm9
        automatically matched to d1n0vc2
        complexed with dde, p34
        
        region e:2-343 [125349]
      9. 1zm4
        automatically matched to d1n0vc2
        complexed with dde, tad
        
        region a:2-343 [125317]
      10. 1zm4
        automatically matched to d1n0vc2
        complexed with dde, tad
        
        region c:2-343 [125323]
      11. 1zm4
        automatically matched to d1n0vc2
        complexed with dde, tad
        
        region e:2-343 [125329]
      12. 2e1r
        automatically matched to d1n0vc2
        complexed with gdp, sod
        
        region a:2-343 [131967]
      13. 1zm3
        automatically matched to d1n0vc2
        complexed with dde
        
        region a:2-343 [125299]
      14. 1zm3
        automatically matched to d1n0vc2
        complexed with dde
        
        region c:2-343 [125305]
      15. 1zm3
        automatically matched to d1n0vc2
        complexed with dde
        
        region e:2-343 [125311]
      16. 1zm2
        automatically matched to d1n0vc2
        complexed with apr, dde
        
        region a:2-343 [125281]
      17. 1zm2
        automatically matched to d1n0vc2
        complexed with apr, dde
        
        region c:2-343 [125287]
      18. 1zm2
        automatically matched to d1n0vc2
        complexed with apr, dde
        
        region e:2-343 [125293]
      19. 2p8z
        automatically matched to d1n0vc2
        complexed with apr, dde, gnp, so1
        
        region t:3-343 [139552]
      20. 2p8x
        automatically matched to d1n0vc2
        complexed with apr, dde, gnp
        
        region t:3-343 [139542]
      21. 2p8y
        automatically matched to d1n0vc2
        complexed with apr, dde, gdp, so1
        
        region t:3-343 [139547]
      22. 2p8w
        automatically matched to d1n0vc2
        complexed with gnp
        
        region t:3-343 [139537]
  27. Initiation factor IF2/eIF5b, N-terminal (G) domain [52635]
    1. Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262] [52636] (3)
      1. 1g7s
        complexed with gdp
        
        region a:1-227 [32147]
      2. 1g7t
        complexed with gnp, mg
        
        region a:1-227 [32148]
      3. 1g7r
        
        region a:1-227 [32149]
  28. Initiation factor eIF2 gamma subunit, N-terminal (G) domain [75204]
    includes rubredoxin-like zinc finger insert domain, res. 56-83, similar that of the Nop10-like family (scop_fa 144211)
    1. Archaeon Pyrococcus abyssi [TaxId: 29292] [75205] (5)
      1. 1kk1
        complexed with gnp, mg, zn; mutant
        
        region a:6-200 [72636]
      2. 1kk3
        complexed with gdp, mg, zn
        
        region a:6-200 [72642]
      3. 1kjz
        complexed with zn; mutant
        
        region a:6-200 [72630]
      4. 1kk0
        complexed with mse, zn
        
        region a:6-200 [72633]
      5. 1kk2
        complexed with gdp, mg, zn; mutant
        
        region a:6-200 [72639]
    2. Archaeon Methanococcus jannaschii [TaxId: 2190] [102365] (1)
      1. 1s0u
        structural genomics
        complexed with zn
        
        region a:34-229 [98304]
    3. Sulfolobus solfataricus [TaxId: 2287] [142227] (6)
      SQ Q980A5 2-206
      1. 2qn6
        automatically matched to d2ahoa3
        complexed with gdp, mg
        
        region a:2-206 [150913]
      2. 2pmd
        automatically matched to d2ahoa3
        complexed with gdp, gnp, ppv
        
        region a:2-206 [149665]
      3. 2pmd
        automatically matched to d2ahoa3
        complexed with gdp, gnp, ppv
        
        region b:2-206 [149668]
      4. 2plf
        automatically matched to d2ahoa3
        
        region a:2-206 [149627]
      5. 2aho
        complexed with gnp, mg, zn
        
        region a:2-206 [126769]
      6. 2qmu
        automatically matched to d2ahoa3
        complexed with gdp, po4, zn
        
        region a:2-206 [150896]
  29. GTPase Era, N-terminal domain [52637]
    1. Escherichia coli [TaxId: 562] [52638] (3)
      1. 1ega
        complexed with so4
        
        region a:4-182 [32150]
        region b:4-182 [32151]
      2. 1x1l
        automatically matched to d1egaa1
        
        region x:4-182 [121590]
      3. 1x18
        automatically matched to d1egaa1
        complexed with du
        
        region x:4-182 [121577]
    2. Thermus thermophilus [TaxId: 274] [117533] (1)
      SQ Q5SM23
      1. 1wf3
        Structural genomics target
        complexed with gnp, gol, mg
        
        region a:3-180 [114574]
  30. Probable tRNA modification GTPase TrmE (MnmE), G domain [102366]
    1. Escherichia coli [TaxId: 562] [102367] (11)
      1. 2gj8
        automatically matched to d1rfla_
        complexed with alf, gdp, k, mg, se
        
        region a:216-376 [135270]
      2. 2gj8
        automatically matched to d1rfla_
        complexed with alf, gdp, k, mg, se
        
        region b:217-376 [135271]
      3. 2gj8
        automatically matched to d1rfla_
        complexed with alf, gdp, k, mg, se
        
        region c:216-376 [135272]
      4. 2gj8
        automatically matched to d1rfla_
        complexed with alf, gdp, k, mg, se
        
        region d:216-376 [135273]
      5. 2gja
        automatically matched to d1rfla_
        complexed with alf, gdp, mg, nh4
        
        region a:216-376 [135278]
      6. 2gja
        automatically matched to d1rfla_
        complexed with alf, gdp, mg, nh4
        
        region b:216-375 [135279]
      7. 2gj9
        automatically matched to d1rfla_
        complexed with alf, gdp, mg, rb
        
        region a:216-376 [135274]
      8. 2gj9
        automatically matched to d1rfla_
        complexed with alf, gdp, mg, rb
        
        region b:217-376 [135275]
      9. 2gj9
        automatically matched to d1rfla_
        complexed with alf, gdp, mg, rb
        
        region c:216-376 [135276]
      10. 2gj9
        automatically matched to d1rfla_
        complexed with alf, gdp, mg, rb
        
        region d:217-376 [135277]
      11. 1rfl
        low-resolution NMR structure
        
        chain a [97384]
  31. Probable GTPase Der, N-terminal and middle domains [82406]
    member of EngA subfamily of GTPases; contains two G domains
    1. Thermotoga maritima [TaxId: 2336] [82407] (1)
      1. 1mky
        complexed with gdp, mse, po4
        
        region a:2-172 [79250]
        region a:173-358 [79251]
  32. Obg GTP-binding protein middle domain [82408]
    1. Bacillus subtilis [TaxId: 1423] [82409] (1)
      1. 1lnz
        complexed with g4p, mg, mse; mutant
        
        region a:158-342 [78113]
        region b:158-337 [78115]
    2. Thermus thermophilus [TaxId: 274] [102368] (1)
      TT1381
      1. 1udx
        complexed with act, mpd
        
        region a:157-336 [99229]
  33. YchF GTP-binding protein N-terminal domain [82410]
    Member of the Obg family of GTPases; contains an alpha-hairpin insert subdomain
    1. Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896] [82411] (1)
      1. 1ni3
        complexed with mse, so4
        
        region a:11-306 [80531]
    2. Haemophilus influenzae [TaxId: 727] [89666] (1)
      HI0393
      1. 1jal
        structural genomics
        
        region a:1-278 [84138]
        region b:1-278 [84140]
  34. Probable GTPase EngB [89667]
    1. Escherichia coli [TaxId: 562] [89668] (1)
      1. 1pui
        structural genomics
        complexed with so4
        
        chain a [88292]
        chain b [88293]
    2. Bacillus subtilis [TaxId: 1423] [110534] (3)
      SQ P38424
      1. 1svi
        complexed with gdp
        
        chain a [106048]
      2. 1sul
        
        chain a [106023]
        chain b [106024]
      3. 1svw
        complexed with gtp, mg
        
        chain a [106056]
        chain b [106057]
  35. Probable GTPase YlqF [89669]
    naturally occurring circular permutation of G-domain; includes C-terminal all-alpha subdomain
    1. Bacillus subtilis [TaxId: 1423] [89670] (1)
      1. 1puj
        structural genomics
        complexed with gnp, mg
        
        chain a [88294]
  36. Interferon-induced guanylate-binding protein 1 (GBP1), N-terminal domain [52639]
    1. Human (Homo sapiens) [TaxId: 9606] [52640] (2)
      1. 1f5n
        complexed with gnp, mg; mutant
        
        region a:7-283 [32152]
      2. 1dg3
        
        region a:6-283 [32153]
  37. Dynamin G domain [69488]
    the family common core is decorated with large insertions
    1. Dictyostelium discoideum [TaxId: 44689] [69489] (2)
      1. 1jwy
        complexed with adp, gdp, glc, mg
        
        chain b [67401]
      2. 1jx2
        complexed with adp, glc, mg
        
        chain b [67404]
    2. Rat (Rattus norvegicus) [TaxId: 10116] [142228] (1)
      SQ P21575 6-304
      Dynamin-1
      1. 2aka
        
        region b:6-304 [126914]
  38. Eukaryotic peptide chain release factor ERF2, G domain [110535]
    1. Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896] [110536] (3)
      SQ O74718
      1. 1r5b
        
        region a:215-459 [104805]
      2. 1r5n
        complexed with gdp
        
        region a:215-459 [104808]
      3. 1r5o
        complexed with gnp
        
        region a:215-459 [104811]
  39. Rab9a [110537]
    1. Dog (Canis familiaris) [TaxId: 9615] [110538] (1)
      SQ P24408
      1. 1s8f
        complexed with bez, cl, gdp, mg, sr
        
        chain a [105370]
        chain b [105371]
    2. Human (Homo sapiens) [TaxId: 9606] [110539] (1)
      SQ P51151 2-175 # 100% sequence identity do the dog protein (SQ P24408 2-175)
      1. 1wms
        complexed with gdp
        
        chain a [109414]
        chain b [109415]
    3. Mouse (Mus musculus) [TaxId: 10090] [142229] (1)
      SQ Q9R0M6 4-175
      1. 1yzl
        complexed with gnp, mg
        
        region a:4-175 [124282]
  40. Rab7 [110540]
    1. Rat (Rattus norvegicus) [TaxId: 10116] [110541] (4)
      SQ P09527
      1. 1vg8
        complexed with gnp, mg
        
        chain a [108606]
        chain b [108607]
        chain c [108608]
        chain d [108609]
      2. 1vg1
        complexed with gdp, mg
        
        chain a [108599]
      3. 1vg0
        complexed with cl, gdp, ger, mg, pg4; mutant
        
        chain b [108598]
      4. 1vg9
        complexed with gdp, k, mg, p33; mutant
        
        chain b [108612]
        chain d [108615]
        chain f [108618]
        chain h [108621]
    2. Human (Homo sapiens) [TaxId: 9606] [142230] (5)
      SQ P51149 7-182
      1. 1t91
        complexed with gtp, mg; mutant
        
        region a:7-182 [119192]
      2. 1t91
        automatically matched to 1T91 A:7-182
        complexed with gtp, mg; mutant
        
        region b:7-182 [119193]
      3. 1t91
        automatically matched to 1T91 A:7-182
        complexed with gtp, mg; mutant
        
        region c:7-182 [119194]
      4. 1t91
        automatically matched to 1T91 A:7-182
        complexed with gtp, mg; mutant
        
        region d:7-182 [119195]
      5. 1yhn
        automatically matched to 1T91 A:7-182
        complexed with gtp, mg; mutant
        
        region a:7-182 [123178]
  41. Probable GTPase EngC (YjeQ), C-terminal domain [110542]
    circularly permuted G-domain similar to B. sutilis YlqF; distinct extra C-terminal all-alpha subdomain
    1. Thermotoga maritima [TaxId: 2336] [110543] (1)
      SQ Q9X242 # TM1717
      1. 1u0l
        complexed with gdp, zn
        
        region a:69-293 [107552]
        region b:369-593 [107554]
        region c:669-893 [107556]
    2. Bacillus subtilis [TaxId: 1423] [117534] (1)
      SQ O34530
      1. 1t9h
        complexed with act, ca, ium, zn
        
        region a:68-298 [112359]
  42. GTPase Ytp1 [110544]
    1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [110545] (2)
      SQ P01123
      1. 2bcg
        automatically matched to d1ukvy_
        complexed with gdp, ger, mg, trs; mutant
        
        region y:3-196 [128285]
      2. 1ukv
        complexed with gdp, ger, mg
        
        chain y [107918]
  43. Interferon-inducible GTPase [110546]
    G domain is inserted in all-alpha domain
    1. Mouse (Mus musculus) [TaxId: 10090] [110547] (5)
      SQ Q9QZ85 # all-alpha domain (14-68,252-415)
      1. 1tq4
        complexed with gdp, mg; mutant
        
        chain a [107201]
      2. 1tpz
        complexed with edo, gdp, mg, mpd
        
        chain a [107194]
        chain b [107195]
      3. 1tqd
        complexed with mes, so4
        
        chain a [107222]
        chain b [107223]
      4. 1tq6
        complexed with gnp, mg; mutant
        
        chain a [107202]
      5. 1tq2
        complexed with gnp, mg, mpd
        
        chain a [107199]
        chain b [107200]
  44. TrmE GTPase domain [117535]
    1. Thermotoga maritima [TaxId: 2336] [117536] (2)
      SQ Q9WYA4
      1. 1xzp
        complexed with so4
        
        region a:212-371 [116255]
      2. 1xzq
        complexed with fon
        
        region a:212-371 [116259]
  45. Elongation factor SelB, N-terminal domain [117537]
    1. Methanococcus maripaludis [TaxId: 39152] [117538] (3)
      SQ Q8J307
      1. 1wb1
        complexed with cmh, dxc, gdp, mg, so4
        
        region a:1-179 [114439]
        region b:1-179 [114442]
        region c:1-179 [114446]
        region d:5-179 [114449]
      2. 1wb2
        complexed with cmh, dxc, so4
        
        region a:1-179 [114453]
        region b:1-179 [114456]
        region c:1-179 [114460]
        region d:5-179 [114463]
      3. 1wb3
        complexed with cmh, dxc, gnp, mg, so4
        
        region a:1-179 [114467]
        region b:1-179 [114470]
        region c:1-179 [114474]
        region d:5-179 [114477]
  46. Rab23 [142231]
    1. Mouse (Mus musculus) [TaxId: 10090] [142232] (2)
      SQ P35288 8-171
      1. 1z2a
        automatically matched to 1Z22 A:8-171
        complexed with gdp, mg
        
        region a:8-171 [124374]
      2. 1z22
        complexed with gdp, mg
        
        region a:8-171 [124368]
  47. Rab18 [142233]
    1. Human (Homo sapiens) [TaxId: 9606] [142234] (1)
      SQ Q9NP72 2-178
      1. 1x3s
        complexed with gnp, mg
        
        region a:2-178 [121670]
  48. Rab31 [142235]
    1. Human (Homo sapiens) [TaxId: 9606] [142236] (1)
      SQ Q13636 3-167
      1. 2fg5
        complexed with gnp, mg
        
        region a:3-167 [133401]
  49. Rab11b [142237]
    1. Human (Homo sapiens) [TaxId: 9606] [142238] (2)
      SQ Q15907 7-181
      1. 2f9l
        complexed with gdp, mg
        
        region a:8-182 [133166]
      2. 2f9m
        automatically matched to 2F9L A:8-182
        complexed with gnp, mg, ni
        
        region a:8-182 [133167]
  50. Rab30 [142239]
    1. Human (Homo sapiens) [TaxId: 9606] [142240] (1)
      SQ Q15771 5-175
      1. 2ew1
        complexed with gnp, mg
        
        region a:4-174 [132446]
  51. Rab1a [142241]
    1. Human (Homo sapiens) [TaxId: 9606] [142242] (1)
      SQ P62820 7-175
      1. 2fol
        complexed with gdp, mg, unx
        
        region a:5-173 [133883]
  52. RhoB [142243]
    1. Human (Homo sapiens) [TaxId: 9606] [142244] (1)
      SQ P62745 4-185
      1. 2fv8
        complexed with gdp
        
        region a:4-184 [134199]
  53. RhoC [142245]
    1. Human (Homo sapiens) [TaxId: 9606] [142246] (2)
      SQ P08134 1-179
      1. 1z2c
        complexed with gnp, mg; mutant
        
        region a:1-179 [124376]
      2. 1z2c
        automatically matched to 1Z2C A:1-179
        complexed with gnp, mg; mutant
        
        region c:1-179 [124378]
  54. Rab4a [142247]
    1. Human (Homo sapiens) [TaxId: 9606] [142248] (5)
      SQ P20338 2-172! SQ P20338 4-172! SQ P20338 4-184
      1. 2bme
        automatically matched to 2BMD A:6-186
        complexed with bme, gnp, mg, trs
        
        region a:6-179 [128790]
      2. 2bmd
        complexed with gdp, gol
        
        region a:6-186 [128789]
      3. 1yu9
        complexed with gnp, mg, so4
        
        region a:2-172 [124045]
      4. 1z0k
        complexed with gtp, mes, mg
        
        region a:4-172 [124321]
      5. 1z0k
        automatically matched to 1Z0K A:4-172
        complexed with gtp, mes, mg
        
        region c:5-172 [124323]
  55. Centaurin gamma 1, G domain [142249]
    1. Human (Homo sapiens) [TaxId: 9606] [142250] (1)
      SQ Q99490 402-576
      1. 2bmj
        
        region a:66-240 [128797]
  56. GTP-binding protein PH0525 [142251]
    Member of the Obg family of GTPases; contains an alpha-hairpin insert subdomain
    1. Pyrococcus horikoshii [TaxId: 53953] [142252] (1)
      SQ O58261 1-319
      1. 1wxq
        
