Structural Classification of Proteins

Superfamily: DNA/RNA polymerases

: "palm" domain has a ferredoxin-like fold, related to that of an adenylyl cyclase domain
uperfamily

Lineage:

Root: scop
Class: Multi-domain proteins (alpha and beta) [56572]
Folds consisting of two or more domains belonging to different classes
Fold: DNA/RNA polymerases [56671]
divided into morphological domains including "palm", "thumb" and "fingers"; the catalytic "palm" domain is conserved to all members
Superfamily: DNA/RNA polymerases [56672]
"palm" domain has a ferredoxin-like fold, related to that of an adenylyl cyclase domain
uperfamily

Families:

DNA polymerase I [56673] (12)
1. DNA polymerase I (Klenow fragment) [56674]
  1. Escherichia coli [TaxId: 562] [56675] (14)
    1. 2kfz
      protein/DNA complex; complexed with mg, s, zn
      1. region a:519-928 [42976]
    2. 2kfn
      protein/DNA complex; complexed with mg, mn, s, zn
      1. region a:519-928 [42975]
    3. 1kfs
      protein/DNA complex; complexed with mg, zn; mutant
      1. region a:519-928 [42974]
    4. 1d8y
      1. region a:519-928 [42977]
    5. 1d9d
      1. region a:519-928 [42981]
    6. 1krp
      protein/DNA complex; complexed with pst, zn; mutant
      1. region a:519-928 [42978]
    7. 1ksp
      protein/DNA complex; complexed with pst, zn; mutant
      1. region a:519-928 [42980]
    8. 1qsl
      complexed with eu; mutant
      1. region a:519-928 [42979]
    9. 2kzz
      protein/DNA complex; complexed with zn
      1. region a:519-928 [42982]
    10. 2kzm
      protein/DNA complex; complexed with mn, zn
      1. region a:519-928 [42983]
    11. 1d9f
      1. region a:519-928 [42984]
    12. 1dpi
      complexed with zn
      1. region a:519-928 [42985]
    13. 1kln
      protein/DNA complex; complexed with zn; mutant
      1. region a:519-928 [42986]
    14. 1kfd
      complexed with ctp
      1. region a:519-928 [42987]
  2. Thermus aquaticus [TaxId: 271] [56676] (13)
    1. 1qtm
      protein/DNA complex; complexed with 2dt, mg, ttp
      1. region a:423-831 [42988]
    2. 1qsy
      protein/DNA complex; complexed with 2da, dad, mg; mutant
      1. region a:423-831 [42993]
    3. 1cmw
      1. region a:423-832 [42994]
    4. 1qss
      protein/DNA complex; complexed with ddg, dg3, mg; mutant
      1. region a:423-831 [42990]
    5. 1jxe
      1. region a:423-832 [42998]
    6. 3ktq
      complexed with ctp, ddc, mg
      1. region a:423-831 [42989]
    7. 1bgx
      1. region t:423-832 [42992]
    8. 1taq
      complexed with bgl, zn; mutant
      1. region a:423-832 [42991]
    9. 2ktq
      complexed with ctp, ddc, mg
      1. region a:423-832 [42995]
    10. 5ktq
      complexed with ctp
      1. region a:423-832 [42997]
    11. 1ktq
      1. region a:423-832 [42996]
    12. 4ktq
      complexed with ddc
      1. region a:423-832 [42999]
    13. 1tau
      protein/DNA complex; complexed with bgl, zn
      1. region a:423-832 [43000]
  3. Bacillus stearothermophilus, newly identified strain as yet unnamed [TaxId: 1422] [56677] (45)
    SQ Q5KWC1 299-878 # 99% sequence identity; Geobacillus kaustophilus TaxID:1462
    SQ Q45458 298-876 # 88% sequence identity
    1. 2hhv
      automatically matched to d1l3sa2
      complexed with 6og, mg, so4, suc
      1. region a:469-876 [136515]
    2. 1u4b
      complexed with 8og, mg, so4, suc
      1. region a:469-876 [107665]
    3. 1nk4
      complexed with mg, so4, suc
      1. region a:469-876 [91924]
    4. 1njx
      complexed with mg, so4, suc
      1. region a:469-876 [91916]
    5. 1l3s
      complexed with mg, so4, suc
      1. region a:469-876 [84522]
    6. 1nk0
      complexed with mes, so4, suc
      1. region a:469-876 [91922]
    7. 1l3t
      complexed with mg, so4, suc
      1. region a:469-876 [84524]
    8. 1l3v
      complexed with mg, so4, suc
      1. region a:469-876 [84528]
    9. 1nkc
      complexed with mg, so4, suc
      1. region a:469-876 [91938]
    10. 2hhu
      automatically matched to d1l3sa2
      complexed with 6og, dcp, mg, so4, suc
      1. region a:469-876 [136513]
    11. 1l3u
      complexed with mg, so4, suc
      1. region a:469-876 [84526]
    12. 2hhq
      automatically matched to d1l3sa2
      complexed with 6og, mg, so4, suc
      1. region a:469-876 [136507]
    13. 1nke
      complexed with dcp, mg, so4, suc
      1. region a:469-876 [91940]
    14. 2hhw
      automatically matched to d1l3sa2
      complexed with 23t, 6og, ddg, mn, so4, suc; mutant
      1. region a:469-876 [136517]
    15. 2hhs
      automatically matched to d1l3sa2
      complexed with 6og, mg, so4, suc
      1. region a:469-876 [136509]
    16. 2hhw
      automatically matched to d1l3sa2
      complexed with 23t, 6og, ddg, mn, so4, suc; mutant
      1. region d:469-876 [136519]
    17. 1nk8
      complexed with mg, so4, suc
      1. region a:469-876 [91932]
    18. 1nk7
      complexed with mg, so4, suc
      1. region a:469-876 [91930]
    19. 1nk9
      complexed with mg, so4, suc
      1. region a:469-876 [91934]
    20. 1l5u
      complexed with mg, so4, suc