        region a:1-319 [121406]
  57. Rab-22a [142253]
    1. Mouse (Mus musculus) [TaxId: 10090] [142254] (2)
      SQ P35285 2-167! SQ P35285 2-168
      1. 1z0j
        complexed with gol, gtp, mg, trs; mutant
        
        region a:2-168 [124319]
      2. 1yvd
        complexed with gnp, mg
        
        region a:2-167 [124095]
  58. Rac3 [142255]
    1. Human (Homo sapiens) [TaxId: 9606] [142256] (2)
      SQ P60763 3-177
      1. 2c2h
        complexed with ca, gdp, mg, so4; mutant
        
        region a:3-177 [129668]
      2. 2c2h
        automatically matched to 2C2H A:3-177
        complexed with ca, gdp, mg, so4; mutant
        
        region b:3-177 [129669]
  59. GTP-binding protein engB [142257]
    1. Pyrococcus horikoshii [TaxId: 53953] [142258] (3)
      SQ O57939 28-211
      PH0200
      1. 2cxx
        complexed with gdp
        
        region a:2-185 [131013]
      2. 2cxx
        automatically matched to 2CXX A:2-185
        complexed with gdp
        
        region b:2-185 [131014]
      3. 2cxx
        automatically matched to 2CXX A:2-185
        complexed with gdp
        
        region c:2-185 [131015]
  60. Rab26 [142259]
    1. Human (Homo sapiens) [TaxId: 9606] [142260] (1)
      SQ Q9ULW5 58-227
      1. 2g6b
        complexed with gnp, mg, unx
        
        region a:58-227 [134701]
  61. RhoQ [142261]
    1. Human (Homo sapiens) [TaxId: 9606] [142262] (2)
      SQ P17081 1-185
      1. 2atx
        complexed with gnp, mg
        
        region a:9-193 [127315]
      2. 2atx
        automatically matched to 2ATX A:9-193
        complexed with gnp, mg
        
        region b:9-193 [127316]
  62. Rab27b [142263]
    1. Human (Homo sapiens) [TaxId: 9606] [142264] (2)
      SQ O00194 4-189
      1. 2f7s
        complexed with gdp, mg
        
        region a:5-190 [133104]
      2. 2f7s
        automatically matched to 2F7S A:5-190
        complexed with gdp, mg
        
        region b:6-189 [133105]
  63. Rab2a [142265]
    1. Human (Homo sapiens) [TaxId: 9606] [142266] (4)
      SQ P61019 2-170
      1. 1z0a
        complexed with gdp, mg
        
        region a:2-170 [124307]
      2. 1z0a
        automatically matched to 1Z0A A:2-170
        complexed with gdp, mg
        
        region b:3-169 [124308]
      3. 1z0a
        automatically matched to 1Z0A A:2-170
        complexed with gdp, mg
        
        region c:2-170 [124309]
      4. 1z0a
        automatically matched to 1Z0A A:2-170
        complexed with gdp, mg
        
        region d:3-170 [124310]
  64. di-Ras2 [142267]
    1. Human (Homo sapiens) [TaxId: 9606] [142268] (2)
      SQ Q96HU8 6-176
      1. 2erx
        complexed with gdp, mg, po4
        
        region a:6-176 [132304]
      2. 2erx
        automatically matched to 2ERX A:6-176
        complexed with gdp, mg, po4
        
        region b:6-176 [132305]
  65. Sulfate adenylate transferase subunit cysN/C, EF-Tu domain G-like domain [142269]
    1. Pseudomonas syringae pv. tomato [TaxId: 323] [142270] (1)
      SQ Q87WW1 16-237
      1. 1zun
        complexed with ags, gdp, mg, na
        
        region b:16-237 [125679]
  66. Rab14 [142271]
    1. Human (Homo sapiens) [TaxId: 9606] [142272] (2)
      SQ P61106 7-174
      1. 1z0f
        automatically matched to 2AED A:8-175
        complexed with gdp, mg
        
        region a:8-173 [124313]
      2. 2aed
        complexed with gdp, mg, unx
        
        region a:8-175 [126619]
  67. r-Ras [142273]
    1. Human (Homo sapiens) [TaxId: 9606] [142274] (1)
      SQ P10301 24-196
      1. 2fn4
        complexed with gdp, mg
        
        region a:24-196 [133806]
  68. GTP-binding protein RheB [142275]
    1. Human (Homo sapiens) [TaxId: 9606] [142276] (3)
      SQ Q15382 3-169
      1. 1xtq
        complexed with gdp, mg
        
        region a:3-169 [122297]
      2. 1xtr
        automatically matched to 1XTQ A:3-169
        complexed with gnp, gol, mg
        
        region a:3-169 [122298]
      3. 1xts
        automatically matched to 1XTQ A:3-169
        complexed with gtp, mg
        
        region a:3-169 [122299]
  69. di-Ras1 [142277]
    1. Human (Homo sapiens) [TaxId: 9606] [142278] (4)
      SQ O95057 4-176
      1. 2gf0
        complexed with gdp, mg
        
        region a:4-176 [135066]
      2. 2gf0
        automatically matched to 2GF0 A:4-176
        complexed with gdp, mg
        
        region b:4-176 [135067]
      3. 2gf0
        automatically matched to 2GF0 A:4-176
        complexed with gdp, mg
        
        region c:6-176 [135068]
      4. 2gf0
        automatically matched to 2GF0 A:4-176
        complexed with gdp, mg
        
        region d:6-175 [135069]
  70. Rab-33b [142279]
    1. Mouse (Mus musculus) [TaxId: 10090] [142280] (2)
      SQ O35963 32-196
      1. 1z06
        complexed with gnp, mg
        
        region a:32-196 [124301]
      2. 2g77
        complexed with af3, gdp, mg; mutant
        
        region b:30-202 [145186]
  71. r-Ras2 [142281]
    1. Human (Homo sapiens) [TaxId: 9606] [142282] (2)
      SQ P62070 10-180
      1. 2ery
        complexed with gdp, mg
        
        region a:10-180 [132306]
      2. 2ery
        automatically matched to 2ERY A:10-180
        complexed with gdp, mg
        
        region b:13-180 [132307]
  72. Ras-related protein M-Ras (XRas) [142283]
    1. Mouse (Mus musculus) [TaxId: 10090] [142284] (2)
      SQ O08989 10-178
      1. 1x1r
        complexed with gdp, mg
        
        region a:10-178 [121595]
      2. 1x1s
        automatically matched to 1X1R A:10-178
        complexed with gnp, mg
        
        region a:11-178 [121596]
  73. Rab21 [142285]
    1. Human (Homo sapiens) [TaxId: 9606] [142286] (10)
      SQ Q9UL25 16-182
      1. 1z08
        complexed with gnp, mg; mutant
        
        region a:17-183 [124303]
      2. 1z08
        automatically matched to 1Z08 A:17-183
        complexed with gnp, mg; mutant
        
        region b:17-183 [124304]
      3. 1z08
        automatically matched to 1Z08 A:17-183
        complexed with gnp, mg; mutant
        
        region c:17-183 [124305]
      4. 1z08
        automatically matched to 1Z08 A:17-183
        complexed with gnp, mg; mutant
        
        region d:18-183 [124306]
      5. 2ot3
        
        region b:17-182 [145726]
      6. 1yzt
        complexed with gnp, mg
        
        region a:17-183 [124288]
      7. 1yzt
        automatically matched to 1YZT A:17-183
        complexed with gnp, mg
        
        region b:17-183 [124289]
      8. 1z0i
        automatically matched to 1YZT A:17-183
        complexed with gdp, mg
        
        region a:17-183 [124318]
      9. 1yzu
        automatically matched to 1YZT A:17-183
        complexed with gnp, mg
        
        region a:17-181 [124290]
      10. 1yzu
        automatically matched to 1YZT A:17-183
        complexed with gnp, mg
        
        region b:17-181 [124291]
  74. Rab2b [142287]
    1. Human (Homo sapiens) [TaxId: 9606] [142288] (1)
      SQ Q8WUD1 4-176
      1. 2a5j
        complexed with gdp, mg
        
        region a:9-181 [126175]
  75. GTP-binding protein GEM [142289]
    1. Human (Homo sapiens) [TaxId: 9606] [142290] (1)
      SQ P55040 73-244
      1. 2g3y
        complexed with gdp
        
        region a:73-244 [134574]
  76. Ras-like estrogen-regulated growth inhibitor, RERG [142291]
    1. Human (Homo sapiens) [TaxId: 9606] [142292] (1)
      SQ Q96A58 5-172
      1. 2atv
        complexed with gdp, mg
        
        region a:5-172 [127308]
  77. Rab8a [142293]
    1. Mouse (Mus musculus) [TaxId: 10090] [142294] (2)
      SQ P55258 3-175
      1. 2fu5
        complexed with bme, zn
        
        region c:3-175 [134104]
      2. 2fu5
        automatically matched to 2FU5 C:3-175
        complexed with bme, zn
        
        region d:3-175 [134105]
  78. Rad [142295]
    1. Human (Homo sapiens) [TaxId: 9606] [142296] (2)
      SQ P55042 91-258
      1. 2gjs
        complexed with gdp, mg
        
        region a:91-258 [135287]
      2. 2gjs
        automatically matched to 2GJS A:91-258
        complexed with gdp, mg
        
        region b:91-256 [135288]
12. Motor proteins [52641] (15)
  1. Myosin S1, motor domain [52642]
    common fold is interrupted with some all-alpha subdomains
    1. Chicken (Gallus gallus), pectoral muscle [TaxId: 9031] [52643] (4)
      1. 1br2
        complexed with adp, alf, mg
        
        region a:80-789 [32155]
        region b:80-789 [32156]
        region c:80-789 [32157]
        region d:80-789 [32158]
        region e:80-789 [32159]
        region f:80-789 [32160]
      2. 2mys
        complexed with mg, mly, so4
        
        region a:4-33,a:80-843 [32154]
      3. 1br1
        complexed with adp, alf, mg
        
        region a:2-33,a:80-821 [32161]
        region c:2-33,c:80-821 [32162]
        region e:2-33,e:80-821 [32163]
        region g:2-33,g:80-821 [32164]
      4. 1br4
        complexed with adp, bef, mg
        
        region a:2-33,a:80-821 [32165]
        region c:2-33,c:80-821 [32166]
        region e:2-33,e:80-821 [32167]
        region g:2-33,g:80-821 [32168]
    2. Chicken (Gallus gallus), Va isoform [TaxId: 9031] [102369] (3)
      1. 1w7j
        automatically matched to d1oe9a2
        complexed with adp, bef, mg
        
        region a:63-792 [120689]
      2. 1oe9
        complexed with so4
        
        region a:63-795 [92793]
      3. 1w7i
        automatically matched to d1oe9a2
        complexed with adp
        
        region a:63-795 [120686]
    3. Bay scallop (Aequipecten irradians) [TaxId: 31199] [52644] (11)
      SQ P24733 3-836 ! SQ P24733 6-837
      1. 1kk8
        complexed with adp, bef, ca, gol, mg; mutant
        
        region a:1-28,a:77-837 [77429]
      2. 1qvi
        complexed with adp, ca, mg, vo4
        
        region a:6-28,a:77-837 [96428]
      3. 1b7t
        complexed with adp, ca, mg
        
        region a:5-28,a:77-835 [32169]
      4. 1sr6
        complexed with ca, mg, so4
        
        region a:6-28,a:77-837 [105954]
      5. 1s5g
        complexed with adp, ca, mg, so4
        
        region a:3-28,a:77-836 [105264]
      6. 1l2o
        complexed with adp, ca, mg, pdm
        
        region a:5-28,a:77-835 [77659]
      7. 1kk7
        complexed with ca, mg, so4
        
        region a:5-28,a:77-837 [77425]
      8. 1kqm
        complexed with anp, ca, mg
        
        region a:5-28,a:77-835 [77489]
      9. 1kwo
        complexed with ags, ca, mg, pdm
        
        region a:5-28,a:77-835 [77570]
      10. 1dfl
        complexed with adp, ca, mg, vo4
        
        region a:5-28,a:77-835 [32171]
        region b:5-28,b:77-835 [32172]
      11. 1dfk
        complexed with ca
        
        region a:6-28,a:77-835 [32170]
    4. Dictyostelium discoideum [TaxId: 44689] [52645] (18)
      1. 1lvk
        complexed with bef, mg, mnt; mutant
        
        region a:2-33,a:80-759 [32173]
      2. 1vom
        complexed with adp, mg, vo4
        
        region a:2-33,a:80-747 [32174]
      3. 1d0x
        
        region a:2-33,a:80-759 [32180]
      4. 1d0y
        
        region a:2-33,a:80-759 [32178]
      5. 1d0z
        
        region a:2-33,a:80-759 [32181]
      6. 1mmd
        complexed with adp, bef, mg; mutant
        
        region a:2-33,a:80-759 [32175]
      7. 1jwy
        complexed with adp, gdp, glc, mg
        
        region a:13-30,a:80-776 [67400]
      8. 1d1b
        
        region a:2-33,a:80-759 [32182]
      9. 1fmv
        complexed with cl
        
        region a:2-33,a:80-759 [32177]
      10. 1jx2
        complexed with adp, glc, mg
        
        region a:13-30,a:80-776 [67403]
      11. 1mmg
        complexed with ags, mg; mutant
        
        region a:2-33,a:80-759 [32176]
      12. 1mmn
        complexed with anp, mg; mutant
        
        region a:2-33,a:80-759 [32179]
      13. 1d1c
        
        region a:2-33,a:80-759 [32185]
      14. 1d1a
        
        region a:2-33,a:80-759 [32186]
      15. 1fmw
        complexed with atp, mg
        
        region a:2-33,a:80-759 [32183]
      16. 1mma
        complexed with adp, mg; mutant
        
        region a:2-33,a:80-759 [32184]
      17. 1mne
        complexed with mg, pop; mutant
        
        region a:2-33,a:80-759 [32187]
      18. 1mnd
        complexed with adp, alf, mg; mutant
        
        region a:2-33,a:80-690 [32188]
    5. Dictyostelium discoideum, class-I myosin MyoE [TaxId: 44689] [75206] (1)
      lacks the SH3-like insert domain
      1. 1lkx
        complexed with adp, mg, vo4
        
        chain a [73981]
        chain b [73982]
        chain c [73983]
        chain d [73984]
  2. Kinesin [52646]
    1. Human (Homo sapiens) [TaxId: 9606] [52647] (2)
      1. 1bg2
        complexed with act, adp, mg
        
        chain a [32189]
      2. 1mkj
        complexed with adp, mg, so4
        
        chain a [79239]
    2. Rat (Rattus norvegicus) [TaxId: 10116] [52648] (2)
      1. 2kin
        complexed with adp, so4; mutant
        
        chain a,b [32190]
      2. 3kin
        complexed with adp
        
        chain a,b [32191]
        chain c,d [32192]
    3. Mouse (Mus musculus), kif1a [TaxId: 10090] [64017] (12)
      SQ P33173 3-355
      1. 2zfi
        automatically matched to d1vfva_
        complexed with adp, mg
        
        region a:4-352 [154414]
      2. 1vfv
        complexed with anp, mg
        
        chain a [108592]
      3. 1i6i
        complexed with acp, mg, trs; mutant
        
        chain a [61844]
      4. 1i5s
        complexed with adp, mg; mutant
        
        chain a [61822]
      5. 1vfw
        complexed with anp, mg
        
        chain a [108593]
      6. 1vfz
        complexed with adp, mg, vo4
        
        chain a [108595]
      7. 2zfm
        automatically matched to d1vfva_
        complexed with adp
        
        region a:4-352 [154418]
      8. 1vfx
        complexed with adp, af3, mg, trs
        
        chain a [108594]
      9. 2zfl
        automatically matched to d1vfva_
        complexed with adp
        
        region a:4-352 [154417]
      10. 2zfj
        automatically matched to d1vfva_
        complexed with adp, mg
        
        region a:5-352 [154415]
      11. 2zfk
        automatically matched to d1vfva_
        complexed with adp, mg, trs
        
        region a:6-352 [154416]
      12. 2hxf
        automatically matched to d1i6ia_
        complexed with anp, gdp, gtp, mg, ta1; mutant
        
        region c:3-361 [136842]
    4. Human (Homo sapiens), mitotic kinesin eg5 [TaxId: 9606] [64018] (34)
      1. 1x88
        automatically matched to d1q0bb_
        complexed with adp, mg, nat
        
        region a:18-362 [121797]
      2. 1x88
        automatically matched to d1q0bb_
        complexed with adp, mg, nat
        
        region b:18-362 [121798]
      3. 1q0b
        complexed with adp, mg, nat
        
        chain a [95502]
        chain b [95503]
      4. 2pg2
        automatically matched to d1q0bb_
        complexed with adp, k01, mg
        
        region a:18-362 [139688]
      5. 2pg2
        automatically matched to d1q0bb_
        complexed with adp, k01, mg
        
        region b:18-362 [139689]
      6. 1ii6
        complexed with adp, mg, no3
        
        chain a [62413]
        chain b [62414]
      7. 2gm1
        automatically matched to d1q0bb_
        complexed with 2az, adp, mg
        
        region a:18-362 [135350]
      8. 2gm1
        automatically matched to d1q0bb_
        complexed with 2az, adp, mg
        
        region b:18-362 [135351]
      9. 2gm1
        automatically matched to d1q0bb_
        complexed with 2az, adp, mg
        
        region d:18-362 [135352]
      10. 2gm1
        automatically matched to d1q0bb_
        complexed with 2az, adp, mg
        
        region e:18-362 [135353]
      11. 2uym
        automatically matched to d1q0bb_
        complexed with adp, k03, mg
        
        region a:18-362 [140037]
      12. 2uym
        automatically matched to d1q0bb_
        complexed with adp, k03, mg
        
        region b:18-362 [140038]
      13. 2fky
        automatically matched to d1q0bb_
        complexed with adp, mg, n2t
        
        region a:18-362 [133686]
      14. 2fky
        automatically matched to d1q0bb_
        complexed with adp, mg, n2t
        
        region b:18-362 [133687]
      15. 2uyi
        automatically matched to d1q0bb_
        complexed with adp, k02, mg
        
        region a:18-362 [140035]
      16. 2uyi
        automatically matched to d1q0bb_
        complexed with adp, k02, mg
        
        region b:18-362 [140036]
      17. 2fme
        automatically matched to d1q0bb_
        complexed with 3qc, adp, mg
        
        region a:18-362 [133771]
      18. 2fme
        automatically matched to d1q0bb_
        complexed with 3qc, adp, mg
        
        region b:18-362 [133772]
      19. 2fl6
        automatically matched to d1q0bb_
        complexed with adp, mg, n5t
        
        region a:18-362 [133707]
      20. 2fl6
        automatically matched to d1q0bb_
        complexed with adp, mg, n5t
        
        region b:18-362 [133708]
      21. 2g1q
        automatically matched to d1q0bb_
        complexed with adp, mg, n9h
        
        region a:18-362 [134521]
      22. 2g1q
        automatically matched to d1q0bb_
        complexed with adp, mg, n9h
        
        region b:18-362 [134522]
      23. 2fl2
        automatically matched to d1q0bb_
        complexed with adp, mg, n4t
        
        region a:18-362 [133704]
      24. 2fl2
        automatically matched to d1q0bb_
        complexed with adp, mg, n4t
        
        region b:18-362 [133705]
      25. 3cjo
        automatically matched to d1q0bb_
        complexed with adp, k30, mg
        
        region a:18-362 [156700]
      26. 3cjo
        automatically matched to d1q0bb_
        complexed with adp, k30, mg
        
        region b:18-362 [156701]
      27. 1yrs
        automatically matched to d1q0bb_
        complexed with adp, l47, mg
        
        region a:18-362 [123939]
      28. 1yrs
        automatically matched to d1q0bb_
        complexed with adp, l47, mg
        
        region b:18-362 [123940]
      29. 2q2y
        automatically matched to d1q0bb_
        complexed with adp, mg, mkr
        
        region a:18-362 [150024]
      30. 2q2y
        automatically matched to d1q0bb_
        complexed with adp, mg, mkr
        
        region b:18-362 [150025]
      31. 2ieh
        automatically matched to d1q0bb_
        complexed with adp, cl, k, mg, moy, pg4
        
        region a:18-362 [137309]
      32. 2ieh
        automatically matched to d1q0bb_
        complexed with adp, cl, k, mg, moy, pg4
        
        region b:18-362 [137310]
      33. 2q2z
        automatically matched to d1q0bb_
        complexed with adp, mg, mkk
        
        region a:18-362 [150026]
      34. 2q2z
        automatically matched to d1q0bb_
        complexed with adp, mg, mkk
        
        region b:18-362 [150027]
    5. Mouse (Mus musculus), kif2c [TaxId: 10090] [102370] (2)
      1. 1v8k
        complexed with anp, mg
        
        chain a [100510]
      2. 1v8j
        complexed with adp, mg
        
        chain a [100509]
    6. Neurospora crassa [TaxId: 5141] [69490] (1)
      1. 1goj
        complexed with adp, mg
        
        chain a [65419]
    7. Malaria parasite (Plasmodium falciparum) [TaxId: 5833] [102371] (1)
      1. 1ry6
        complexed with so4
        
        chain a [98090]
  3. Kinesin motor Ncd (non-claret disjunctional) [52649]
    contains coiled-coil neck
    1. Fruit fly (Drosophila melanogaster) [TaxId: 7227] [52650] (3)
      1. 2ncd
        complexed with adp, so4
        
        chain a [32193]
      2. 1n6m
        complexed with adp, mg; mutant
        
        chain a [91688]
        chain b [91689]
      3. 1cz7
        
        chain a [32194]
        chain b [32195]
        chain c [32196]
        chain d [32197]
    2. Baker's yeast (Saccharomyces cerevisiae), Kar [TaxId: 4932] [52651] (5)
      kinesin-like protein
      1. 1f9v
        complexed with adp, mg; mutant
        
        chain a [59745]
      2. 1f9t
        complexed with adp, mg; mutant
        
        chain a [59743]
      3. 1f9u
        complexed with adp, mg; mutant
        
        chain a [59744]
      4. 3kar
        complexed with adp, mg; mutant
        
        chain a [32198]
      5. 1f9w
        complexed with adp, mg; mutant
        
        chain a [59746]
        chain b [59747]
  4. Kinesin heavy chain-like protein [110548]
    1. Potato (Solanum tuberosum) [TaxId: 4113] [110549] (5)
      SQ Q41460 884-1252
      1. 1sdm
        complexed with adp, mg
        
        chain a [105438]
      2. 3cob
        automatically matched to d1sdma_
        complexed with adp, mg
        
        region a:889-1252 [156855]
      3. 3cob
        automatically matched to d1sdma_
        complexed with adp, mg
        
        region c:889-1252 [156856]
      4. 3cnz
        automatically matched to d1sdma_
        complexed with adp, mg
        
        region a:889-1252 [156853]
      5. 3cnz
        automatically matched to d1sdma_
        complexed with adp, mg
        
        region b:889-1252 [156854]
13. Nitrogenase iron protein-like [52652] (29)
  core: parallel beta-sheet of 7 strands; order 3241567
  1. Dethiobiotin synthetase [52653]
    1. Escherichia coli [TaxId: 562] [52654] (13)
      1. 1byi
        
        chain a [32199]
      2. 1dak
        complexed with adp, dpp, mg, po4
        
        chain a [32203]
      3. 1dts
        
        chain a [32200]
      4. 1dai
        complexed with dsd
        
        chain a [32202]
      5. 1dah
        complexed with acp, dnn, mn
        
        chain a [32201]
      6. 1dad
        complexed with adp
        
        chain a [32204]
      7. 1dae
        complexed with ikt
        
        chain a [32205]
      8. 1dag
        complexed with acp, dsd
        
        chain a [32206]
      9. 1daf
        complexed with adp, ca, dsd
        
        chain a [32207]
      10. 1bs1
        complexed with adp, daf, ium
        
        chain a [32208]
      11. 1dbs
        complexed with so4
        
        chain a [32209]
      12. 1dam
        complexed with adp, cyc, ium, pho
        
        chain a [32210]
      13. 1a82
        complexed with atp, dnn, mg
        
        chain a [32211]
  2. Adenylosuccinate synthetase, PurA [52655]
    common fold is interrupted by an all-alpha subdomain, residues 100-200
    1. Escherichia coli [TaxId: 562] [52656] (24)
      1. 1qf5
        
        chain a [32212]
      2. 2gcq
        automatically matched to d1adea_
        complexed with doi, gdp, had, mg
        
        region a:1-431 [134993]
      3. 1qf4
        
        chain a [32215]
      4. 1ade
        
        chain a [32213]
        chain b [32214]
      5. 1cib
        complexed with gdp, hda, imp, mg, no3
        
        chain a [32216]
      6. 1cg3
        complexed with gdp, hda, imo, mg; mutant
        
        chain a [32219]
      7. 1cg1
        complexed with gdp, hda, imo, mg; mutant
        
        chain a [32223]
      8. 1hoo
        complexed with gnh, gnp
        
        chain a [32217]
        chain b [32218]
      9. 1cg0
        complexed with gdp, hda, imo, mg
        
        chain a [32220]
      10. 1ch8
        
        chain a [32226]
      11. 1son
        complexed with amp, bme
        
        chain a [32227]
      12. 1kkf
        complexed with dpo, had, imp, mg
        
        chain a [72644]
      13. 1hon
        complexed with gnh
        
        chain a [32221]
        chain b [32222]
      14. 1soo
        complexed with bme, hnp, na, so4
        
        chain a [32229]
      15. 1hop
        complexed with gcp
        
        chain a [32224]
        chain b [32225]
      16. 1cg4
        complexed with gdp, imo, mg; mutant
        
        chain a [32228]
      17. 1gim
        complexed with gdp, had, imp, mg, no3
        
        chain a [32230]
      18. 1kkb
        complexed with had, imp
        
        chain a [72643]
      19. 1juy
        complexed with gdp, h5p, hda, mg, pi
        
        chain a [32235]
      20. 1adi
        
        chain a [32233]
        chain b [32234]
      21. 1nht
        complexed with gdp, had, mg, spg
        
        chain a [32232]
      22. 1ksz
        complexed with gdp, had, mg, pgs
        
        chain a [32231]
      23. 1kjx
        complexed with imp
        
        chain a [72623]
      24. 1gin
        complexed with gdp, had, imp, mg, no3
        
        chain a [32236]
    2. Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702] [52657] (1)
      1. 1dj2
        complexed with gdp
        
        chain a [32237]
        chain b [32238]
    3. Bread wheat (Triticum aestivum) [TaxId: 4565] [52658] (1)
      1. 1dj3
        complexed with gdp
        
        chain a [32239]
        chain b [32240]
    4. Mouse (Mus musculus) [TaxId: 10090] [69491] (9)
      1. 1iwe
        complexed with act, imp, mg
        
        chain a [71486]
        chain b [71487]
      2. 1lny
        complexed with gdp, imo, mg
        
        chain a [74113]
        chain b [74114]
      3. 1lon
        complexed with gdp, hda, imo, mg
        
        chain a [74153]
      4. 1loo
        complexed with gtp
        
        chain a [74154]
      5. 2dgn
        automatically matched to d1j4ba_
        complexed with doi, gdp, mg
        
        region a:27-457 [131514]
      6. 1mez
        complexed with 2sa, gdp, mg, so4
        
        chain a [79037]
      7. 1j4b
        
        chain a [66374]
      8. 1mf0
        complexed with amp, gdp, mg, pi
        
        chain a [79038]
      9. 1mf1
        complexed with act, amp
        
        chain a [79039]
    5. Malaria parasite (Plasmodium falciparum) [TaxId: 5833] [102372] (1)
      1. 1p9b
        complexed with gdp, hda, imo, mg, no3
        
        chain a [94385]
  3. Formyltetrahydrofolate synthetase [52659]
    modified P-loop; there are many insertions in the common fold
    1. Moorella thermoacetica [TaxId: 1525] [52660] (3)
      1. 1eg7
        complexed with so4
        
        chain a [32241]
        chain b [32242]
      2. 1fpm
        complexed with cs, so4
        
        chain a [59945]
        chain b [59946]
      3. 1fp7
        complexed with k, so4
        
        chain a [59943]
        chain b [59944]
  4. Nitrogenase iron protein [52661]
    1. Azotobacter vinelandii [TaxId: 354] [52662] (19)
      1. 2afh
        automatically matched to d1fp6a_
        complexed with 1pe, ca, cfn, clf, hca, na, p6g, peg, pg4, pge, sf4, trs
        
        region e:1-289 [126683]
      2. 2afh
        automatically matched to d1fp6a_
        complexed with 1pe, ca, cfn, clf, hca, na, p6g, peg, pg4, pge, sf4, trs
        
        region f:1-286 [126684]
      3. 1fp6
        complexed with adp, fs4, mg
        
        chain a [32243]
        chain b [32244]
        chain c [32245]
        chain d [32246]
      4. 1m34
        complexed with adp, alf, ca, cfm, clf, fs4, hca, mg
        
        chain e [78519]
        chain f [78520]
        chain g [78521]
        chain h [78522]
        chain m [78527]
        chain n [78528]
        chain o [78529]
        chain p [78530]
      5. 1g20
        complexed with ca, cfm, clf, fs4, hca
        
        chain e [32247]
        chain f [32248]
        chain g [32249]
        chain h [32250]
      6. 1g5p
        complexed with fs4
        
        chain a [32253]
        chain b [32254]
      7. 2nip
        complexed with fs4
        
        chain a [32251]
        chain b [32252]
      8. 1de0
        
        chain a [32255]
        chain b [32256]
      9. 1g1m
        complexed with fs4
        
        chain a [32257]
        chain b [32258]
      10. 1n2c
        complexed with adp, alf, ca, cfm, clf, fs4, hca, mg
        
        chain e [32259]
        chain f [32260]
        chain g [32261]
        chain h [32262]
      11. 1rw4
        complexed with fs4, gol; mutant
        
        chain a [97962]
      12. 2c8v
        automatically matched to d1rw4a_
        complexed with atp, fs1, mg
        
        region a:1-272 [130128]
      13. 1xcp
        automatically matched to d1de0a_
        complexed with adp, mg, sf4; mutant
        
        region a:1-289 [121856]
      14. 1xcp
        automatically matched to d1de0a_
        complexed with adp, mg, sf4; mutant
        
        region b:1-289 [121857]
      15. 1xcp
        automatically matched to d1de0a_
        complexed with adp, mg, sf4; mutant
        
        region c:1-289 [121858]
      16. 1xcp
        automatically matched to d1de0a_
        complexed with adp, mg, sf4; mutant
        
        region d:1-289 [121859]
      17. 1g21
        complexed with atp, ca, cfm, clf, fs4, hca, mg
        
        chain e [32265]
        chain f [32266]
        chain g [32267]
        chain h [32268]
      18. 1m1y
        chemically crosslinked structure
        complexed with ca, cfm, clf, fs4, hca
        
        chain e [78445]
        chain f [78446]
        chain g [78447]
        chain h [78448]
        chain m [78453]
        chain n [78454]
        chain o [78455]
        chain p [78456]
      19. 1nip
        complexed with adp, fs4, mo4
        
        chain a [32263]
        chain b [32264]
    2. Clostridium pasteurianum [TaxId: 1501] [52663] (1)
      1. 1cp2
        complexed with fs4
        
        chain a [32269]
        chain b [32270]
  5. Cell division regulator MinD [64019]
    1. Archaeon Archaeoglobus fulgidus [TaxId: 2234] [64020] (1)
      1. 1hyq
        
        chain a [61412]
    2. Archaeon Pyrococcus furiosus [TaxId: 2261] [64021] (2)
      1. 1g3q
        complexed with adp, mg
        
        chain a [60237]
      2. 1g3r
        complexed with acp, mg
        
        chain a [60238]
    3. Archaeon Pyrococcus horikoshii [TaxId: 53953] [64022] (1)
      1. 1ion
        complexed with adp, mg
        
        chain a [62633]
  6. GTPase domain of the signal sequence recognition protein Ffh [52664]
    1. Thermus aquaticus [TaxId: 271] [52665] (25)
      1. 1ls1
        complexed with mo5, oxy
        
        region a:89-295 [78171]
      2. 2j45
        automatically matched to d2ffha3
        complexed with ca, edo, mes, mrd, na
        
        region a:89-297 [137984]
      3. 2j45
        automatically matched to d2ffha3
        complexed with ca, edo, mes, mrd, na
        
        region b:89-297 [137986]
      4. 2j46
        automatically matched to d2ffha3
        complexed with act, cl, mn, mrd
        
        region a:89-296 [137988]
      5. 2j46
        automatically matched to d2ffha3
        complexed with act, cl, mn, mrd
        
        region b:89-297 [137990]
      6. 2c04
        automatically matched to d2ffha3
        complexed with ca, gcp
        
        region a:89-297 [129571]
      7. 2c04
        automatically matched to d2ffha3
        complexed with ca, gcp
        
        region b:89-296 [129573]
      8. 2c03
        automatically matched to d2ffha3
        complexed with dio, edo, gdp
        
        region a:89-295 [129567]
      9. 2c03
        automatically matched to d2ffha3
        complexed with dio, edo, gdp
        
        region b:89-295 [129569]
      10. 1okk
        complexed with bzp, edo, gcp, mo3, so4
        
        region a:89-293 [93260]
      11. 1rj9
        complexed with gcp, mg
        
        region b:89-295 [97556]
      12. 1ffh
        complexed with mo5
        
        region a:89-295 [32271]
      13. 2j7p
        automatically matched to d2ffha3
        complexed with edo, gnp, iod, k, mg
        
        region a:89-294 [138120]
      14. 2j7p
        automatically matched to d2ffha3
        complexed with edo, gnp, iod, k, mg
        
        region b:89-294 [138122]
      15. 1jpn
        complexed with acy, gnp, oc3, oc4
        
        region a:89-296 [67040]
        region b:89-295 [67042]
      16. 1ng1
        complexed with acy, cd, edo, gdp, mo4, mo6
        
        region a:89-294 [32272]
      17. 1o87
        complexed with cl, fmt, gdp, mo4, mo5
        
        region a:89-295 [92641]
        region b:89-295 [92643]
      18. 2ng1
        complexed with dox, edo, gdp; mutant
        
        region a:89-294 [32273]
      19. 3ng1
        complexed with cd, edo, so4
        
        region a:89-294 [32274]
        region b:89-294 [32275]
      20. 2cnw
        automatically matched to d2ffha3
        complexed with 5gp, alf, gdp, mg
        
        region a:89-293 [130650]
      21. 2cnw
        automatically matched to d2ffha3
        complexed with 5gp, alf, gdp, mg
        
        region b:89-293 [130652]
      22. 2cnw
        automatically matched to d2ffha3
        complexed with 5gp, alf, gdp, mg
        
        region c:89-293 [130654]
      23. 1jpj
        complexed with gnp
        
        region a:89-294 [67025]
      24. 2ffh
        complexed with cd, so4; mutant
        
        region a:89-307 [32276]
        region b:89-307 [32277]
        region c:89-307 [32278]
      25. 2iy3
        automatically matched to d2ffha3
        
        region a:89-305 [137791]
    2. Archaeon Acidianus ambivalens [TaxId: 2283] [64023] (2)
      1. 1j8y
        mutant
        
        region f:87-297 [62748]
      2. 1j8m
        
        region f:87-297 [62743]
    3. Archaeon Sulfolobus solfataricus [TaxId: 2287] [102373] (2)
      1. 1qzx
        
        region a:88-294 [96713]
        region b:88-294 [96716]
      2. 1qzw
        complexed with ccc, gtp
        
        region a:88-294 [96701]
        region c:88-294 [96704]
        region e:88-294 [96707]
        region g:88-294 [96710]
  7. GTPase domain of the signal recognition particle receptor FtsY [52666]
    1. Escherichia coli [TaxId: 562] [52667] (2)
      1. 2qy9
        automatically matched to d1ftsa2
        