      1. region a:469-876 [84530]
    21. 1njw
      complexed with mg, so4, suc
      1. region a:469-876 [91914]
    22. 2hw3
      automatically matched to d1l3sa2
      complexed with 6og, mg, so4, suc
      1. region a:469-876 [136820]
    23. 2hvi
      automatically matched to d1l3sa2
      complexed with dct, ddg, mg, so4, suc
      1. region a:469-876 [136809]
    24. 2hvi
      automatically matched to d1l3sa2
      complexed with dct, ddg, mg, so4, suc
      1. region d:469-876 [136811]
    25. 1u45
      complexed with 8og, mg, so4, suc
      1. region a:469-876 [107655]
    26. 1xc9
      complexed with bp, mg, so4, suc
      1. region a:469-876 [115112]
    27. 2hht
      automatically matched to d1l3sa2
      complexed with 6og, mg, so4, suc
      1. region a:469-876 [136511]
    28. 1njz
      complexed with mg, so4, suc
      1. region a:469-876 [91920]
    29. 1u47
      complexed with 8og, mg, so4, suc
      1. region a:469-876 [107659]
    30. 1njy
      complexed with mg, so4, suc, ttp
      1. region a:469-876 [91918]
    31. 1nkb
      complexed with mg, so4, suc
      1. region a:469-876 [91936]
    32. 1ua1
      complexed with af, so4
      1. region a:469-876 [107756]
    33. 1nk5
      complexed with mg, so4, suc
      1. region a:469-876 [91926]
    34. 1u48
      complexed with 8og, mg, so4, suc
      1. region a:469-876 [107661]
    35. 1u49
      complexed with 8og, mg, so4, suc
      1. region a:469-876 [107663]
    36. 1nk6
      complexed with so4, suc
      1. region a:469-876 [91928]
    37. 1xwl
      complexed with so4
      1. region a:469-876 [43001]
    38. 2bdp
      protein/DNA complex; complexed with mg, so4
      1. region a:469-876 [43002]
    39. 1ua0
      complexed with af, so4, suc
      1. region a:469-876 [107754]
    40. 4bdp
      protein/DNA complex; complexed with mg, so4
      1. region a:469-876 [43003]
    41. 2hhx
      automatically matched to d1l3sa2
      complexed with 6og, so4, suc
      1. region a:469-876 [136521]
    42. 1lv5
      complexed with dcp, mg, mn, so4; mutant
      1. region a:469-876 [84720]
      2. region b:469-876 [84722]
    43. 2hvh
      automatically matched to d1l3sa2
      complexed with 6og, dct, ddg, mn, so4, suc
      1. region a:469-876 [136805]
    44. 2hvh
      automatically matched to d1l3sa2
      complexed with 6og, dct, ddg, mn, so4, suc
      1. region d:469-876 [136807]
    45. 3bdp
      protein/DNA complex; complexed with 2dt, so4
      1. region a:469-876 [43004]
2. T7 phage DNA polymerase [56678]
  1. Bacteriophage T7 [TaxId: 10760] [56679] (16)
    SQ P00581
    1. 1x9m
      complexed with 2dt, 8fg, mg; mutant
      1. region a:211-704 [115000]
    2. 1tk5
      complexed with 1pe, ddg, mes, mg, so4
      1. region a:211-704 [107075]
    3. 1t7p
      protein/DNA complex; complexed with 2da, dg3, mg; mutant
      1. region a:211-704 [43005]
    4. 1x9w
      complexed with 2dt, mg; mutant
      1. region a:211-704 [115009]
    5. 1sl2
      complexed with 2da, dad, mg, ttd; mutant
      1. region a:211-704 [105707]
    6. 1tkd
      complexed with 1pe, 8og, d3t, doc, mes, mg, so4
      1. region a:211-704 [107087]
    7. 1skr
      complexed with 2da, dad, mg; mutant
      1. region a:211-704 [105685]
    8. 1sl1
      complexed with 2da, mg, ttd; mutant
      1. region a:211-704 [105704]
    9. 1tk0
      complexed with 1pe, 8og, dct, ddg, mes, mg, so4; mutant
      1. region a:211-704 [107064]
    10. 1tk8
      complexed with 1pe, 2da, 8og, d3t, mes, mg, so4
      1. region a:211-704 [107080]
    11. 1sks
      complexed with 2dt, mg, ttd; mutant
      1. region a:211-704 [105688]
    12. 1skw
      complexed with 2dt, mg; mutant
      1. region a:211-704 [105695]
    13. 1t8e
      complexed with 2dt, dct, mes, mg, pg4, so4
      1. region a:211-704 [112317]
    14. 1x9s
      complexed with 2dt, mg; mutant
      1. region a:211-704 [115006]
    15. 1zyq
      automatically matched to d1skra2
      complexed with 8og, dad, ddg, mg; mutant
      1. region a:211-704 [125847]
    16. 1sl0
      complexed with 2dt, dad, mg; mutant
      1. region a:211-704 [105698]
      2. region c:211-704 [105701]
3. Family B DNA polymerase [56680]
  1. Escherichia coli [TaxId: 562] [103399] (1)
    1. 1q8i
      mutant
      1. region a:390-783 [96209]
  2. Bacteriophage RB69 [TaxId: 12353] [56681] (27)
    1. 1ih7
      complexed with gmp, k
      1. region a:376-903 [62376]
    2. 3cq8
      automatically matched to d1clqa2
      complexed with ca, gol, na, ttp; mutant
      1. region a:376-902 [156928]
    3. 1ig9
      complexed with ca, doc, ttp; mutant
      1. region a:376-901 [62368]
    4. 2dy4
      automatically matched to d1clqa2
      complexed with ctg; mutant
      1. region a:376-902 [131883]
    5. 2dy4
      automatically matched to d1clqa2
      complexed with ctg; mutant
      1. region b:376-902 [131885]
    6. 2dy4
      automatically matched to d1clqa2
      complexed with ctg; mutant
      1. region c:376-900 [131887]
    7. 2dy4