        region a:285-495 [151470]
      2. 1fts
        
        region a:285-495 [32279]
    2. Thermus aquaticus [TaxId: 271] [102374] (8)
      1. 1okk
        complexed with bzp, edo, gcp, mo3, so4
        
        region d:97-303 [93262]
      2. 1rj9
        complexed with gcp, mg
        
        region a:96-303 [97554]
      3. 2j7p
        automatically matched to d1okkd2
        complexed with edo, gnp, iod, k, mg
        
        region d:97-303 [138124]
      4. 2j7p
        automatically matched to d1okkd2
        complexed with edo, gnp, iod, k, mg
        
        region e:97-303 [138126]
      5. 2iyl
        automatically matched to d1okkd2
        complexed with gdp, so4
        
        region d:97-303 [137802]
      6. 2cnw
        automatically matched to d1okkd2
        complexed with 5gp, alf, gdp, mg
        
        region d:97-303 [130656]
      7. 2cnw
        automatically matched to d1okkd2
        complexed with 5gp, alf, gdp, mg
        
        region e:97-303 [130658]
      8. 2cnw
        automatically matched to d1okkd2
        complexed with 5gp, alf, gdp, mg
        
        region f:97-303 [130660]
    3. Thermotoga maritima [TaxId: 2336] [110550] (1)
      SQ Q9WZ40
      1. 1vma
        Structural genomics target
        complexed with cit, mg
        
        region a:82-294 [108888]
        region b:82-294 [108890]
  8. Arsenite-translocating ATPase ArsA [52668]
    Duplication: consists of two domains of this fold arranged as the NIP subunits in the dimer
    1. Escherichia coli [TaxId: 562] [52669] (4)
      1. 1ihu
        complexed with adp, af3, cd, cl, mg, tas
        
        region a:1-296 [62394]
        region a:308-586 [62395]
      2. 1f48
        complexed with adp, cd, cl, mg, sb, sbo
        
        region a:1-296 [32280]
        region a:309-586 [32281]
      3. 1ii0
        complexed with adp, atp, cd, cl, mg, tas
        
        region a:1-296 [62396]
        region a:309-589 [62397]
        region b:1001-1296 [62398]
        region b:1307-1589 [62399]
      4. 1ii9
        complexed with adp, anp, cd, cl, mg, tas
        
        region a:1-295 [62418]
        region a:309-589 [62419]
        region b:1001-1295 [62420]
        region b:1307-1589 [62421]
  9. Hypothetical protein YjiA, N-terminal domain [89671]
    homologue of the cobalamin biosynthesis protein CobW
    1. Escherichia coli [TaxId: 562] [89672] (1)
      1. 1nij
        CASP5
        structural genomics
        
        region a:2-223 [85741]
  10. Molybdopterin-guanine dinucleotide biosynthesis protein MobB [89673]
    forms segment-swapped dimer
    1. Escherichia coli [TaxId: 562] [89674] (2)
      1. 1np6
        complexed with so4
        
        chain a [85954]
        chain b [85955]
      2. 1p9n
        complexed with mse, so4
        
        chain a [87997]
        chain b [87998]
    2. Bacillus stearothermophilus [TaxId: 1422] [117539] (1)
      SQ Q5L1X2 # 91% sequence identity
      1. 1xjc
        
        chain a [115387]
  11. CTP synthase PyrG, N-terminal domain [110551]
    1. Escherichia coli [TaxId: 562] [110552] (1)
      SQ P08398
      1. 1s1m
        complexed with iod, mg, mpd, so4
        
        region a:1-266 [105202]
        region b:1-266 [105204]
    2. Thermus thermophilus [TaxId: 274] [110553] (3)
      SQ Q5SIA8
      1. 1vco
        complexed with gln
        
        region a:11-282 [108509]
      2. 1vcm
        
        region a:11-282 [108505]
      3. 1vcn
        complexed with so4
        
        region a:11-282 [108507]
    3. Human (Homo sapiens) [TaxId: 9606] [159561] (2)
      SQ Q5VW67 1-273
      1. 2vo1
        complexed with so4
        
        region a:1-273 [153348]
      2. 2vo1
        automatically matched to 2VO1 A:1-273
        complexed with so4
        
        region b:1-273 [153349]
  12. ATP(GTP)-binding protein PAB0955 [142297]
    PYRAB14380; belongs to Pfam 03029
    1. Pyrococcus abyssi [TaxId: 29292] [142298] (9)
      SQ Q9UYR9 30-273
      1. 1yrb
        automatically matched to 1YR6 A:1-244
        complexed with gdp, mg
        
        region a:1-244 [123915]
      2. 1yrb
        automatically matched to 1YR6 A:1-244
        complexed with gdp, mg
        
        region b:1-244 [123916]
      3. 1yra
        automatically matched to 1YR6 A:1-244
        complexed with gdp
        
        region a:1-244 [123913]
      4. 1yra
        automatically matched to 1YR6 A:1-244
        complexed with gdp
        
        region b:1-244 [123914]
      5. 1yr7
        automatically matched to 1YR6 A:1-244
        complexed with gsp
        
        region a:1-242 [123910]
      6. 1yr6
        
        region a:1-244 [123909]
      7. 2oxr
        automatically matched to 1YR6 A:1-244
        complexed with gdp, mg
        
        region a:1-243 [139423]
      8. 1yr8
        automatically matched to 1YR6 A:1-244
        complexed with gtp
        
        region a:1-244 [123911]
      9. 1yr9
        automatically matched to 1YR6 A:1-244
        complexed with gdp, po4
        
        region a:1-244 [123912]
  13. Hypothetical protein TM0796 [142299]
    member of Pfam 07755; DUF1611; contains extra N-terminal alpha/beta fold of Rossmann-fold topology, parallel beta-sheet, strand order 312456
    1. Thermotoga maritima [TaxId: 2336] [142300] (2)
      SQ Q9WZQ3 1-338
      1. 2g0t
        complexed with edo, fmt, po4
        
        region a:1-338 [134499]
      2. 2g0t
        automatically matched to 2G0T A:1-338
        complexed with edo, fmt, po4
        
        region b:1-338 [134500]
  14. LAO/AO transport system kinase ArgK [159562]
    member of Pfam 03308; contains extra N-terminal 3-helical bundle and extra C-terminal helical dimerisation domain
    1. Escherichia coli [TaxId: 562] [159563] (1)
      SQ P27254 1-327
      1. 2p67
        complexed with cl, na
        
        region a:1-327 [149269]
  15. Metallochaperone MeaB [159564]
    ArgK-like (sub)family; Pfam 03308
    1. Methylobacterium extorquens [TaxId: 408] [159565] (4)
      SQ Q8RPA0 5-327
      1. 2qm8
        automatically matched to 2QM7 A:5-327
        complexed with po4; mutant
        
        region a:5-327 [150874]
      2. 2qm8
        automatically matched to 2QM7 A:5-327
        complexed with po4; mutant
        
        region b:6-327 [150875]
      3. 2qm7
        complexed with gdp, po4; mutant
        
        region a:5-327 [150872]
      4. 2qm7
        automatically matched to 2QM7 A:5-327
        complexed with gdp, po4; mutant
        
        region b:6-327 [150873]
14. RecA protein-like (ATPase-domain) [52670] (29)
  core: mixed beta-sheet of 8 strands, order 32451678; strand 7 is antiparallel to the rest
  1. RecA protein, ATPase-domain [52671]
    C-terminal domain is alpha+beta
    1. Escherichia coli [TaxId: 562] [52672] (7)
      SQ P0A7G6 P03017
      1. 1u94
        complexed with ca
        
        region a:6-268 [107743]
      2. 1xmv
        complexed with adp, mg
        
        region a:3-268 [115564]
      3. 1u98
        complexed with gol, so4
        
        region a:6-268 [107745]
      4. 1xms
        complexed with anp, mn
        
        region a:3-268 [115559]
      5. 2reb
        
        region a:3-268 [32282]
      6. 1u99
        complexed with po4
        
        region a:6-268 [107747]
      7. 1rea
        complexed with adp
        
        region a:3-268 [32283]
    2. Mycobacterium tuberculosis [TaxId: 1773] [52673] (6)
      1. 1mo6
        complexed with dtp
        
        region a:1-269 [79339]
      2. 1mo3
        complexed with adp
        
        region a:1-269 [79333]
      3. 1g19
        complexed with po4
        
        region a:1-269 [32284]
      4. 1mo5
        complexed with sap
        
        region a:1-269 [79337]
      5. 1mo4
        complexed with sap
        
        region a:1-269 [79335]
      6. 1g18
        complexed with adp, alf
        
        region a:3-269 [32285]
    3. Mycobacterium smegmatis [TaxId: 1772] [89675] (4)
      1. 1ube
        complexed with adp
        
        region a:5-270 [88412]
      2. 1ubf
        complexed with sap
        
        region a:4-270 [88414]
      3. 1ubg
        complexed with dtp
        
        region a:1-270 [88416]
      4. 1ubc
        
        region a:5-270 [88410]
    4. Deinococcus radiodurans [TaxId: 1299] [117540] (1)
      SQ P42443 15-341
      1. 1xp8
        complexed with sap
        
        region a:15-282 [115735]
  2. Gene 4 protein (g4p, DNA primase), helicase domain [52674]
    1. Bacteriophage T7 [TaxId: 10760] [52675] (7)
      1. 1cr2
        
        chain a [32288]
      2. 1cr1
        
        chain a [32286]
      3. 1cr0
        
        chain a [32287]
      4. 1cr4
        
        chain a [32289]
      5. 1e0j
        complexed with anp, mg
        
        chain a [32290]
        chain b [32291]
        chain c [32292]
        chain d [32293]
        chain e [32294]
        chain f [32295]
      6. 1e0k
        
        chain a [32296]
        chain b [32297]
        chain c [32298]
        chain d [32299]
        chain e [32300]
        chain f [32301]
      7. 1q57
        mutant
        
        region a:264-549 [95867]
        region b:264-549 [95869]
        region c:264-549 [95871]
        region d:264-549 [95873]
        region e:264-549 [95875]
        region f:264-549 [95877]
        region g:264-549 [95879]
  3. Hexameric replicative helicase repA [52676]
    1. Escherichia coli [TaxId: 562] [52677] (3)
      1. 1nlf
        complexed with so4
        
        chain a [85850]
        chain b [85851]
        chain c [85852]
      2. 1olo
        complexed with so4
        
        chain a [93318]
        chain b [93319]
      3. 1g8y
        
        chain a [32302]
        chain b [32303]
        chain c [32304]
        chain d [32305]
        chain e [32306]
        chain f [32307]
        chain g [32308]
        chain h [32309]
        chain i [32310]
        chain j [32311]
        chain k [32312]
        chain l [32313]
  4. Bacterial conjugative coupling protein TrwB [69492]
    1. Escherichia coli [TaxId: 562] [69493] (5)
      1. 1e9r
        complexed with so4; mutant
        
        chain a [64827]
        chain b [64828]
        chain d [64829]
        chain e [64830]
        chain f [64831]
        chain g [64832]
      2. 1e9s
        mutant
        
        chain a [64833]
        chain b [64834]
        chain d [64835]
        chain e [64836]
        chain f [64837]
        chain g [64838]
        chain h [64839]
        chain i [64840]
        chain j [64841]
        chain k [64842]
        chain l [64843]
        chain m [64844]
      3. 1gl6
        complexed with cl, epe, gnp; mutant
        
        chain a [70259]
        chain b [70260]
        chain d [70261]
        chain e [70262]
        chain f [70263]
        chain g [70264]
      4. 1gki
        complexed with adp, epe, mg; mutant
        
        chain a [70221]
        chain b [70222]
        chain d [70223]
        chain e [70224]
        chain f [70225]
        chain g [70226]
      5. 1gl7
        complexed with anp, cl; mutant
        
        chain a [70265]
        chain b [70266]
        chain d [70267]
        chain e [70268]
        chain f [70269]
        chain g [70270]
  5. Hexameric traffic ATPase, HP0525 [52719]
    type II/IV secretion system protein; includes N-terminal alpha+beta domain of a profilin-like topology
    1. Helicobacter pylori [TaxId: 210] [52720] (6)
      1. 1g6o
        structural genomics
        complexed with adp, peg
        
        chain a [32430]
        chain b [32431]
      2. 2pt7
        automatically matched to d1g6oa_
        
        region a:6-328 [149834]
      3. 2pt7
        automatically matched to d1g6oa_
        
        region d:6-328 [149835]
      4. 1nly
        complexed with 2pe, atg, mg, mse, so4
        
        chain a [85858]
        chain b [85859]
      5. 1opx
        complexed with 2pe, mse, so4
        
        chain a [87243]
        chain b [87244]
      6. 1nlz
        complexed with mse
        
        chain a [85860]
        chain b [85861]
        chain c [85862]
        chain d [85863]
        chain e [85864]
        chain f [85865]
  6. Extracellular secretion NTPase EpsE [102375]
    type II/IV secretion system protein; overall structure is similar to HP0525
    1. Vibrio cholerae [TaxId: 666] [102376] (2)
      1. 1p9r
        complexed with cl, zn
        
        chain a [94399]
      2. 1p9w
        complexed with anp, zn
        
        chain a [94400]
  7. DNA repair protein Rad51, catalytic domain [82412]
    1. Human (Homo sapiens) [TaxId: 9606] [82413] (1)
      1. 1n0w
        complex with BRCA2 BRC4 repeat peptide
        complexed with cl, edo, mg, mse
        
        chain a [79772]
    2. Archaeon Pyrococcus furiosus [TaxId: 2261] [102377] (1)
      1. 1pzn
        complexed with gol, imd, mpd, so4
        
        region a:96-349 [95457]
        region b:96-349 [95458]
        region c:96-349 [95459]
        region d:96-349 [95460]
        region e:96-349 [95461]
        region f:96-349 [95462]
        region g:96-349 [95463]
    3. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [110554] (1)
      SQ P25454 81-395
      1. 1szp
        complexed with so4
        
        region a:145-395 [106177]
        region b:145-395 [106179]
        region c:145-395 [106181]
        region d:145-395 [106183]
        region e:145-395 [106185]
        region f:145-395 [106187]
    4. Archaeon Methanococcus voltae [TaxId: 2188] [110555] (8)
      SQ O73948
      1. 2i1q
        automatically matched to d1t4ga2
        complexed with anp, ca, mg, na; mutant
        
        region a:65-322 [136985]
      2. 1t4g
        complexed with anp, mg; mutant
        
        region a:65-322 [106419]
      3. 2f1j
        automatically matched to d1t4ga2
        complexed with adp, mg; mutant
        
        region a:65-322 [132771]
      4. 2b21
        automatically matched to d1t4ga2
        complexed with anp, k, mg; mutant
        
        region a:65-322 [127688]
      5. 1xu4
        complexed with anp, k, mg; mutant
        
        region a:65-322 [116046]
      6. 2gdj
        automatically matched to d1t4ga2
        complexed with anp, mg
        
        region a:65-322 [135018]
      7. 2f1i
        automatically matched to d1t4ga2
        complexed with anp, mg; mutant
        
        region a:65-322 [132769]
      8. 2f1h
        automatically matched to d1t4ga2
        complexed with anp, k, mg; mutant
        
        region a:65-322 [132767]
  8. Central domain of alpha subunit of F1 ATP synthase [88774]
    1. Cow (Bos taurus) [TaxId: 9913] [88775] (18)
      SQ P19483
      1. 2jdi
        automatically matched to d1bmfa3
        complexed with anp, mg
        
        region a:95-379 [145685]
      2. 2jdi
        automatically matched to d1bmfa3
        complexed with anp, mg
        
        region b:95-379 [145688]
      3. 2jdi
        automatically matched to d1bmfa3
        complexed with anp, mg
        
        region c:95-379 [145691]
      4. 2ck3
        automatically matched to d1bmfa3
        complexed with adp, anp, azi, mg, po4
        
        region a:95-379 [145035]
      5. 2ck3
        automatically matched to d1bmfa3
        complexed with adp, anp, azi, mg, po4
        
        region b:95-379 [145038]
      6. 2ck3
        automatically matched to d1bmfa3
        complexed with adp, anp, azi, mg, po4
        
        region c:95-379 [145041]
      7. 1w0j
        complexed with adp, bef, gol, mo3, mo4, po4
        
        region a:95-379 [108991]
        region b:95-379 [108994]
        region c:95-379 [108997]
      8. 1e79
        complexed with adp, atp, cry, glh, mg, so4
        
        region a:95-379 [32314]
        region b:95-379 [32315]
        region c:95-379 [32316]
      9. 1w0k
        complexed with adp, gol, mg, po4
        
        region a:95-379 [109010]
        region b:95-379 [109013]
        region c:95-379 [109016]
      10. 1h8e
        complexed with adp, alf, gol, mg, so4
        
        region a:95-379 [60740]
        region b:95-379 [60743]
        region c:95-379 [60746]
      11. 1nbm
        complexed with adp, atp, mg, po4, tyn
        
        region a:95-379 [32332]
        region b:95-379 [32333]
        region c:95-379 [32334]
      12. 1e1r
        complexed with adp, af3, anp, mg, po4
        
        region a:95-379 [32320]
        region b:95-379 [32321]
        region c:95-379 [32322]
      13. 1bmf
        complexed with adp, anp, mg
        
        region a:95-379 [32326]
        region b:95-379 [32327]
        region c:95-379 [32328]
      14. 1e1q
        complexed with adp, anp, mg, po4
        
        region a:95-379 [32338]
        region b:95-379 [32339]
        region c:95-379 [32340]
      15. 1efr
        complexed with adp, anp, app, bal, cpi, mg, tlx
        
        region a:95-379 [32344]
        region b:95-379 [32345]
        region c:95-379 [32346]
      16. 1ohh
        complexed with anp, mg
        
        region a:95-379 [87017]
        region b:95-379 [87020]
        region c:95-379 [87023]
      17. 1h8h
        complexed with adp, atp, gol, mg, po4
        
        region a:95-379 [60761]
        region b:95-379 [60764]
        region c:95-379 [60767]
      18. 1cow
        complexed with adp, anp, aur, mg
        
        region a:95-379 [32350]
        region b:95-379 [32351]
        region c:95-379 [32352]
    2. Rat (Rattus norvegicus) [TaxId: 10116] [88776] (2)
      1. 1mab
        complexed with adp, atp, mg, po4
        
        region a:95-379 [32356]
      2. 2f43
        automatically matched to d1maba3
        complexed with adp, atp, mg, vo4
        
        region a:95-379 [145133]
    3. Bacillus sp., strain ps3 [TaxId: 1409] [88777] (1)
      1. 1sky
        complexed with so4
        
        region b:96-371 [32358]
    4. Spinach (Spinacia oleracea), chloroplast [TaxId: 3562] [88778] (2)
      1. 1fx0
        
        region a:97-372 [60082]
      2. 1kmh
        complexed with ttx
        
        region a:97-372 [72747]
  9. Central domain of beta subunit of F1 ATP synthase [88779]
    1. Cow (Bos taurus) [TaxId: 9913] [88780] (12)
      SQ P00829
      1. 1w0j
        complexed with adp, bef, gol, mo3, mo4, po4
        
        region d:82-357 [109000]
        region e:82-357 [109003]
        region f:82-357 [109006]
      2. 1e79
        complexed with adp, atp, cry, glh, mg, so4
        
        region d:82-357 [32317]
        region e:82-357 [32318]
        region f:82-357 [32319]
      3. 1w0k
        complexed with adp, gol, mg, po4
        
        region d:82-357 [109019]
        region e:82-357 [109022]
        region f:82-357 [109025]
      4. 1h8e
        complexed with adp, alf, gol, mg, so4
        
        region d:82-357 [60749]
        region e:82-357 [60752]
        region f:82-357 [60755]
      5. 1nbm
        complexed with adp, atp, mg, po4, tyn
        
        region d:82-357 [32335]
        region e:82-357 [32336]
        region f:82-357 [32337]
      6. 1e1r
        complexed with adp, af3, anp, mg, po4
        
        region d:82-357 [32323]
        region e:82-357 [32324]
        region f:82-357 [32325]
      7. 1bmf
        complexed with adp, anp, mg
        
        region d:82-357 [32329]
        region e:82-357 [32330]
        region f:82-357 [32331]
      8. 1e1q
        complexed with adp, anp, mg, po4
        
        region d:82-357 [32341]
        region e:82-357 [32342]
        region f:82-357 [32343]
      9. 1efr
        complexed with adp, anp, app, bal, cpi, mg, tlx
        
        region d:82-357 [32347]
        region e:82-357 [32348]
        region f:82-357 [32349]
      10. 1ohh
        complexed with anp, mg
        
        region d:82-357 [87026]
        region e:82-357 [87029]
        region f:82-357 [87032]
      11. 1h8h
        complexed with adp, atp, gol, mg, po4
        
        region d:82-357 [60770]
        region e:82-357 [60773]
        region f:82-357 [60776]
      12. 1cow
        complexed with adp, anp, aur, mg
        
        region d:82-357 [32353]
        region e:82-357 [32354]
        region f:82-357 [32355]
    2. Rat (Rattus norvegicus) [TaxId: 10116] [88781] (8)
      1. 2jdi
        automatically matched to d1mabb3
        complexed with anp, mg
        
        region d:82-357 [138265]
      2. 2jdi
        automatically matched to d1mabb3
        complexed with anp, mg
        
        region e:82-357 [138268]
      3. 2jdi
        automatically matched to d1mabb3
        complexed with anp, mg
        
        region f:82-357 [138271]
      4. 2ck3
        automatically matched to d1mabb3
        complexed with adp, anp, azi, mg, po4
        
        region d:82-357 [130555]
      5. 2ck3
        automatically matched to d1mabb3
        complexed with adp, anp, azi, mg, po4
        
        region e:82-357 [130558]
      6. 2ck3
        automatically matched to d1mabb3
        complexed with adp, anp, azi, mg, po4
        
        region f:82-357 [130561]
      7. 1mab
        complexed with adp, atp, mg, po4
        
        region b:82-357 [32357]
      8. 2f43
        automatically matched to d1mabb3
        complexed with adp, atp, mg, vo4
        
        region b:82-357 [132910]
    3. Bacillus sp., strain ps3 [TaxId: 1409] [88782] (1)
      1. 1sky
        complexed with so4
        
        region e:83-356 [32359]
    4. Spinach (Spinacia oleracea), chloroplast [TaxId: 3562] [88783] (2)
      1. 1fx0
        
        region b:98-377 [60085]
      2. 1kmh
        complexed with ttx
        
        region b:98-377 [72750]
  10. Transcription termination factor Rho, ATPase domain [89676]
    1. Escherichia coli [TaxId: 562] [89677] (10)
      SQ P03002
      1. 1xpu
        complexed with ags, fpd, mg
        
        region a:129-417 [115792]
        region b:129-417 [115795]
        region c:129-417 [115798]
        region d:129-417 [115801]
        region e:129-417 [115804]
        region f:129-417 [115807]
      2. 1xpr
        complexed with ags, fb, mg
        
        region a:129-417 [115774]
        region b:129-417 [115777]
        region c:129-417 [115780]
        region d:129-417 [115783]
        region e:129-417 [115786]
        region f:129-417 [115789]
      3. 1pvo
        complexed with anp
        
        region a:129-417 [88318]
        region b:129-417 [88320]
        region c:129-417 [88323]
        region d:129-417 [88326]
        region e:129-417 [88329]
        region f:129-417 [88332]
      4. 1pv4
        complexed with mse
        
        region a:129-417 [88297]
        region b:129-417 [88299]
        region c:129-417 [88302]
        region d:129-417 [88305]
        region e:129-417 [88308]
        region f:129-417 [88311]
      5. 1xpo
        automatically matched to d1pv4a3
        complexed with ags, bcm, mg
        
        region a:130-417 [122214]
      6. 1xpo
        automatically matched to d1pv4a3
        complexed with ags, bcm, mg
        
        region b:130-417 [122217]
      7. 1xpo
        automatically matched to d1pv4a3
        complexed with ags, bcm, mg
        
        region c:130-417 [122220]
      8. 1xpo
        automatically matched to d1pv4a3
        complexed with ags, bcm, mg
        
        region d:130-417 [122223]
      9. 1xpo
        automatically matched to d1pv4a3
        complexed with ags, bcm, mg
        
        region e:130-417 [122226]
      10. 1xpo
        automatically matched to d1pv4a3
        complexed with ags, bcm, mg
        
        region f:130-417 [122229]
  11. Adenosylcobinamide kinase/adenosylcobinamide phosphate guanylyltransferase CobU [52682]
    lacks the last strand 8
    1. Salmonella typhimurium [TaxId: 90371] [52683] (2)
      1. 1c9k
        complexed with 5gp, mg, po4, pop
        
        chain a [32363]
        chain b [32364]
        chain c [32365]
      2. 1cbu
        complexed with so4
        
        chain a [32360]
        chain b [32361]
        chain c [32362]
  12. ATP:corrinoid adenosyltransferase CobA [52684]
    lacks the two last strands
    1. Salmonella typhimurium [TaxId: 90371] [52685] (3)
      1. 1g5t
        complexed with atp, mg
        
        chain a [32366]
      2. 1g5r
        complexed with cl
        
        chain a [32367]
      3. 1g64
        complexed with atp, b12, mg
        
        chain a [32368]
        chain b [32369]
  13. Meiotic recombination protein DMC1/LIM15 homolog [110556]
    1. Human (Homo sapiens) [TaxId: 9606] [110557] (1)
      SQ Q14565
      1. 1v5w
        
        chain a [108387]
        chain b [108388]
  14. Circadian clock protein KaiC [110558]
    duplication: contains two copies of this domain
    1. Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140] [110559] (25)
      SQ Q79PF4 14-497
      1. 1tf7
        complexed with atp
        
        region a:14-255 [106838]
        region a:256-497 [106839]
        region b:14-255 [106840]
        region b:256-497 [106841]
        region c:14-255 [106842]
        region c:256-497 [106843]
        region d:14-255 [106844]
        region d:256-497 [106845]
        region e:14-255 [106846]
        region e:256-497 [106847]
        region f:14-255 [106848]
        region f:256-497 [106849]
      2. 1u9i
        automatically matched to d1tf7a1
        complexed with atp, mg; mutant
        
        region a:14-255 [119637]
      3. 1u9i
        automatically matched to d1tf7a2
        complexed with atp, mg; mutant
        
        region a:256-497 [119638]
      4. 1u9i
        automatically matched to d1tf7a1
        complexed with atp, mg; mutant
        
        region b:14-255 [119639]
      5. 1u9i
        automatically matched to d1tf7a2
        complexed with atp, mg; mutant
        
        region b:256-497 [119640]
      6. 1u9i
        automatically matched to d1tf7a1
        complexed with atp, mg; mutant
        
        region c:14-255 [119641]
      7. 1u9i
        automatically matched to d1tf7a2
        complexed with atp, mg; mutant
        
        region c:256-497 [119642]
      8. 1u9i
        automatically matched to d1tf7a1
        complexed with atp, mg; mutant
        
        region d:14-255 [119643]
      9. 1u9i
        automatically matched to d1tf7a2
        complexed with atp, mg; mutant
        
        region d:256-497 [119644]
      10. 1u9i
        automatically matched to d1tf7a1
        complexed with atp, mg; mutant
        
        region e:14-255 [119645]
      11. 1u9i
        automatically matched to d1tf7a2
        complexed with atp, mg; mutant
        
        region e:256-497 [119646]
      12. 1u9i
        automatically matched to d1tf7a1
        complexed with atp, mg; mutant
        
        region f:14-255 [119647]
      13. 1u9i
        automatically matched to d1tf7a2
        complexed with atp, mg; mutant
        
        region f:256-497 [119648]
      14. 2gbl
        automatically matched to d1tf7a1
        complexed with atp, mg
        
        region a:14-255 [134911]
      15. 2gbl
        automatically matched to d1tf7a2
        complexed with atp, mg
        
        region a:256-497 [134912]
      16. 2gbl
        automatically matched to d1tf7a1
        complexed with atp, mg
        
        region b:14-255 [134913]
      17. 2gbl
        automatically matched to d1tf7a2
        complexed with atp, mg
        
        region b:256-497 [134914]
      18. 2gbl
        automatically matched to d1tf7a1
        complexed with atp, mg
        
        region c:14-255 [134915]
      19. 2gbl
        automatically matched to d1tf7a2
        complexed with atp, mg
        
        region c:256-497 [134916]
      20. 2gbl
        automatically matched to d1tf7a1
        complexed with atp, mg
        
        region d:14-255 [134917]
      21. 2gbl
        automatically matched to d1tf7a2
        complexed with atp, mg
        
        region d:256-497 [134918]
      22. 2gbl
        automatically matched to d1tf7a1
        complexed with atp, mg
        
        region e:14-255 [134919]
      23. 2gbl
        automatically matched to d1tf7a2
        complexed with atp, mg
        
        region e:256-497 [134920]
      24. 2gbl
        automatically matched to d1tf7a1
        complexed with atp, mg
        
        region f:14-255 [134921]
      25. 2gbl
        automatically matched to d1tf7a2
        complexed with atp, mg
        
        region f:256-497 [134922]
  15. NTPase P4 [117541]
    contains extra N-terminal subdomain (~100 residues): [contains pseudo beta-barrel]
    1. Bacteriophage phi-12 [TaxId: 161736] [117542] (8)
      SQ Q94M05
      1. 1w44
        complexed with adp
        
        chain a [114147]
        chain b [114148]
        chain c [114149]
      2. 1w48
        complexed with apc
        
        chain a [114156]
        chain b [114157]
        chain c [114158]
      3. 1w49
        complexed with apc, mg
        
        chain a [114159]
        chain b [114160]
        chain c [114161]
      4. 1w4b
        complexed with adp, mg
        
        chain a [114165]
        chain b [114166]
        chain c [114167]
      5. 1w4a
        complexed with apc, mn
        
        chain a [114162]
        chain b [114163]
        chain c [114164]
      6. 1w47
        complexed with adp, mn
        
        chain a [114153]
        chain b [114154]
        chain c [114155]
      7. 1w4c
        
        chain a [114168]
        chain b [114169]
        chain c [114170]
        chain d [114171]
        chain e [114172]
        chain f [114173]
        chain g [114174]
        chain h [114175]
        chain i [114176]
        chain j [114177]
        chain k [114178]
        chain l [114179]
        chain m [114180]
        chain n [114181]
        chain o [114182]
        chain p [114183]
        chain q [114184]
        chain r [114185]
        chain s [114186]
        chain t [114187]
        chain u [114188]
        chain v [114189]
        chain w [114190]
        chain x [114191]
      8. 1w46
        complexed with adp, mg
        
        chain a [114150]
        chain b [114151]
        chain c [114152]
  16. Hypothetical kinase-like protein Aq_1292 [142301]
    member of Pfam 03266 (DUF265)
    1. Aquifex aeolicus [TaxId: 63363] [142302] (1)
      SQ O67322 1-178
      1. 1ye8
        complexed with mg, na, po4; mutant
        
        region a:1-178 [123010]
  17. Cancer-related NTPase, C1orf57 [159566]
    member of Pfam 03266; DUF265
    1. Human (Homo sapiens) [TaxId: 9606] [159567] (1)
      SQ Q5TDE9 2-190
      1. 2i3b
        
        region a:1-189 [147497]
15. Bacterial cell division inhibitor SulA [89678] (1)
  homologous to RecA but lacks its P-loop motif; the fold is C-terminally truncated; 5-stranded parallel beta-sheet, order: 15423
  1. Hypothetical protein PA3008 [89679]
    1. Pseudomonas aeruginosa [TaxId: 287] [89680] (2)
      1. 1ofu
        complexed with FtsZ
        complexed with gdp
        
        chain x [86976]
        chain y [86977]
      2. 1oft
        
        chain a [86968]
        chain b [86969]
        chain c [86970]
        chain d [86971]
16. ABC transporter ATPase domain-like [52686] (29)
  there are two additional subdomains inserted into the central core that has a RecA-like topology
  1. ATP-binding subunit of the histidine permease [52687]
    1. Salmonella typhimurium [TaxId: 90371] [52688] (1)
      1. 1b0u
        
        chain a [32370]
  2. Branched chain aminoacid ABC transporter [75207]
    1. Thermotoga maritima, TM1139 [TaxId: 2336] [75208] (1)
      1. 1ji0
        complexed with atp, mse
        
        chain a [71665]
  3. MJ1267 [64025]
    1. Archaeon Methanococcus jannaschii [TaxId: 2190] [64026] (3)
      1. 1g6h
        complexed with adp, hgc, mg
        
        chain a [60318]
      2. 1gaj
        complexed with cl, peg, so4, tbu
        
        chain a [60416]
      3. 1g9x
        complexed with adp, hgc, mg; mutant
        
        chain a [76219]
        chain b [76220]
        chain c [76221]
  4. MJ0796 [64027]
    1. Archaeon Methanococcus jannaschii [TaxId: 2190] [64028] (2)
      1. 1l2t
        complexed with atp, ioh, na; mutant
        
        chain a [73514]
        chain b [73515]
      2. 1f3o
        complexed with adp, mg
        
        chain a [59631]
  5. Cystic fibrosis transmembrane conductance regulator, CFTR, nucleotide-binding domain [102378]
    1. Mouse (Mus musculus) [TaxId: 10090] [102379] (8)
      SQ P26361 390-670
      1. 1r0w
        complexed with acy
        
        chain a [96754]
        chain b [96755]
        chain c [96756]
        chain d [96757]
      2. 1r0x
        complexed with acy, atp, mg
        
        chain a [96758]
        chain b [96759]
        chain c [96760]
        chain d [96761]
      3. 1r0z
        complexed with acy, atp, mg
        
        chain a [96766]
        chain b [96767]
        chain c [96768]
        chain d [96769]
      4. 1q3h
        complexed with acy, anp, mg
        
        chain a [95688]
        chain b [95689]
        chain c [95690]
        chain d [95691]
      5. 1xf9
        complexed with acy, atp, mg; mutant
        
        chain a [115245]
        chain b [115246]
        chain c [115247]
        chain d [115248]
      6. 1r0y
        complexed with acy, adp
        
        chain a [96762]
        chain b [96763]
        chain c [96764]
        chain d [96765]
      7. 1xfa
        complexed with acy, atp, cl, mg; mutant
        
        chain a [115249]
        chain b [115250]
      8. 1r10
        complexed with acy, atp, mg
        
        chain a [96770]
        chain b [96771]
    2. Human (Homo sapiens) [TaxId: 9606] [117543] (2)
      SQ P13569 389-671
      1. 1xmi
        complexed with atp, mg; mutant
        
        chain a [115489]
        chain b [115490]
        chain c [115491]
        chain d [115492]
        chain e [115493]
      2. 1xmj
        complexed with atp, mg; mutant
        
        chain a [115494]
  6. Peptide transporter Tap1, C-terminal ABC domain [64029]
    1. Human (Homo sapiens) [TaxId: 9606] [64030] (1)
      1. 1jj7
        complexed with adp, mg
        
        chain a [63114]
  7. Maltose transport protein MalK, N-terminal domain [52689]
    1. Archaeon Thermococcus litoralis [TaxId: 2265] [52690] (1)
      1. 1g29
        CASP4
        complexed with cl, dox, mg, na, nh4, pop
        
        region 1:1-240 [32371]
        region 2:1-240 [32372]
    2. Escherichia coli [TaxId: 562] [102380] (13)
      1. 2awn
        automatically matched to d1q12a2
        complexed with adp, mg
        
        region a:4-235 [127460]
      2. 2awn
        automatically matched to d1q12a2
        complexed with adp, mg
        
        region b:4-235 [127462]
      3. 2awn
        automatically matched to d1q12a2
        complexed with adp, mg
        
        region c:4-235 [127464]
      4. 2awn
        automatically matched to d1q12a2
        complexed with adp, mg
        