      automatically matched to d1clqa2
      complexed with ctg; mutant
      1. region d:376-897 [131889]
    8. 2ozm
      automatically matched to d1clqa2
      complexed with 3dr, ddg, mg, n5p; mutant
      1. region a:376-903 [149116]
    9. 1clq
      1. region a:376-903 [43006]
    10. 2ozs
      automatically matched to d1clqa2
      complexed with ddg, dtp, mg; mutant
      1. region a:376-903 [149128]
    11. 2p5g
      automatically matched to d1clqa2
      complexed with 3dr; mutant
      1. region a:376-903 [149241]
    12. 2p5g
      automatically matched to d1clqa2
      complexed with 3dr; mutant
      1. region b:376-899 [149243]
    13. 2p5g
      automatically matched to d1clqa2
      complexed with 3dr; mutant
      1. region c:376-898 [149245]
    14. 2p5g
      automatically matched to d1clqa2
      complexed with 3dr; mutant
      1. region d:376-899 [149247]
    15. 1q9y
      complexed with 8og, ca, dcp, doc; mutant
      1. region a:376-902 [96337]
    16. 1q9x
      complexed with 3dr, ca, dgp, doc; mutant
      1. region a:376-903 [96329]
      2. region b:376-903 [96331]
      3. region c:376-903 [96333]
      4. region d:376-903 [96335]
    17. 2p5o
      automatically matched to d1clqa2
      complexed with 3dr; mutant
      1. region a:376-902 [139499]
    18. 2p5o
      automatically matched to d1clqa2
      complexed with 3dr; mutant
      1. region b:376-901 [139501]
    19. 2p5o
      automatically matched to d1clqa2
      complexed with 3dr; mutant
      1. region c:376-898 [139503]
    20. 2p5o
      automatically matched to d1clqa2
      complexed with 3dr; mutant
      1. region d:376-896 [139505]
    21. 2oyq
      automatically matched to d1clqa2
      complexed with 3dr, mg, n5i, n5p; mutant
      1. region a:376-903 [149071]
    22. 2oyq
      automatically matched to d1clqa2
      complexed with 3dr, mg, n5i, n5p; mutant
      1. region b:376-899 [149073]
    23. 2oyq
      automatically matched to d1clqa2
      complexed with 3dr, mg, n5i, n5p; mutant
      1. region c:376-900 [149075]
    24. 2oyq
      automatically matched to d1clqa2
      complexed with 3dr, mg, n5i, n5p; mutant
      1. region d:376-898 [149077]
    25. 1waj
      complexed with 5gp
      1. region a:376-903 [43007]
    26. 1waf
      complexed with gmp
      1. region a:376-903 [43008]
      2. region b:376-903 [43009]
    27. 2atq
      automatically matched to d1clqa2
      complexed with gdp, zn; mutant
      1. region a:376-903 [127304]
  3. Archaeon Thermococcus gorgonarius [TaxId: 71997] [56682] (3)
    1. 1tgo
      1. region a:348-773 [43010]
    2. 2vwk
      automatically matched to d1tgoa2
      complexed with na, so4; mutant
      1. region a:348-773 [153678]
    3. 2vwj
      automatically matched to d1qqca2
      complexed with k; mutant
      1. region a:348-756 [153676]
  4. Archaeon Thermococcus sp., 9on-7 [TaxId: 35749] [56683] (1)
    1. 1qht
      mutant
      1. region a:348-750 [43011]
  5. Archaeon Desulfurococcus tok [TaxId: 108142] [56684] (2)
    1. 1d5a
      complexed with mg, so4
      1. region a:348-756 [43012]
    2. 1qqc
      complexed with mg, so4
      1. region a:348-756 [43013]
  6. Archaeon Pyrococcus kodakaraensis [TaxId: 311400] [56685] (2)
    SQ P56689 1-758 # 93% sequence identity; Thermococcus kodakarensis KOD1 TaxID: 69014
    1. 1wn7
      complexed with gol, ni; mutant
      1. region a:348-756 [121089]
    2. 1wns
      1. region a:348-758 [109438]
  7. Sulfolobus solfataricus [TaxId: 2287] [118192] (1)
    SQ P26811 40-864
    1. 1s5j
      complexed with mg, sul
      1. region a:450-864 [112041]
4. phi29 DNA polymerase [118193]
  1. Bacteriophage phi-29 [TaxId: 10756] [118194] (18)
    SQ P03680
    1. 2py5
      automatically matched to d1xhxa2
      complexed with edo; mutant
      1. region a:188-575 [149929]
    2. 2py5
      automatically matched to d1xhxa2
      complexed with edo; mutant
      1. region b:188-575 [149931]
    3. 2pyj
      automatically matched to d1xhxa2
      complexed with dgt, doc, edo, mg, mn; mutant
      1. region a:188-575 [149944]
    4. 2pyj
      automatically matched to d1xhxa2
      complexed with dgt, doc, edo, mg, mn; mutant
      1. region b:188-575 [149946]
    5. 2pyl
      automatically matched to d1xhxa2
      complexed with 2da, edo, mg, ttp; mutant
      1. region a:188-575 [149948]
    6. 1xhx
      complexed with mg, so4; mutant
      1. region a:188-575 [115306]
    7. 1xi1
      complexed with mg; mutant
      1. region a:188-575 [115310]
    8. 1xhz
      mutant
      1. region a:188-575 [115308]
    9. 2pzs
      automatically matched to d1xhxa2
      mutant
      1. region a:188-575 [149966]
    10. 2pzs
      automatically matched to d1xhxa2
      mutant
      1. region b:188-575 [149968]
    11. 2pzs
      automatically matched to d1xhxa2
      mutant
      1. region c:188-575 [149970]
    12. 2pzs
      automatically matched to d1xhxa2
      mutant
      1. region d:188-574 [149972]
    13. 2ex3
      complexed with pb; mutant
      1. region a:188-575 [132499]
    14. 2ex3