        region d:4-235 [127466]
      5. 1q12
        complexed with atp
        
        region a:4-235 [95530]
        region b:4-235 [95532]
        region c:4-235 [95534]
        region d:4-235 [95536]
      6. 2r6g
        automatically matched to d1q12a2
        complexed with atp, mal; mutant
        
        region a:4-235 [151605]
      7. 2r6g
        automatically matched to d1q12a2
        complexed with atp, mal; mutant
        
        region b:4-235 [151607]
      8. 2awo
        automatically matched to d1q12a2
        complexed with adp, mg
        
        region a:4-235 [127468]
      9. 2awo
        automatically matched to d1q12a2
        complexed with adp, mg
        
        region b:4-235 [127470]
      10. 2awo
        automatically matched to d1q12a2
        complexed with adp, mg
        
        region c:4-235 [127472]
      11. 2awo
        automatically matched to d1q12a2
        complexed with adp, mg
        
        region d:4-235 [127474]
      12. 1q1e
        
        region a:4-235 [95571]
        region b:4-235 [95573]
      13. 1q1b
        
        region a:4-235 [95563]
        region b:4-235 [95565]
        region c:4-235 [95567]
        region d:4-235 [95569]
  8. Glucose transport protein GlcV, N-terminal domain [89681]
    1. Archaeon Sulfolobus solfataricus [TaxId: 2287] [89682] (5)
      1. 1oxx
        complexed with iod; mutant
        
        region k:1-242 [93716]
      2. 1oxs
        complexed with iod
        
        region c:1-242 [87520]
      3. 1oxv
        complexed with anp, iod, mg
        
        region a:1-242 [87534]
        region b:1-242 [87536]
        region d:1-242 [87538]
      4. 1oxu
        complexed with adp, iod, mg
        
        region a:1-242 [87528]
        region b:1-242 [87530]
        region c:1-242 [87532]
      5. 1oxt
        
        region a:1-242 [87522]
        region b:1-242 [87524]
        region d:1-242 [87526]
  9. ABC transporter involved in vitamin B12 uptake, BtuD [75209]
    1. Escherichia coli [TaxId: 562] [75210] (1)
      1. 1l7v
        complexed with mse, v4o
        
        chain c [73674]
        chain d [73675]
  10. Haemolysin B ATP-binding protein [89683]
    1. Escherichia coli [TaxId: 562] [89684] (3)
      1. 2pmk
        automatically matched to d1mt0a_
        complexed with 128, adp
        
        region a:467-707 [149669]
      2. 2ff7
        automatically matched to d1mt0a_
        complexed with adp
        
        region a:467-707 [133377]
      3. 1mt0
        complexed with so4
        
        chain a [85096]
  11. Multidrug resistance ABC transporter MsbA, C-terminal domain [89685]
    a low-resolution structure of the E. coli MsbA in an open conformation is also available (f.35.1.1)
    1. Vibrio cholerae [TaxId: 666] [89686] (1)
      1. 1pf4
        structure in a closed conformation
        
        region a:321-564 [88052]
        region b:321-564 [88054]
        region c:321-564 [88056]
        region d:321-564 [88058]
    2. Salmonella typhimurium [TaxId: 90371] [159568] (12)
      SQ P63359 329-581
      1. 3b60
        complexed with anp
        
        region a:329-581 [154868]
      2. 3b60
        automatically matched to 3B60 A:329-581
        complexed with anp
        
        region b:329-581 [154870]
      3. 3b60
        automatically matched to 3B60 A:329-581
        complexed with anp
        
        region c:329-581 [154872]
      4. 3b60
        automatically matched to 3B60 A:329-581
        complexed with anp
        
        region d:329-581 [154874]
      5. 3b5y
        automatically matched to 3B60 A:329-581
        complexed with anp
        
        region a:329-581 [154852]
      6. 3b5y
        automatically matched to 3B60 A:329-581
        complexed with anp
        
        region b:329-581 [154854]
      7. 3b5y
        automatically matched to 3B60 A:329-581
        complexed with anp
        
        region c:329-581 [154856]
      8. 3b5y
        automatically matched to 3B60 A:329-581
        complexed with anp
        
        region d:329-581 [154858]
      9. 3b5z
        automatically matched to 3B60 A:329-581
        complexed with adp, i42
        
        region a:329-581 [154860]
      10. 3b5z
        automatically matched to 3B60 A:329-581
        complexed with adp, i42
        
        region b:329-581 [154862]
      11. 3b5z
        automatically matched to 3B60 A:329-581
        complexed with adp, i42
        
        region c:329-581 [154864]
      12. 3b5z
        automatically matched to 3B60 A:329-581
        complexed with adp, i42
        
        region d:329-581 [154866]
  12. Multidrug resistance ABC transporter LmrA, C-terminal domain [102381]
    1. Lactococcus lactis [TaxId: 1358] [102382] (1)
      1. 1mv5
        complexed with adp, atp, mg
        
        chain a [91469]
        chain b [91470]
        chain c [91471]
        chain d [91472]
  13. Rad50 [52691]
    1. Archaeon Pyrococcus furiosus [TaxId: 2261] [52692] (4)
      1. 1f2t
        N- and C-terminal subdomains only; the middle coiled coil domain is deleted
        
        chain a,b [32373]
      2. 1f2u
        N- and C-terminal subdomains only; the middle coiled coil domain is deleted
        complexed with atp, mg
        
        chain a,b [32374]
        chain c,d [32375]
      3. 1us8
        N- and C-terminal subdomains only; the middle coiled coil domain is deleted
        mutant
        
        chain a,b [99859]
      4. 1ii8
        N- and C-terminal subdomains; include a small fragment of the middle coiled coil domain
        complexed with po4
        
        chain a,b [62417]
  14. Smc head domain [52693]
    1. Thermotoga maritima [TaxId: 2336] [52694] (1)
      1. 1e69
        N- and C-terminal subdomains only; the middle coiled coil domain is deleted
        
        chain a [32376]
        chain b [32377]
        chain c [32378]
        chain d [32379]
        chain e [32380]
        chain f [32381]
    2. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [117544] (1)
      SQ P32908 2-214,1024-1223
      1. 1w1w
        complexed with atg, mg
        
        chain a [114080]
        chain b [114081]
        chain c [114082]
        chain d [114083]
    3. Pyrococcus furiosus [TaxId: 2261] [117545] (2)
      SQ Q877I1 1-167,1012-1173
      1. 1xew
        
        chain x,y [115235]
      2. 1xex
        complexed with atp, mg; mutant
        
        chain a,b [115236]
  15. Cell division protein MukB [52695]
    1. Escherichia coli [TaxId: 562] [52696] (1)
      1. 1qhl
        N-terminal (sub)domain only; in the absence of the C-terminal domain complementing the central core structure, the P-loop region folds in a helix-loop-helix structure
        
        chain a [32382]
  16. DNA repair protein MutS, the C-terminal domain [52697]
    1. Thermus aquaticus [TaxId: 271] [52698] (4)
      1. 1ewq
        CASP4
        complexed with edo, so4
        
        region a:542-765 [32383]
        region b:1542-1762 [32384]
      2. 1fw6
        protein/DNA complex; complexed with adp, mg, so4
        
        region a:542-765 [32385]
        region b:1542-1762 [32386]
      3. 1nne
        complexed with adp, bef, edo, so4
        
        region a:542-765 [85896]
        region b:1542-1765 [85900]
      4. 1ewr
        
        region a:542-765 [32387]
        region b:1542-1762 [32388]
    2. Escherichia coli [TaxId: 562] [52699] (10)
      SQ P23909 2-800
      1. 1wb9
        automatically matched to d1e3ma2
        complexed with adp, mg; mutant
        
        region a:567-800 [120834]
      2. 1w7a
        complexed with atp, mo3
        
        region a:567-800 [109219]
        region b:567-800 [109223]
      3. 1e3m
        complexed with adp, mo4
        
        region a:567-800 [32389]
        region b:567-800 [32390]
      4. 1oh6
        complexed with adp, mo4
        
        region a:567-800 [92988]
        region b:567-800 [92992]
      5. 1wbd
        automatically matched to d1e3ma2
        complexed with adp, mg; mutant
        
        region a:567-800 [120842]
      6. 1wbb
        automatically matched to d1e3ma2
        complexed with adp, mg; mutant
        
        region a:567-800 [120838]
      7. 1ng9
        complexed with adp, mo6; mutant
        
        region a:567-800 [80481]
        region b:567-800 [80485]
      8. 1oh7
        complexed with adp, mo4
        
        region a:567-800 [92996]
        region b:567-800 [93000]
      9. 1oh5
        complexed with adp, mo4
        
        region a:567-800 [92980]
        region b:567-800 [92984]
      10. 1oh8
        complexed with adp, mo4
        
        region a:567-800 [93004]
        region b:567-800 [93008]
  17. Putative ABC transporter PF0895 [110560]
    1. Pyrococcus furiosus [TaxId: 2261] [110561] (1)
      SQ Q8U2E3
      1. 1sgw
        Structural genomics target
        complexed with cl, na
        
        chain a [105541]
  18. Hypothetical protein PH0022, N-terminal domain [117546]
    1. Pyrococcus horikoshii [TaxId: 53953] [117547] (2)
      SQ O57758
      1. 1v43
        
        region a:7-245 [113523]
      2. 1vci
        complexed with atp
        
        region a:7-245 [113609]
  19. Putative ABC transporter TM0544 [117548]
    1. Thermotoga maritima [TaxId: 2336] [117549] (1)
      SQ Q9WZ14
      1. 1vpl
        Structural genomics target
        complexed with so4
        
        chain a [113966]
  20. Putative multidrug export ATP-binding/permease protein SAV1866 [142303]
    1. Staphylococcus aureus [TaxId: 1280] [142304] (4)
      SQ Q99T13 324-578
      1. 2hyd
        complexed with adp, na
        
        region a:324-578 [136875]
      2. 2hyd
        automatically matched to 2HYD A:324-578
        complexed with adp, na
        
        region b:324-578 [136877]
      3. 2onj
        automatically matched to 2HYD A:324-578
        complexed with anp, na
        
        region a:324-578 [139154]
      4. 2onj
        automatically matched to 2HYD A:324-578
        complexed with anp, na
        
        region b:324-578 [139156]
  21. Molybdate/tungstate import ATP-binding protein WtpC (ModC) [159569]
    1. Archaeoglobus fulgidus [TaxId: 2234] [159570] (4)
      SQ O30144 1-240
      1. 2onk
        complexed with mg, po4, wo4
        
        region a:1-240 [148903]
      2. 2onk
        automatically matched to 2ONK A:1-240
        complexed with mg, po4, wo4
        
        region b:1-240 [148904]
      3. 2onk
        automatically matched to 2ONK A:1-240
        complexed with mg, po4, wo4
        
        region f:1-240 [148908]
      4. 2onk
        automatically matched to 2ONK A:1-240
        complexed with mg, po4, wo4
        
        region g:1-240 [148909]
  22. Methionine import ATP-binding protein MetN [159571]
    1. Escherichia coli [TaxId: 562] [159572] (4)
      SQ P30750 1-240
      1. 3dhw
        
        region c:1-240 [157729]
      2. 3dhw
        automatically matched to 3DHW C:1-240
        
        region d:1-240 [157731]
      3. 3dhw
        automatically matched to 3DHW C:1-240
        
        region g:1-240 [157735]
      4. 3dhw
        automatically matched to 3DHW C:1-240
        
        region h:1-240 [157737]
  23. Sulfate/molybdate ABC transporter, ATP-binding protein [159573]
    1. Methanosarcina acetivorans [TaxId: 2214] [159574] (2)
      SQ Q8TTZ3 1-229
      1. 3d31
        complexed with wo4
        
        region a:1-229 [157262]
      2. 3d31
        automatically matched to 3D31 A:1-229
        complexed with wo4
        
        region b:1-229 [157264]
17. Tandem AAA-ATPase domain [81268] (27)
  duplication: tandem repeat of two RecA-like (AAA) domains
  1. DEXX box DNA helicase [52701]
    each AAA domain contains an all-alpha insert subdomain
    1. Bacillus stearothermophilus, PcrA [TaxId: 1422] [52702] (5)
      1. 1qhh
        complexed with atp
        
        chain a,b,c,d [32393]
      2. 1pjr
        
        region a:1-318 [32391]
        region a:319-651 [32392]
      3. 1qhg
        complexed with atp, mg; mutant
        
        region a:1-318 [59032]
        region a:319-651 [59033]
      4. 2pjr
        complexed with so4
        
        region a:7-318 [32395]
        region a:319-548,b: [32396]
        region f:704-1018 [32397]
        region f:1019-1247,g: [32398]
      5. 3pjr
        complexed with atp
        
        region a:4-318 [32399]
        region a:319-652 [32400]
    2. Escherichia coli, RepD [TaxId: 562] [52703] (1)
      1. 1uaa
        protein/DNA complex
        
        region a:2-307 [32401]
        region a:308-640 [32402]
        region b:2-307 [32403]
        region b:308-642 [32404]
  2. Putative DEAD box RNA helicase [52704]
    homologous to eIF4a and UvrB
    1. Archaeon Methanococcus jannaschii [TaxId: 2190] [52705] (1)
      1. 1hv8
        complexed with so4
        
        region a:3-210 [32405]
        region a:211-365 [32406]
        region b:3-210 [32407]
        region b:211-365 [32408]
  3. Probable DEAD box RNA helicase YqfR [102383]
    1. Bacillus stearothermophilus [TaxId: 1422] [102384] (1)
      1. 1q0u
        N-terminal domain only
        
        chain a [95512]
        chain b [95513]
  4. RecQ helicase domain [102385]
    1. Escherichia coli [TaxId: 562] [102386] (2)
      1. 1oyw
        complexed with mn, zn
        
        region a:1-206 [93761]
        region a:207-406 [93762]
      2. 1oyy
        complexed with ags, mn, zn
        
        region a:1-206 [93773]
        region a:207-406 [93774]
  5. DEAD box RNA helicase rck/p54 [102387]
    1. Human (Homo sapiens) [TaxId: 9606] [102388] (1)
      1. 1vec
        N-terminal domain only
        complexed with tar, zn2
        
        chain a [100575]
        chain b [100576]
  6. RecG helicase domain [69494]
    1. Thermotoga maritima [TaxId: 2336] [69495] (1)
      1. 1gm5
        complexed with adp, mg
        
        region a:286-549 [65300]
        region a:550-755 [65301]
  7. Initiation factor 4a [52706]
    homologous to UvrB
    1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [52707] (5)
      1. 1fuk
        C-terminal domain
        complexed with zn
        
        chain a [32409]
      2. 1qde
        N-terminal AAA domain; P-loop is empty and in a non-canonical conformation
        complexed with so4
        
        chain a [32410]
      3. 1qva
        N-terminal AAA domain; P-loop is empty and in a non-canonical conformation
        
        chain a [32411]
      4. 1fuu
        
        chain a [32412]
      5. 1fuu
        
        region b:11-225 [32413]
        region b:226-394 [32414]
    2. Human (Homo sapiens) [TaxId: 9606] [142305] (2)
      SQ P60842 21-238
      4A-I
      1. 2g9n
        complexed with mly
        
        region a:21-238 [134814]
      2. 2g9n
        automatically matched to 2G9N A:21-238
        complexed with mly
        
        region b:23-237 [134815]
  8. Nucleotide excision repair enzyme UvrB [52708]
    contains large insertions in the first AAA domain
    1. Thermus thermophilus [TaxId: 274] [52709] (2)
      1. 1c4o
        complexed with bog, so4
        
        region a:2-409 [32415]
        region a:410-583 [32416]
      2. 1d2m
        complexed with bog, so4
        
        region a:2-409 [32417]
        region a:410-583 [32418]
    2. Bacillus caldotenax [TaxId: 1395] [52710] (7)
      SQ P56981
      1. 1t5l
        complexed with zn; mutant
        
        region a:2-414 [106455]
        region a:415-595 [106456]
        region b:2-414 [106457]
        region b:415-595 [106458]
      2. 2fdc
        automatically matched to d1d9xa1
        complexed with flq
        
        region a:2-414 [133302]
      3. 2fdc
        automatically matched to d1d9xa2
        complexed with flq
        
        region a:415-594 [133303]
      4. 2fdc
        automatically matched to d1d9xa1
        complexed with flq
        
        region b:2-414 [133304]
      5. 2fdc
        automatically matched to d1d9xa2
        complexed with flq
        
        region b:415-593 [133305]
      6. 1d9x
        complexed with zn
        
        region a:2-414 [32419]
        region a:415-595 [32420]
      7. 1d9z
        complexed with atp, mg, zn
        
        region a:2-414 [32421]
        region a:415-595 [32422]
  9. Translocation ATPase SecA, nucleotide-binding domains [82414]
    a pre-protein crosslinking domain inserted in the first AAA domain
    1. Bacillus subtilis [TaxId: 1423] [82415] (4)
      SQ P28366
      1. 1tf5
        
        region a:1-226,a:349-395 [106836]
        region a:396-570 [106837]
      2. 1m6n
        complexed with so4
        
        region a:1-226,a:349-395 [78699]
        region a:396-570 [78700]
      3. 1tf2
        complexed with adp, mg
        
        region a:1-226,a:349-395 [106832]
        region a:396-570 [106833]
      4. 1m74
        complexed with adp, mg, so4
        
        region a:1-226,a:349-395 [78722]
        region a:396-570 [78723]
    2. Mycobacterium tuberculosis [TaxId: 1773] [89687] (2)
      1. 1nkt
        complexed with adp, mg
        
        region a:-15-225,a:350-396 [85832]
        region a:397-615 [85833]
        region b:-15-225,b:350-396 [85836]
        region b:397-615 [85837]
      2. 1nl3
        
        region a:-15-225,a:350-396 [85841]
        region a:397-615 [85842]
        region b:-15-225,b:350-396 [85845]
        region b:397-615 [85846]
  10. Spliceosome RNA helicase BAT1 (UAP56) [110562]
    1. Human (Homo sapiens) [TaxId: 9606] [110563] (5)
      SQ Q13838 45-428
      1. 1t6n
        complexed with flc
        