      automatically matched to 2EX3 A:188-575
      complexed with pb; mutant
      1. region c:188-575 [132502]
    15. 2ex3
      automatically matched to 2EX3 A:188-575
      complexed with pb; mutant
      1. region e:188-575 [132505]
    16. 2ex3
      automatically matched to 2EX3 A:188-575
      complexed with pb; mutant
      1. region g:188-575 [132508]
    17. 2ex3
      automatically matched to 2EX3 A:188-575
      complexed with pb; mutant
      1. region i:188-575 [132511]
    18. 2ex3
      automatically matched to 2EX3 A:188-575
      complexed with pb; mutant
      1. region k:188-575 [132514]
Lesion bypass DNA polymerase (Y-family), catalytic domain [100888] (6)
contains a distinct 'fingers' domain possibly related to the C-terminal subdomain of hypothetical protein Ta1206 (1qw2)
1. DinB homolog (DBH) [100889]
  1. Archaeon Sulfolobus solfataricus, DNA polymerase IV [TaxId: 2287] [100890] (62)
    1. 1jx4
      complexed with adi, ca, mg
      1. region a:1-240 [90379]
    2. 1s9f
      automatically matched to d1jx4a2
      complexed with ca, ddy, mg
      1. region a:2-240 [118914]
    3. 1s9f
      automatically matched to d1jx4a2
      complexed with ca, ddy, mg
      1. region b:2-240 [118916]
    4. 1s9f
      automatically matched to d1jx4a2
      complexed with ca, ddy, mg
      1. region c:2-240 [118918]
    5. 1s9f
      automatically matched to d1jx4a2
      complexed with ca, ddy, mg
      1. region d:2-240 [118920]
    6. 2jej
      automatically matched to d1jx4a2
      complexed with bzg, ca, dgt
      1. region a:2-240 [138285]
    7. 1rys
      complexed with atp, ca, edo, na
      1. region a:1-240 [98112]
      2. region b:1-240 [98114]
    8. 2asd
      automatically matched to d1jx4a2
      complexed with 8og, ca, dcp, ddg
      1. region a:2-240 [127249]
    9. 2asd
      automatically matched to d1jx4a2
      complexed with 8og, ca, dcp, ddg
      1. region b:1002-1240 [127251]
    10. 2rdi
      automatically matched to d1jx4a2
      complexed with gol, peg
      1. region a:1-240 [151929]
    11. 1s10
      complexed with ca, dcp
      1. region a:1-240 [98328]
    12. 1s0o
      complexed with ca, mg, ttp
      1. region a:1-240 [98297]
      2. region b:1-240 [98299]
    13. 2imw
      automatically matched to d1jx4a2
      complexed with ca, dad, edo
      1. region p:2-240 [137520]
    14. 2agq
      automatically matched to d1jx4a2
      complexed with ca, doc, dtp, mg
      1. region a:2-240 [126736]
    15. 2bq3
      automatically matched to d1jx4a2
      complexed with ca, gne
      1. region a:2-240 [128960]
    16. 2uvv
      automatically matched to d1jx4a2
      complexed with 8og, ca, dgt; mutant
      1. region a:1-240 [139985]
    17. 2br0
      automatically matched to d1jx4a2
      complexed with ca, dg3, gne
      1. region a:2-240 [128974]
    18. 1jxl
      complexed with bro, ca, dg3, edo, mg
      1. region a:1-240 [90381]
    19. 1n48
      complexed with 3dr, atp, ca
      1. region a:1-240 [91616]
    20. 2uvw
      automatically matched to d1jx4a2
      complexed with 8og, ca, dgt; mutant
      1. region a:1-240 [139987]
    21. 2rdj
      automatically matched to d1jx4a2
      complexed with ca, gol, tmp
      1. region a:1-240 [151931]
    22. 2rdj
      automatically matched to d1jx4a2
      complexed with ca, gol, tmp
      1. region b:1-240 [151933]
    23. 2jef
      automatically matched to d1jx4a2
      complexed with bzg, ca, dgt, doc
      1. region a:2-240 [138279]
    24. 2c28
      automatically matched to d1jx4a2
      complexed with 8og, ca, dg3
      1. region a:2-240 [129661]
    25. 2jeg
      automatically matched to d1jx4a2
      complexed with bzg, ca, dgt, doc
      1. region a:2-240 [138281]
    26. 2ibk
      automatically matched to d1jx4a2
      complexed with bap, ca, edo, gol, pop
      1. region a:1-240 [147599]
    27. 1ryr
      complexed with atp, ca
      1. region a:1-240 [98110]
    28. 2bqr
      automatically matched to d1jx4a2
      complexed with ca, dtp, gne
      1. region a:2-240 [128966]
    29. 1s97
      complexed with ca, dct
      1. region a:1-240 [98743]
      2. region b:1-240 [98745]
      3. region c:1-240 [98747]
      4. region d:1-240 [98749]
    30. 2j6u
      automatically matched to d1jx4a2
      complexed with 6og, ca, dgt
      1. region a:5-243 [138094]
    31. 1n56
      complexed with 3dr, atp, ca, mg
      1. region a:1-240 [91681]
      2. region b:1-240 [91683]
    32. 2r8i
      automatically matched to d1jx4a2
      complexed with ca, dtp, p; mutant
      1. region a:1-240 [151722]
    33. 2bqu
      automatically matched to d1jx4a2
      complexed with ca, dad, gne
      1. region a:2-240 [128968]
    34. 2jei
      automatically matched to d1jx4a2
      complexed with bzg, ca, dgt
      1. region a:2-240 [138283]
    35. 1s0m
      complexed with atp, bpa, ca, mg
      1. region a:1-240 [98291]
      2. region b:1-240 [98293]
    36. 2r8h
      automatically matched to d1jx4a2
      complexed with ca, dgt, p; mutant
      1. region a:1-240 [151720]