        chain a [106576]
        chain b [106577]
      2. 1t5i
        
        chain a [106450]
      3. 1xti
        complexed with ipa
        
        region a:46-254 [116022]
        region a:255-423 [116023]
      4. 1xtj
        complexed with acy, adp, mg
        
        region a:46-254 [116024]
        region a:255-423 [116025]
      5. 1xtk
        complexed with bme; mutant
        
        region a:46-254 [116026]
        region a:255-423 [116027]
  11. Exodeoxyribonuclease V beta chain (RecB), N-terminal domain [117550]
    each AAA domain contains an all-alpha insert subdomain
    1. Escherichia coli [TaxId: 562] [117551] (1)
      SQ P08394
      1. 1w36
        complexed with ca
        
        region b:1-485 [114122]
        region b:486-880 [114123]
        region e:1-485 [114130]
        region e:486-880 [114131]
  12. Exodeoxyribonuclease V gamma chain (RecC), N-terminal domain [117552]
    each AAA domain contains an all-alpha insert subdomain
    1. Escherichia coli [TaxId: 562] [117553] (1)
      SQ P07648
      1. 1w36
        complexed with ca
        
        region c:1-347 [114125]
        region c:348-817 [114126]
        region f:1-347 [114133]
        region f:348-817 [114134]
  13. Exodeoxyribonuclease V alpha chain (RecD) [117554]
    contains extra N-terminal alpha+beta (sub)domain (~100 residues)
    1. Escherichia coli [TaxId: 562] [117555] (1)
      SQ P04993
      1. 1w36
        complexed with ca
        
        region d:2-360 [114128]
        region d:361-606 [114129]
        region g:2-360 [114136]
        region g:361-606 [114137]
  14. putative ATP-dependent RNA helicase VlgB [142306]
    1. Flatworm (Dugesia japonica) [TaxId: 6161] [142307] (2)
      SQ O97032 164-401
      1. 1wrb
        C-terminal domain
        complexed with so4
        
        region a:164-401 [121192]
      2. 1wrb
        automatically matched to 1WRB A:164-401
        complexed with so4
        
        region b:167-401 [121193]
  15. putative ATP-dependent RNA helicase PF2015 [142308]
    separate structures of other domains are known: the middle nuclease domain (scop_sp 89718) and the C-terminal RuvA-like HhH domain (PDB 1x2i)
    1. Pyrococcus furiosus [TaxId: 2261] [142309] (2)
      SQ Q8TZH8 2-201! SQ Q8TZH8 202-487
      1. 1wp9
        complexed with po4
        
        region a:1-200 [121143]
      2. 1wp9
        complexed with po4
        
        region a:201-486 [121144]
  16. ATP-dependent RNA helicase DDX25 [142310]
    1. Human (Homo sapiens) [TaxId: 9606] [142311] (4)
      SQ Q9UHL0 307-474
      1. 2g2j
        C-terminal domain
        complexed with so4
        
        region a:307-474 [134536]
      2. 2g2j
        automatically matched to 2G2J A:307-474
        complexed with so4
        
        region b:307-474 [134537]
      3. 2g2j
        automatically matched to 2G2J A:307-474
        complexed with so4
        
        region c:307-474 [134538]
      4. 2g2j
        automatically matched to 2G2J A:307-474
        complexed with so4
        
        region d:307-474 [134539]
  17. Helicase of the SNF2/Rad54 hamily [142312]
    1. Sulfolobus solfataricus [TaxId: 2287] [142313] (8)
      SQ Q97XQ7 432-661! SQ Q97XQ7 662-802! SQ Q97XQ7 663-802
      1. 1z5z
        PDB chain is longer than UniProt sequence
        
        region a:663-906 [124499]
      2. 1z5z
        automatically matched to 1Z5Z A:663-906
        
        region b:663-903 [124500]
      3. 1z63
        
        region a:432-661 [124502]
      4. 1z63
        PDB chain is longer than UniProt sequence
        
        region a:662-903 [124503]
      5. 1z63
        automatically matched to 1Z63 A:432-661
        
        region b:432-661 [124504]
      6. 1z63
        automatically matched to 1Z63 A:662-903
        
        region b:662-903 [124505]
      7. 1z6a
        automatically matched to 1Z63 A:432-661
        complexed with hg, po4
        
        region a:432-661 [124508]
      8. 1z6a
        automatically matched to 1Z63 A:662-903
        complexed with hg, po4
        
        region a:662-903 [124509]
  18. Probable ATP-dependent RNA helicase DDX48 [142314]
    Eukaryotic translation initiation factor 4A isoform 3
    1. Human (Homo sapiens) [TaxId: 9606] [142315] (10)
      SQ P38919 22-243! SQ P38919 244-411
      1. 2j0s
        automatically matched to 2HYI C:22-243
        complexed with anp, mg
        
        region a:22-243 [137913]
      2. 2j0s
        automatically matched to 2HYI C:244-411
        complexed with anp, mg
        
        region a:244-411 [137914]
      3. 2hyi
        complexed with anp, mg; mutant
        
        region c:22-243 [136892]
      4. 2hyi
        complexed with anp, mg; mutant
        
        region c:244-411 [136893]
      5. 2hyi
        automatically matched to 2HYI C:22-243
        complexed with anp, mg; mutant
        
        region i:22-243 [136896]
      6. 2hyi
        automatically matched to 2HYI C:244-411
        complexed with anp, mg; mutant
        
        region i:244-411 [136897]
      7. 2j0q
        automatically matched to 2HYI C:22-243
        complexed with anp, mg
        
        region a:22-243 [137904]
      8. 2j0q
        automatically matched to 2HYI C:244-411
        complexed with anp, mg
        
        region a:244-411 [137905]
      9. 2j0q
        automatically matched to 2HYI C:22-243
        complexed with anp, mg
        
        region b:22-243 [137906]
      10. 2j0q
        automatically matched to 2HYI C:244-411
        complexed with anp, mg
        
        region b:244-411 [137907]
  19. Rad54-like, Rad54L [142316]
    1. Zebra fish (Danio rerio) [TaxId: 7955] [142317] (2)
      SQ Q7ZV09 390-735! SQ Q7ZV09 92-389
      1. 1z3i
        complexed with so4, zn
        
        region x:390-735 [124406]
      2. 1z3i
        complexed with so4, zn
        
        region x:92-389 [124407]
  20. DNA repair protein RAD25 [142318]
    shares with the DNA helicase UvsW (scop_fa 102396) extra N-terminal alpha+beta subdomain that might be related to the DNA repair protein MutS domain I (scop_sf 55271)
    1. Archaeoglobus fulgidus [TaxId: 2234] [142319] (10)
      SQ O29889 237-436! SQ O29889 238-434! SQ O29889 3-236! SQ O29889 4-209
      1. 2fz4
        N-terminal domain only
        
        region a:24-229 [134419]
      2. 2fwr
        complexed with ipa, po4
        
        region a:257-456 [134253]
      3. 2fwr
        complexed with ipa, po4
        
        region a:23-256 [134254]
      4. 2fwr
        automatically matched to 2FWR A:257-456
        complexed with ipa, po4
        
        region b:257-454 [134255]
      5. 2fwr
        automatically matched to 2FWR A:23-256
        complexed with ipa, po4
        
        region b:23-256 [134256]
      6. 2fwr
        automatically matched to 2FWR A:257-456
        complexed with ipa, po4
        
        region c:257-454 [134257]
      7. 2fwr
        automatically matched to 2FWR A:23-256
        complexed with ipa, po4
        
        region c:23-256 [134258]
      8. 2fwr
        automatically matched to 2FWR A:257-456
        complexed with ipa, po4
        
        region d:257-456 [134259]
      9. 2fwr
        automatically matched to 2FWR A:23-256
        complexed with ipa, po4
        
        region d:23-256 [134260]
      10. 2fzl
        C-terminal domain only
        complexed with ipa
        
        region a:258-454 [134457]
  21. Transcription-repair coupling factor, TRCF [142320]
    similar to UvrB in the N-terminal part and DEAD helicases in the C-terminal part; also contains CarD-like domain in the middle and TRCF domain at the C-terminus
    1. Escherichia coli [TaxId: 562] [142321] (10)
      SQ P30958 2-348! SQ P30958 26-333! SQ P30958 349-465! SQ P30958 546-778! SQ P30958 779-989
      1. 2b2n
        N-terminal domain only
        complexed with na, p4c, so4
        
        region a:26-333 [127710]
      2. 2b2n
        automatically matched to 2B2N A:26-333
        complexed with na, p4c, so4
        
        region b:26-333 [127711]
      3. 2eyq
        complexed with epe, so4
        
        region a:349-465 [132591]
      4. 2eyq
        complexed with epe, so4
        
        region a:546-778 [132592]
      5. 2eyq
        complexed with epe, so4
        
        region a:2-348 [132593]
      6. 2eyq
        complexed with epe, so4
        
        region a:779-989 [132594]
      7. 2eyq
        automatically matched to 2EYQ A:349-465
        complexed with epe, so4
        
        region b:349-465 [132597]
      8. 2eyq
        automatically matched to 2EYQ A:546-778
        complexed with epe, so4
        
        region b:546-778 [132598]
      9. 2eyq
        automatically matched to 2EYQ A:2-348
        complexed with epe, so4
        
        region b:5-348 [132599]
      10. 2eyq
        automatically matched to 2EYQ A:779-989
        complexed with epe, so4
        
        region b:779-989 [132600]
  22. Putative ATP-dependent RNA helicase DHH1 [142322]
    1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [142323] (2)
      SQ P39517 252-422! SQ P39517 46-251
      1. 1s2m
        
        region a:46-251 [118844]
      2. 1s2m
        
        region a:252-422 [118845]
  23. Hel308 helicase [159575]
    1. Archaeoglobus fulgidus [TaxId: 2234] [159576] (4)
      1. 2p6r
        
        region a:1-202 [149272]
      2. 2p6r
        
        region a:203-403 [149273]
      3. 2p6u
        automatically matched to 2P6R A:1-202
        complexed with po4
        
        region a:1-202 [149276]
      4. 2p6u
        automatically matched to 2P6R A:203-403
        complexed with po4
        
        region a:203-403 [149277]
18. Extended AAA-ATPase domain [81269] (34)
  fold is similar to that of RecA, but lacks the last two strands, followed by a family-specific Arg-finger domain
  1. gamma subunit of DNA polymerase III, N-domain [64031]
    1. Escherichia coli [TaxId: 562] [64032] (3)
      SQ P06710 5-368
      1. 1jr3
        complexed with so4, zn
        
        region a:3-242 [63246]
        region b:4-242 [63248]
        region c:3-242 [63250]
      2. 1xxh
        complexed with atg, po4, zn
        
        region b:5-242 [116166]
        region c:5-242 [116168]
        region d:5-242 [116170]
        region g:5-242 [116176]
        region h:5-242 [116178]
        region i:5-242 [116180]
      3. 1xxi
        complexed with adp, po4, zn
        
        region b:5-242 [116186]
        region c:5-242 [116188]
        region d:5-242 [116190]
        region g:5-242 [116196]
        region h:5-242 [116198]
        region i:5-242 [116200]
    2. Thermotoga maritima [TaxId: 2336] [142324] (1)
      SQ Q9WZM9 11-208
      1. 2gno
        complexed with etx, na, unl
        
        region a:11-208 [135415]
  2. delta prime subunit of DNA polymerase III, N-domain [52711]
    contains additional alpha-helical domain after the family specific domains
    1. Escherichia coli [TaxId: 562] [52712] (6)
      SQ P28631
      1. 1njf
        AAA+ domain only; nucleotide-bound form
        complexed with adp, atg, zn
        
        chain a [85781]
        chain b [85782]
        chain c [85783]
        chain d [85784]
      2. 1a5t
        complexed with zn
        
        region a:1-207 [32423]
      3. 1njg
        AAA+ domain only; nucleotide-free form
        complexed with so4, zn
        
        chain a [85785]
        chain b [85786]
      4. 1jr3
        complexed with so4, zn
        
        region e:1-207 [63254]
      5. 1xxh
        complexed with atg, po4, zn
        
        region e:1-207 [116172]
        region j:1-207 [116182]
      6. 1xxi
        complexed with adp, po4, zn
        
        region e:1-207 [116192]
        region j:1-207 [116202]
  3. delta subunit of DNA polymerase III, N-domain [64033]
    1. Escherichia coli [TaxId: 562] [64034] (5)
      SQ P28630
      1. 1jql
        N-terminal subdomain only
        mutant
        
        chain b [63234]
      2. 1jr3
        complexed with so4, zn
        
        region d:1-211 [63252]
      3. 1jqj
        mutant
        
        region c:1-211 [67098]
        region d:1-209 [67100]
      4. 1xxh
        complexed with atg, po4, zn
        
        region a:1-211 [116164]
        region f:1-211 [116174]
      5. 1xxi
        complexed with adp, po4, zn
        
        region a:1-211 [116184]
        region f:1-211 [116194]
  4. Replication factor C [64035]
    contains additional alpha-helical domain after the family specific domains
    1. Archaeon Pyrococcus furiosus [TaxId: 2261] [64036] (1)
      1. 1iqp
        complexed with adp
        
        region a:2-232 [62650]
        region b:2-232 [62652]
        region c:9-232 [62654]
        region d:2-232 [62656]
        region e:2-232 [62658]
        region f:2-232 [62660]
  5. Chromosomal replication initiation factor DnaA [82416]
    contains TrpR-like DNA-binding domain after the family specific domains
    1. Aquifex aeolicus [TaxId: 63363] [82417] (5)
      1. 1l8q
        complexed with adp, mg, mse
        
        region a:77-289 [77810]
      2. 2hcb
        automatically matched to d1l8qa2
        complexed with abg, mg
        
        region a:77-289 [136326]
      3. 2hcb
        automatically matched to d1l8qa2
        complexed with abg, mg
        
        region b:77-289 [136328]
      4. 2hcb
        automatically matched to d1l8qa2
        complexed with abg, mg
        
        region c:77-289 [136330]
      5. 2hcb
        automatically matched to d1l8qa2
        complexed with abg, mg
        
        region d:77-289 [136332]
  6. Holliday junction helicase RuvB [52713]
    contains "winged helix" DNA-binding domain after the family specific domains
    1. Thermus thermophilus [TaxId: 274] [52714] (3)
      1. 1ixs
        complexed with anp
        
        region b:4-242 [76934]
      2. 1hqc
        complexed with ade, mg
        
        region a:5-242 [32424]
        region b:5-242 [32425]
      3. 1ixr
        complexed with anp; mutant
        
        region c:5-242 [76931]
    2. Thermotoga maritima [TaxId: 2336] [64037] (6)
      1. 1in4
        complexed with act, adp, co, hez
        
        region a:17-254 [62598]
      2. 1j7k
        complexed with act, atp, co, hez; mutant
        
        region a:19-254 [62696]
      3. 1in6
        complexed with act, adp, co; mutant
        
        region a:17-254 [62602]
      4. 1in7
        complexed with act, adp; mutant
        
        region a:17-254 [62604]
      5. 1in8
        complexed with adp; mutant
        
        region a:17-254 [62606]
      6. 1in5
        complexed with adp; mutant
        
        region a:17-254 [62600]
  7. Transcriptional activator sigm54 (NtrC1), C-terminal domain [102389]
    1. Aquifex aeolicus [TaxId: 63363] [102390] (2)
      1. 1ny5
        inactive state
        complexed with adp, gol, mg, po4
        
        region a:138-384 [92318]
        region b:138-385 [92320]
      2. 1ny6
        AAA+ domain only in the active state
        complexed with adp
        
        chain a [92321]
        chain b [92322]
        chain c [92323]
        chain d [92324]
        chain e [92325]
        chain f [92326]
        chain g [92327]
        chain h [92328]
        chain i [92329]
        chain j [92330]
        chain k [92331]
        chain l [92332]
        chain m [92333]
        chain n [92334]
  8. CDC6, N-domain [52715]
    contains "winged helix" DNA-binding domain after the family specific domains
    1. Archaeon Pyrobaculum aerophilum [TaxId: 13773] [52716] (1)
      1. 1fnn
        complexed with adp, mg
        
        region a:1-276 [32426]
        region b:1-276 [32427]
  9. Hexamerization domain of N-ethylmalemide-sensitive fusion (NSF) protein [52717]
    1. Chinese hamster (Cricetulus griseus) [TaxId: 10029] [52718] (2)
      1. 1d2n
        complexed with anp, gol, mg
        
        chain a [32428]
      2. 1nsf
        complexed with atp, mg
        
        chain a [32429]
  10. Membrane fusion ATPase VCP/p97 [64038]
    1. Mouse (Mus musculus) [TaxId: 10090] [64039] (4)
      1. 1e32
        D1 domain from the N-D1 fragment
        complexed with adp
        
        region a:201-458 [59184]
      2. 1r7r
        complexed with adp
        
        region a:201-470 [97204]
        region a:471-735 [97205]
      3. 1oz4
        complete low resolution structure
        complexed with adp, af3, zn
        
        region a:201-470 [93794]
        region a:471-763 [93795]
        region b:201-470 [93798]
        region b:471-763 [93799]
        region c:201-470 [93802]
        region c:471-763 [93803]
      4. 1s3s
        D1 domain from the N-D1 fragment
        complexed with adp
        
        region a:201-458 [98440]
        region b:201-458 [98443]
        region c:201-458 [98446]
        region d:201-458 [98449]
        region e:201-458 [98452]
        region f:201-458 [98455]
  11. AAA domain of cell division protein FtsH [82418]
    ATP-dependent protease
    1. Escherichia coli [TaxId: 562] [82419] (1)
      1. 1lv7
        complexed with so4
        
        chain a [78232]
    2. Thermus thermophilus [TaxId: 274] [82420] (4)
      1. 1ixz
        complexed with hg, so4
        