    37. 2j6s
      automatically matched to d1jx4a2
      complexed with 6og, ca, dtp
      1. region a:1-240 [138090]
    38. 2c22
      automatically matched to d1jx4a2
      complexed with 8og, ca, dgt
      1. region a:2-240 [129656]
    39. 2agp
      automatically matched to d1jx4a2
      complexed with ca, dgt, doc, mg
      1. region a:2-240 [126732]
    40. 2agp
      automatically matched to d1jx4a2
      complexed with ca, dgt, doc, mg
      1. region b:2-240 [126734]
    41. 2j6t
      automatically matched to d1jx4a2
      complexed with 6og, ca, dtp
      1. region a:2-240 [138092]
    42. 2r8g
      automatically matched to d1jx4a2
      complexed with ca, dgt, p; mutant
      1. region a:1-240 [151718]
    43. 2ago
      automatically matched to d1jx4a2
      complexed with ca, mg, pop
      1. region a:2-240 [126730]
    44. 2asj
      automatically matched to d1jx4a2
      complexed with ca, ddg
      1. region a:2-240 [127255]
    45. 2asj
      automatically matched to d1jx4a2
      complexed with ca, ddg
      1. region b:1002-1240 [127257]
    46. 2c2d
      automatically matched to d1jx4a2
      complexed with 8og, ca, dtp
      1. region a:2-240 [129665]
    47. 2uvu
      automatically matched to d1jx4a2
      complexed with 8og, ca, dgt; mutant
      1. region a:1-240 [139983]
    48. 1s0n
      complexed with ca, dcp
      1. region a:1-240 [98295]
    49. 2va2
      automatically matched to d1jx4a2
      complexed with ca, dct, dft
      1. region a:1-240 [152816]
    50. 2va2
      automatically matched to d1jx4a2
      complexed with ca, dct, dft
      1. region b:1-240 [152818]
    51. 2asl
      automatically matched to d1jx4a2
      complexed with 8og, ca, doc
      1. region a:2-240 [127259]
    52. 2asl
      automatically matched to d1jx4a2
      complexed with 8og, ca, doc
      1. region b:1002-1240 [127261]
    53. 2atl
      automatically matched to d1jx4a2
      complexed with ca, dcp, ddg
      1. region a:2-240 [127297]
    54. 2atl
      automatically matched to d1jx4a2
      complexed with ca, dcp, ddg
      1. region b:1002-1240 [127299]
    55. 2c2r
      automatically matched to d1jx4a2
      complexed with 8og, ca, dct, doc
      1. region a:2-240 [129681]
    56. 2uvr
      automatically matched to d1jx4a2
      complexed with 8og, ca, dgt; mutant
      1. region a:1-240 [139981]
    57. 2va3
      automatically matched to d1jx4a2
      complexed with ca, dft, dgt
      1. region a:1-240 [152820]
    58. 2c2e
      automatically matched to d1jx4a2
      complexed with 8og, ca, dcp
      1. region a:2-240 [129667]
    59. 2v9w
      automatically matched to d1jx4a2
      complexed with ca, dct, dft
      1. region a:1-240 [152812]
    60. 2v9w
      automatically matched to d1jx4a2
      complexed with ca, dct, dft
      1. region b:1-240 [152814]
    61. 2au0
      automatically matched to d1jx4a2
      complexed with ca, ddg
      1. region a:2-240 [127319]
    62. 2au0
      automatically matched to d1jx4a2
      complexed with ca, ddg
      1. region b:1002-1240 [127321]
  2. Archaeon Sulfolobus solfataricus [TaxId: 2287] [100891] (3)
    1. 1im4
      "palm" and "fingers" domains only
      complexed with so4
      1. chain a [62581]
    2. 1k1s
      mutant
      1. region a:1-239 [90387]
    3. 1k1q
      mutant
      1. region a:1-239 [90383]
      2. region b:1-239 [90385]
  3. Sulfolobus acidocaldarius Brock et al. 1972 (Sulfolobus acidocaldarius) [TaxId: 2285] [160954] (3)
    1. 3bq1
      automatically matched to d1k1qa2
      complexed with ca, dg3
      1. region a:1-239 [155494]
    2. 3bq0
      automatically matched to d1k1qa2
      complexed with ca
      1. region a:1-239 [155492]
    3. 3bq2
      automatically matched to d1k1qa2
      complexed with ca
      1. region a:1-239 [155496]
2. DNA polymerase eta [100892]
  1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [100893] (5)
    1. 1jih
      1. region a:1-389 [90375]
      2. region b:1-389 [90377]
    2. 2r8j
      automatically matched to d1jiha2
      complexed with ca, cpt, dcp
      1. region a:1-389 [151724]
    3. 2r8j
      automatically matched to d1jiha2
      complexed with ca, cpt, dcp
      1. region b:1-389 [151726]
    4. 2r8k
      automatically matched to d1jiha2
      complexed with 2oa, ca, cpt
      1. region a:1-389 [151728]
    5. 2r8k
      automatically matched to d1jiha2
      complexed with 2oa, ca, cpt
      1. region b:1-389 [151730]
3. DNA polymerase iota [111295]
  1. Human (Homo sapiens) [TaxId: 9606] [111296] (8)
    SQ Q9UNA4
    1. 1zet
      automatically matched to d1t3na2
      complexed with bru, doc, mg, ttp
      1. region a:27-299 [124998]
    2. 2dpi
      automatically matched to d1t3na2
      complexed with dcp, doc, eda, mg
      1. region a:27-299 [131613]
    3. 2dpj
      automatically matched to d1t3na2
      complexed with doc, eda, mg, ttp
      1. region a:27-299 [131615]
    4. 2flp
      automatically matched to d1t3na2
      complexed with doc
      1. region a:27-299 [133746]