        chain a [76938]
      2. 1iy1
        complexed with adp
        
        chain a [76940]
      3. 1iy0
        complexed with anp
        
        chain a [76939]
      4. 1iy2
        complexed with so4
        
        chain a [76941]
    3. Thermotoga maritima [TaxId: 2336] [142325] (12)
      SQ Q9WZ49 150-402
      1. 2ce7
        complexed with adp, mg, zn; mutant
        
        region a:150-402 [130313]
      2. 2ce7
        automatically matched to 2CE7 A:150-402
        complexed with adp, mg, zn; mutant
        
        region b:150-402 [130315]
      3. 2ce7
        automatically matched to 2CE7 A:150-402
        complexed with adp, mg, zn; mutant
        
        region c:150-402 [130317]
      4. 2ce7
        automatically matched to 2CE7 A:150-402
        complexed with adp, mg, zn; mutant
        
        region d:150-402 [130319]
      5. 2ce7
        automatically matched to 2CE7 A:150-402
        complexed with adp, mg, zn; mutant
        
        region e:152-402 [130321]
      6. 2ce7
        automatically matched to 2CE7 A:150-402
        complexed with adp, mg, zn; mutant
        
        region f:150-402 [130323]
      7. 2cea
        automatically matched to 2CE7 A:150-402
        complexed with adp, mg, zn; mutant
        
        region a:150-402 [130333]
      8. 2cea
        automatically matched to 2CE7 A:150-402
        complexed with adp, mg, zn; mutant
        
        region b:150-402 [130335]
      9. 2cea
        automatically matched to 2CE7 A:150-402
        complexed with adp, mg, zn; mutant
        
        region c:150-402 [130337]
      10. 2cea
        automatically matched to 2CE7 A:150-402
        complexed with adp, mg, zn; mutant
        
        region d:150-402 [130339]
      11. 2cea
        automatically matched to 2CE7 A:150-402
        complexed with adp, mg, zn; mutant
        
        region e:152-402 [130341]
      12. 2cea
        automatically matched to 2CE7 A:150-402
        complexed with adp, mg, zn; mutant
        
        region f:150-402 [130343]
  12. HslU [52721]
    ATPase subunit of ATP-dependent protease
    1. Escherichia coli [TaxId: 562] [52722] (10)
      1. 1e94
        complexed with anp
        
        chain e [32442]
        chain f [32443]
      2. 1ht1
        complexed with adp
        
        chain e [65928]
        chain f [65929]
        chain g [65930]
        chain i [65931]
      3. 1ht2
        complexed with adp
        
        chain e [65940]
        chain f [65941]
        chain g [65942]
        chain h [65943]
      4. 1hqy
        complexed with adp
        
        chain e [65913]
        chain f [65914]
      5. 1do0
        
        chain a [32432]
        chain b [32433]
        chain c [32434]
        chain d [32435]
        chain e [32436]
        chain f [32437]
      6. 1g4a
        complexed with dat
        
        chain e [32444]
        chain f [32445]
      7. 1do2
        
        chain a [32438]
        chain b [32439]
        chain c [32440]
        chain d [32441]
      8. 1yyf
        automatically matched to d1e94e_
        complexed with adp
        
        region a:2-443 [124215]
      9. 1yyf
        automatically matched to d1e94e_
        complexed with adp
        
        region b:2-443 [124216]
      10. 1g4b
        
        chain e [32446]
        chain f [32447]
        chain k [32448]
        chain l [32449]
    2. Haemophilus influenzae [TaxId: 727] [52723] (6)
      1. 1g41
        complexed with adp, so4
        
        chain a [32450]
      2. 1ofh
        complexed with adp, mg, mo3, mo4, po4
        
        chain a [86948]
        chain b [86949]
        chain c [86950]
      3. 1im2
        complexed with adp, so4
        
        chain a [62564]
      4. 1kyi
        complexed with atp, lvs
        
        chain a [73223]
        chain b [73224]
        chain c [73225]
        chain d [73226]
        chain e [73227]
        chain f [73228]
        chain s [73241]
        chain t [73242]
        chain u [73243]
        chain v [73244]
        chain w [73245]
        chain x [73246]
      5. 1ofi
        complexed with adp, lvs, mg, mo3, mo4, po4
        
        chain a [86957]
        chain b [86958]
        chain c [86959]
      6. 1g3i
        complexed with atp
        
        chain a [32451]
        chain b [32452]
        chain c [32453]
        chain d [32454]
        chain e [32455]
        chain f [32456]
        chain s [32457]
        chain t [32458]
        chain u [32459]
        chain v [32460]
        chain w [32461]
        chain x [32462]
  13. ClpX [102391]
    ATPase subunit of ATP-dependent protease
    1. Helicobacter pylori [TaxId: 210] [102392] (1)
      1. 1um8
        complexed with adp
        
        chain a [99580]
  14. ATPase domain of protease Lon (La) [102393]
    1. Escherichia coli [TaxId: 562] [102394] (1)
      1. 1qzm
        C-terminal all-alpha subdomain only
        
        chain a [96651]
  15. ClpA, an Hsp100 chaperone, AAA+ modules [82421]
    duplication: two AAA+ modules; the first module is structurally similar to the CDC6 module whereas the second module to the HslU module
    1. Escherichia coli [TaxId: 562] [82422] (2)
      SQ Q83LR6
      1. 1r6b
        complexed with adp, mg; mutant
        
        region x:169-436 [104819]
        region x:437-751 [104820]
      2. 1ksf
        complexed with adp, ioh, met, mg, pge; mutant
        
        region x:168-436 [77523]
        region x:437-755 [77524]
  16. ClpB, AAA+ modules [75211]
    ATPase subunit of ATP-dependent protease; similar domain organization to ClpA
    1. Thermus thermophilus [TaxId: 274] [102395] (1)
      1. 1qvr
        complexed with anp, pt
        
        region a:149-535 [96433]
        region a:536-850 [96434]
        region b:149-535 [96436]
        region b:536-850 [96437]
        region c:149-535 [96439]
        region c:536-850 [96440]
    2. Escherichia coli [TaxId: 562] [75212] (1)
      1. 1jbk
        N-terminal subdomain only
        complexed with mg
        
        chain a [71631]
  17. ATPase subunit of magnesium chelatase, BchI [64040]
    1. Rhodobacter capsulatus [TaxId: 1061] [64041] (1)
      1. 1g8p
        CASP4
        
        chain a [60376]
  18. Papillomavirus large T antigen helicase domain [89688]
    1. Simian virus 40 [TaxId: 10633] [89689] (16)
      SQ P03070 265-627
      1. 1svm
        complexed with atp, mg, zn
        
        chain a [112126]
        chain b [112127]
        chain c [112128]
        chain d [112129]
        chain e [112130]
        chain f [112131]
      2. 1svl
        complexed with adp, mg, zn
        
        chain a [112123]
        chain b [112124]
        chain c [112125]
      3. 1svo
        complexed with zn
        
        chain a [112132]
        chain b [112133]
      4. 1n25
        complexed with zn
        
        chain a [85264]
        chain b [85265]
      5. 2h1l
        automatically matched to d1svla_
        complexed with zn
        
        region a:266-627 [135947]
      6. 2h1l
        automatically matched to d1svla_
        complexed with zn
        
        region b:266-627 [135948]
      7. 2h1l
        automatically matched to d1svla_
        complexed with zn
        
        region c:266-627 [135949]
      8. 2h1l
        automatically matched to d1svla_
        complexed with zn
        
        region d:266-627 [135950]
      9. 2h1l
        automatically matched to d1svla_
        complexed with zn
        
        region e:266-627 [135951]
      10. 2h1l
        automatically matched to d1svla_
        complexed with zn
        
        region f:266-627 [135952]
      11. 2h1l
        automatically matched to d1svla_
        complexed with zn
        
        region g:266-627 [135953]
      12. 2h1l
        automatically matched to d1svla_
        complexed with zn
        
        region h:266-627 [135954]
      13. 2h1l
        automatically matched to d1svla_
        complexed with zn
        
        region i:266-627 [135955]
      14. 2h1l
        automatically matched to d1svla_
        complexed with zn
        
        region j:266-627 [135956]
      15. 2h1l
        automatically matched to d1svla_
        complexed with zn
        
        region k:266-627 [135957]
      16. 2h1l
        automatically matched to d1svla_
        complexed with zn
        
        region l:266-627 [135958]
  19. Rep 40 protein helicase domain [110564]
    1. Adeno-associated virus 2, AAV2 [TaxId: 10804] [110565] (2)
      SQ P03132 225-490
      1. 1u0j
        complexed with adp
        
        chain a [107546]
      2. 1s9h
        
        chain a [105381]
        chain b [105382]
        chain c [105383]
  20. Replication factor C1 [110566]
    1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [110567] (1)
      SQ P38630 295-696
      1. 1sxj
        complexed with adp, atg, mg; mutant
        
        region a:295-547 [106082]
  21. Replication factor C4 [110568]
    1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [110569] (1)
      SQ P40339
      1. 1sxj
        complexed with adp, atg, mg; mutant
        
        region b:7-230 [106084]
  22. Replication factor C3 [110570]
    1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [110571] (1)
      SQ P38629
      1. 1sxj
        complexed with adp, atg, mg; mutant
        
        region c:12-238 [106086]
  23. Replication factor C2 [110572]
    1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [110573] (1)
      SQ P40348
      1. 1sxj
        complexed with adp, atg, mg; mutant
        
        region d:26-262 [106088]
  24. Replication factor C5 [110574]
    1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [110575] (1)
      SQ P38251
      1. 1sxj
        complexed with adp, atg, mg; mutant
        
        region e:4-255 [106090]
  25. Replication protein E1 helicase domain [110576]
    1. Human papillomavirus type 18 [TaxId: 333761] [110577] (1)
      SQ P06789 428-629 # structure of the origin-binding domain (210-354) is also known, 1r9w (scop_sp 103119)
      1. 1tue
        mutant
        
        chain a [107323]
        chain d [107325]
        chain f [107327]
        chain h [107329]
        chain k [107331]
        chain m [107333]
  26. CDC6-like protein APE0152, N-terminal domain [117556]
    1. Aeropyrum pernix [TaxId: 56636] [117557] (2)
      SQ Q9YFU8
      1. 1w5s
        complexed with adp, so4
        
        region a:7-293 [114252]
        region b:7-293 [114254]
      2. 1w5t
        complexed with adp, anp, mg
        
        region a:7-293 [114256]
        region b:7-293 [114258]
        region c:7-293 [114260]
  27. Archaeal ATPase SSO1545 [142326]
    member of Pfam 01637 family; overall structural similarity to the archael CDC6-like protein APE0102
    1. Sulfolobus solfataricus [TaxId: 2287] [142327] (2)
      SQ Q97Y08 1-283
      1. 2fna
        complexed with adp, edo, mg
        
        region a:1-283 [133810]
      2. 2fna
        automatically matched to 2FNA A:1-283
        complexed with adp, edo, mg
        
        region b:1-283 [133812]
  28. CED-4, NB-ARC domain [159577]
    belongs to Pfam 00931
    1. Caenorhabditis elegans [TaxId: 6239] [159578] (1)
      SQ P30429 109-385
      1. 2a5y
        complexed with atp, mg; mutant
        
        region b:109-385 [144788]
19. RNA helicase [52724] (3)
  duplication: consists of two similar domains, one binds NTP and the other binds RNA; also contains an all-alpha subdomain in the C-terminal extension
  1. HCV helicase domain [52725]
    1. Human hepatitis C virus (HCV), different isolates [TaxId: 11103] [52726] (6)
      1. 1a1v
        protein/DNA complex; complexed with so4; mutant
        
        region a:190-325 [32467]
        region a:326-624 [32468]
      2. 1hei
        complexed with ca
        
        region a:187-325 [32463]
        region a:326-629 [32464]
        region b:188-325 [32465]
        region b:326-628 [32466]
      3. 8ohm
        
        region a:190-325 [32469]
        region a:326-624 [32470]
      4. 1cu1
        complexed with po4, zn
        
        region a:187-325 [32471]
        region a:326-631 [32472]
        region b:1187-1325 [32473]
        region b:1326-1631 [32474]
      5. 1onb
        an engineered arginine-rich subdomain 2
        
        chain a [87137]
      6. 1jr6
        an engineered arginine-rich subdomain 2
        
        chain a [71821]
  2. Dengue virus helicase [142328]
    1. Dengue virus type 2 [TaxId: 11060] [142329] (8)
      SQ Q91H74 1653-1957! SQ Q91H74 1958-2093
      1. 2bmf
        automatically matched to 2BHR A:483-618
        
        region a:483-618 [128791]
      2. 2bmf
        automatically matched to 2BHR A:178-482
        
        region a:178-482 [128792]
      3. 2bmf
        automatically matched to 2BHR A:483-618
        
        region b:483-618 [128793]
      4. 2bmf
        automatically matched to 2BHR A:178-482
        
        region b:178-482 [128794]
      5. 2bhr
        complexed with so4
        
        region a:483-618 [128542]
      6. 2bhr
        complexed with so4
        
        region a:178-482 [128543]
      7. 2bhr
        automatically matched to 2BHR A:483-618
        complexed with so4
        
        region b:483-618 [128544]
      8. 2bhr
        automatically matched to 2BHR A:178-482
        complexed with so4
        
        region b:178-482 [128545]
  3. YFV helicase domain [142330]
    1. Yellow fever virus [TaxId: 11089] [142331] (2)
      SQ P19901 1669-1842! SQ P19901 1843-2107
      1. 1yks
        
        region a:185-324 [123561]
      2. 1yks
        
        region a:325-623 [123562]
20. Helicase-like "domain" of reverse gyrase [69496] (1)
  1. Helicase-like "domain" of reverse gyrase [69497]
    contains a mobile insertion of LEM/SAP-like HeH motif, residues 354-423
    1. Archaeon Archaeoglobus fulgidus [TaxId: 2234] [69498] (2)
      1. 1gku
        less ordered regions are modeled as poly-ALA
        mutant
        
        region b:1-250 [65257]
        region b:251-498 [65258]
      2. 1gl9
        complexed with anp, mg; mutant
        
        region b:2-250 [65291]
        region b:251-498 [65292]
        region c:3-250 [65294]
        region c:251-498 [65295]
21. DNA helicase UvsW [102396] (1)
  contains extra N-terminal alpha+beta subdomain
  1. DNA helicase UvsW [102397]
    1. Bacteriophage T4 [TaxId: 10665] [102398] (1)
      1. 1rif
        complexed with au, mg; mutant
        
        chain a [97507]
        chain b [97508]
22. YjeE-like [75213] (1)
  mixed beta-sheet; order 234156(0), strands 2 and 6 are antiparallel to the rest
  1. Hypothetical protein HI0065 [75214]
    1. Haemophilus influenzae [TaxId: 727] [75215] (2)
      1. 1htw
        complexed with ADP and magnesium
        complexed with act, adp, mg, na
        
        chain a [71083]
        chain b [71084]
        chain c [71085]
      2. 1fl9
        structural genomics
        CASP4
        complexed with hg
        
        chain a [70137]
        chain b [70138]
        chain c [70139]
23. Type II thymidine kinase [117558] (3)
  N-terminal part of Pfam 00265; parallel beta-sheet of 6 strands, order 324516; topological similarity to the RecA-like proteins, especially CobA (scop_pr 52684)
  1. Thymidine kinase, TK1, N-terminal domain [117559]
    1. Human (Homo sapiens) [TaxId: 9606] [117560] (3)
      SQ P04183 18-191
      1. 1xbt
        complexed with mg, ttp, zn; mutant
        
        region a:18-150 [115080]
        region b:18-150 [115082]
        region c:18-150 [115084]
        region d:18-150 [115086]
        region e:18-150 [115088]
        region f:18-150 [115090]
        region g:18-150 [115092]
        region h:18-150 [115094]
      2. 2orv
        automatically matched to d1xbta1
        complexed with 4ta, zn; mutant
        
        region a:18-150 [139274]
      3. 2orv
        automatically matched to d1xbta1
        complexed with 4ta, zn; mutant
        
        region b:18-150 [139276]
    2. Ureaplasma urealyticum [TaxId: 2130] [117561] (8)
      SQ Q9PPP5 11-211
      1. 2b8t
        complexed with thm, trs, zn
        
        region a:11-149 [128109]
      2. 2b8t
        automatically matched to 2B8T A:11-149
        complexed with thm, trs, zn
        
        region b:11-149 [128111]
      3. 2b8t
        automatically matched to 2B8T A:11-149
        complexed with thm, trs, zn
        
        region c:11-149 [128113]
      4. 2b8t
        automatically matched to 2B8T A:11-149
        complexed with thm, trs, zn
        
        region d:12-149 [128115]
      5. 2uz3
        automatically matched to d1xmra1
        complexed with mg, ttp, zn; mutant
        
        region a:11-149 [140040]
      6. 2uz3
        automatically matched to d1xmra1
        complexed with mg, ttp, zn; mutant
        
        region b:11-149 [140042]
      7. 2uz3
        automatically matched to d1xmra1
        complexed with mg, ttp, zn; mutant
        
        region c:11-149 [140044]
      8. 2uz3
        automatically matched to d1xmra1
        complexed with mg, ttp, zn; mutant
        
        region d:11-149 [140046]
    3. Clostridium acetobutylicum [TaxId: 1488] [117562] (1)
      SQ Q97F65
      1. 1xx6
        Structural genomics target
        complexed with adp, zn
        
        region a:2-142 [116139]
        region b:2-142 [116141]
24. Atu3015-like [142332] (2)
  unknown function; similar to the nucleotide/nucleoside kinases
  1. Hypothetical protein BH3686 [142333]
    annotated as putative gluconate kinase by NESG
    1. Bacillus halodurans [TaxId: 86665] [142334] (1)
      SQ Q9K6P2 1-176
      1. 2bdt
        complexed with so4
        
        region a:1-176 [128344]
  2. Hypothetical protein Atu3015 [142335]
    1. Agrobacterium tumefaciens [TaxId: 358] [142336] (1)
      SQ Q8UBK1 6-181
      1. 1zp6
        complexed with so4
        
        region a:6-181 [125456]