    5. 1t3n
      complexed with doc, mg, ttp
      1. region a:27-299 [106364]
      2. region b:447-719 [106366]
    6. 2alz
      automatically matched to d1t3na2
      complexed with dcp, doc, mg
      1. region a:27-299 [126995]
    7. 2fln
      automatically matched to d1t3na2
      complexed with doc
      1. region a:27-299 [133732]
    8. 2fll
      automatically matched to d1t3na2
      complexed with doc, mg, ttp
      1. region a:27-299 [133728]
4. DNA polymerase kappa [111297]
  1. Human (Homo sapiens) [TaxId: 9606] [111298] (1)
    SQ Q9UBT6 71-517
    1. 1t94
      1. region a:75-407 [106702]
      2. region b:75-407 [106704]
Reverse transcriptase [56686] (3)
1. MMLV reverse transcriptase [56687]
  1. Moloney murine leukemia virus, MoMLV [TaxId: 11801] [56688] (22)
    SQ P03355 RE 144-594
    1. 1ztw
      automatically matched to d1d0ea_
      1. region a:24-278 [125657]
    2. 2fjx
      automatically matched to d1d0ea_
      complexed with hxl
      1. region a:24-278 [133625]
    3. 1ztt
      automatically matched to d1d0ea_
      complexed with nt
      1. region a:24-278 [125656]
    4. 1mml
      fragment of "palm" and "fingers" domains
      1. chain a [43015]
    5. 1i6j
      fragment of "palm" and "fingers" domains
      1. chain a [61845]
    6. 2r2t
      automatically matched to d1d0ea_
      1. region a:24-278 [151539]
    7. 2fjw
      automatically matched to d1d0ea_
      mutant
      1. region a:24-278 [133624]
    8. 2fjv
      automatically matched to d1d0ea_
      complexed with hxl
      1. region a:24-278 [133623]
    9. 2fvr
      automatically matched to d1d0ea_
      1. region a:24-278 [134223]
    10. 1n4l
      fragment of "palm" and "fingers" domains
      1. chain a [85323]
    11. 2r2r
      automatically matched to d1d0ea_
      1. region a:24-278 [151537]
    12. 1nnd
      mutant
      1. chain a [92002]
    13. 2fvp
      automatically matched to d1d0ea_
      1. region a:24-278 [134221]
    14. 1qaj
      fragment of "palm" and "fingers" domains
      protein/DNA complex
      1. chain a [43016]
      2. chain b [43017]
    15. 2r2u
      automatically matched to d1d0ea_
      complexed with btz
      1. region a:24-278 [151540]
    16. 2fvq
      automatically matched to d1d0ea_
      1. region a:24-278 [134222]
    17. 2fvs
      automatically matched to d1d0ea_
      1. region a:24-278 [134224]
    18. 1d1u
      fragment of "palm" and "fingers" domains
      protein/DNA complex
      1. chain a [43018]
    19. 1qai
      fragment of "palm" and "fingers" domains
      protein/DNA complex; complexed with hg
      1. chain a [43019]
      2. chain b [43020]
    20. 2r2s
      automatically matched to d1d0ea_
      complexed with 3co, blb
      1. region a:24-278 [151538]
    21. 1d0e
      fragment of "palm" and "fingers" domains
      protein/DNA complex
      1. chain a [43021]
      2. chain b [43022]
    22. 1rw3
      'full length enzyme' fragment
      mutant
      1. chain a [105112]
2. HIV-1 reverse transcriptase [56689]
  1. Human immunodeficiency virus type 1 [TaxId: 11676] [56690] (191)
    SQ P04585 159-692 # chain A coverage; chain B is shorter: 162-582 ! SQ P03366 186-725 # chain A coverage; chain B coverage: 156-584 ! SQ P04585 158-698 # chain A coverage; chain B is shorter: 159-595
    1. 2zd1
      automatically matched to d1bqmb_
      complexed with edo, so4, t27; mutant
      1. region b:5-428 [154388]
    2. 3dlk
      automatically matched to d1bqmb_
      complexed with so4; mutant
      1. region b:6-428 [157774]
    3. 3bgr
      automatically matched to d1bqmb_
      complexed with edo, t27; mutant
      1. region b:5-428 [155252]
    4. 1har
      fragment of "palm" and "fingers" domains
      1. chain a [43025]
    5. 3dlg
      automatically matched to d1c1cb_
      complexed with gwe, po4
      1. region b:7-428 [157773]
    6. 1vrt
      complexed with cya, mg, nev
      1. region a:4-429 [43023]
    7. 1vrt
      complexed with cya, mg, nev
      1. chain b [43024]
    8. 1s1t
      complexed with po4, uc1; mutant
      1. region a:3-429 [105206]
      2. region b:4-429 [105207]
    9. 2rki
      automatically matched to d1c1cb_
      complexed with cl, gol, mg, so4, tt1
      1. region a:5-440 [152109]
    10. 2rki
      automatically matched to d1c1cb_
      complexed with cl, gol, mg, so4, tt1
      1. region b:6-428 [152110]
    11. 2ops
      automatically matched to d1c1cb_
      complexed with hbq, po4; mutant
      1. region a:5-440 [148968]
    12. 2ops
      automatically matched to d1c1cb_
      complexed with hbq, po4; mutant
      1. region b:6-440 [148969]
    13. 1c1b
      complexed with gca
      1. chain b [43077]
    14. 1c1b
      complexed with gca
      1. region a:1-429 [43076]
    15. 3dle
      automatically matched to d1c1cb_
      complexed with gfa
      1. region b:5-428 [157772]
    16. 3dol
      automatically matched to d1c1cb_
      complexed with gwi, po4; mutant
      1. region b:5-428 [157820]
    17. 1vru
      complexed with aap, cya
      1. chain b [43027]
    18. 1vru
      complexed with aap, cya
      1. region a:3-429 [43026]
    19. 1jla
      complexed with tnk; mutant
      1. region a:1-429 [66834]
    20. 1jla
      complexed with tnk; mutant
      1. chain b [66835]
    21. 1rt1
      complexed with mkc
      1. region a:1-429 [43030]
      2. region b:6-431 [43031]
    22. 2be2
      automatically matched to d1bqmb_
      complexed with gol, mn, r22, suc; mutant
      1. region b:4-427 [128348]
    23. 3di6
      automatically matched to d1c1cb_
      complexed with pdz
      1. region a:5-440 [157743]
    24. 3di6
      automatically matched to d1c1cb_
      complexed with pdz
      1. region b:5-428 [157744]
    25. 1rth
      complexed with cya, u05
      1. region a:1-429 [43028]
      2. region b:3-431 [43029]
    26. 2opp
      automatically matched to d1c1cb_
      complexed with hbq, mg, po4
      1. region b:5-431 [139213]
    27. 1eet
      complexed with bfu; mutant
      1. region a:1-429 [43078]
    28. 1eet
      complexed with bfu; mutant
      1. chain b [43079]
    29. 2opp
      automatically matched to d1c1cb_
      complexed with hbq, mg, po4
      1. region a:5-440 [145725]
    30. 2rf2
      automatically matched to d1c1cb_
      complexed with mrx
      1. region a:5-440 [151993]
    31. 2rf2
      automatically matched to d1c1cb_
      complexed with mrx
      1. region b:5-428 [151994]
    32. 1jkh
      complexed with efz; mutant
      1. chain b [66799]
    33. 1jkh
      complexed with efz; mutant
      1. region a:2-429 [66798]
    34. 1c0u
      complexed with bm5
      1. chain b [43085]
    35. 1ikx
      complexed with pnu; mutant
      1. region a:1-429 [62534]
    36. 1ikx
      complexed with pnu; mutant
      1. chain b [62535]
    37. 1c0u
      complexed with bm5
      1. region a:1-429 [43084]
    38. 1rt2
      complexed with tnk
      1. region a:1-429 [43032]
    39. 1rt2
      complexed with tnk
      1. chain b [43033]
    40. 1tkt
      complexed with h12, mg, po4
      1. region a:7-427 [112483]
      2. region b:7-427 [112484]
    41. 1rev
      complexed with mg, trb
      1. region a:4-429 [43036]
    42. 1rev
      complexed with mg, trb
      1. chain b [43037]
    43. 1c0t
      complexed with bm1
      1. region a:4-429 [43082]
    44. 1c0t
      complexed with bm1
      1. chain b [43083]
    45. 1fk9
      complexed with efz
      1. region a:4-429 [43080]
    46. 1fk9
      complexed with efz
      1. chain b [43081]
    47. 1klm
      complexed with spp
      1. region a:2-429 [43038]
    48. 1klm
      complexed with spp
      1. chain b [43039]
    49. 1c1c
      complexed with 612
      1. region a:1-429 [43086]
    50. 1c1c
      complexed with 612
      1. chain b [43087]
    51. 2b6a
      automatically matched to d1bqmb_
      complexed with t50; mutant
      1. region b:1-427 [127975]
    52. 1lwc
      complexed with csd, nvp, po4; mutant
      1. chain b [78264]
    53. 1lwc
      complexed with csd, nvp, po4; mutant
      1. region a:4-429 [78263]
    54. 1s1w
      complexed with uc1; mutant
      1. region a:4-429 [105215]
      2. region b:5-428 [105216]
    55. 1jlg
      complexed with uc1; mutant
      1. chain b [66850]
    56. 1jlg
      complexed with uc1; mutant
      1. region a:2-429 [66849]
    57. 1s1v
      complexed with tnk; mutant
      1. region a:1-429 [105212]
      2. region b:6-429 [105213]
    58. 1hmv
      complexed with mg
      1. region a:1-429 [43046]
    59. 1hmv
      duplicate of 1HMV A:1-429
      complexed with mg
      1. region c:1-429 [118503]
    60. 1hmv
      duplicate of 1HMV A:1-429
      complexed with mg
      1. region e:1-429 [118506]
    61. 1hmv
      duplicate of 1HMV A:1-429
      complexed with mg
      1. region g:1-429 [118509]
    62. 1hmv
      complexed with mg
      1. chain b [43047]
    63. 1hmv
      duplicate of 1HMV B
      complexed with mg
      1. chain d [118504]
    64. 1hmv
      duplicate of 1HMV B
      complexed with mg
      1. chain f [118507]
    65. 1hmv
      duplicate of 1HMV B
      complexed with mg
      1. chain h [118510]
    66. 1rtj
      complexed with cya
      1. region a:1-429 [43034]
      2. region b:2-431 [43035]
    67. 1tkx
      complexed with gwb
      1. region a:7-427 [112486]
      2. region b:7-427 [112487]
    68. 3drp
      automatically matched to d1c1cb_
      complexed with r8e
      1. region a:5-440 [157830]
    69. 3drp
      automatically matched to d1c1cb_
      complexed with r8e
      1. region b:6-428 [157831]
    70. 1lwe
      complexed with csd, nvp, po4; mutant
      1. chain b [78269]
    71. 1ep4
      complexed with s11
      1. region a:4-429 [43092]
    72. 1ep4
      complexed with s11
      1. chain b [43093]
    73. 1lwe
      complexed with csd, nvp, po4; mutant
      1. region a:1-429 [78268]
    74. 1dtt
      complexed with ftc
      1. chain b [43089]
    75. 1dtt
      complexed with ftc
      1. region a:1-429 [43088]
    76. 1tl3
      complexed with h20, po4
      1. region a:7-427 [112497]
      2. region b:7-427 [112498]
    77. 1tkz
      complexed with h16, po4
      1. region a:7-427 [112491]
      2. region b:7-427 [112492]
    78. 1jlf
      complexed with nvp; mutant
      1. chain b [66847]
    79. 1jlf
      complexed with nvp; mutant
      1. region a:1-429 [66846]
    80. 1ikw
      complexed with efz; mutant
      1. region a:1-429 [62531]
    81. 1ikw
      complexed with efz; mutant
      1. chain b [62532]
    82. 1iky
      complexed with msd; mutant
      1. chain b [62538]
    83. 1iky
      complexed with msd; mutant
      1. region a:1-429 [62537]
    84. 1rt6
      complexed with po4, uc3
      1. region a:1-429 [43090]
      2. region b:6-431 [43091]
    85. 1fko
      complexed with efz; mutant
      1. region a:1-429 [43094]
    86. 1fko
      complexed with efz; mutant
      1. chain b [43095]
    87. 1rt4
      complexed with po4, uc1
      1. chain b [43101]
    88. 1rt4
      complexed with po4, uc1
      1. region a:1-429 [43100]
    89. 1rt5
      complexed with po4, uc2
      1. chain b [43103]
    90. 1rt5
      complexed with po4, uc2
      1. region a:1-429 [43102]
    91. 1rti
      complexed with cya, hef
      1. region a:1-429 [43042]
      2. region b:5-431 [43043]
    92. 3dm2
      automatically matched to d1fkpb_
      complexed with gwe, po4; mutant
      1. region b:7-428 [157803]
    93. 2opq
      automatically matched to d1s1tb1
      complexed with hbq, po4; mutant
      1. region b:5-428 [139214]
    94. 1jlb
      complexed with nvp; mutant
      1. region a:1-429 [66837]
    95. 1jlb
      complexed with nvp; mutant
      1. chain b [66838]
    96. 1lw0
      complexed with csd, nvp, po4; mutant
      1. region a:4-429 [78249]
    97. 1lw0
      complexed with csd, nvp, po4; mutant
      1. chain b [78250]
    98. 1lwf
      complexed with csd, nvp; mutant
      1. chain b [78272]
    99. 1lwf
      complexed with csd, nvp; mutant
      1. region a:1-429 [78271]
    100. 1dlo
      mutant
      1. chain b [43041]
    101. 1dlo
      mutant
      1. region a:1-429 [43040]
    102. 1s1x
      complexed with nvp; mutant
      1. region a:2-429 [105218]
      2. region b:6-428 [105219]
    103. 1dtq
      complexed with fpt
      1. chain b [43097]
    104. 1dtq
      complexed with fpt
      1. region a:4-429 [43096]
    105. 3c6t
      automatically matched to d1c1cb_
      complexed with m14
      1. region a:5-440 [155989]
    106. 3c6t
      automatically matched to d1c1cb_
      complexed with m14
      1. region b:6-428 [155990]
    107. 1fkp
      complexed with nvp; mutant
      1. chain b [43099]
    108. 1fkp
      complexed with nvp; mutant
      1. region a:1-429 [43098]
    109. 1tl1
      complexed with h18, po4
      1. region a:7-427 [112494]
      2. region b:7-427 [112495]
    110. 1tv6
      complexed with cp9
      1. region a:1-429 [107348]
      2. region b:6-428 [107349]
    111. 1jlq
      complexed with sbn
      1. region a:1-429 [63174]
    112. 1jlq
      complexed with sbn
      1. chain b [63175]
    113. 1s9e
      complexed with adb; mutant
      1. region a:1-429 [98753]
    114. 1s9e
      complexed with adb; mutant
      1. chain b [98754]
    115. 1lw2
      complexed with csd, po4, u05; mutant
      1. chain b [78253]
    116. 1lw2
      complexed with csd, po4, u05; mutant
      1. region a:1-429 [78252]
    117. 1r0a
      complexed with 2da, glc, gol, mg
      1. region a:1-429 [104677]
      2. region b:1-429 [104678]
    118. 1ikv
      complexed with efz; mutant
      1. region a:1-429 [62528]
    119. 1ikv
      complexed with efz; mutant
      1. chain b [62529]
    120. 2vg5
      automatically matched to d1c1bb_
      complexed with nnc
      1. region b:1005-1427 [153031]
    121. 2ze2
      automatically matched to d1bqmb_
      complexed with t27; mutant
      1. region b:5-428 [154402]
    122. 3dok
      automatically matched to d1fkpb_
      complexed with gwj, po4; mutant
      1. region b:7-428 [157819]
    123. 1rt3
      complexed with u05; mutant
      1. region a:2-429 [43052]
    124. 1rt3
      complexed with u05; mutant
      1. chain b [43053]
    125. 1jlc
      complexed with ftc; mutant
      1. region a:1-429 [66840]
    126. 1jlc
      complexed with ftc; mutant
      1. chain b [66841]
    127. 3c6u
      automatically matched to d1c1cb_
      complexed with m22
      1. region a:5-440 [155991]
    128. 3c6u
      automatically matched to d1c1cb_
      complexed with m22
      1. region b:6-428 [155992]
    129. 1hqe
      mutant
      1. chain b [61132]
    130. 1hqe
      mutant
      1. region a:1-429 [61131]
    131. 1s9g
      complexed with abz; mutant
      1. region a:1-429 [98756]
    132. 1s9g
      complexed with abz; mutant
      1. chain b [98757]
    133. 1s1u
      complexed with nvp; mutant
      1. region a:4-429 [105209]
      2. region b:5-428 [105210]
    134. 1rt7
      complexed with po4, uc4
      1. region a:4-429 [43104]
      2. region b:6-431 [43105]
    135. 2vg7
      automatically matched to d1c1bb_
      complexed with nni
      1. region b:1005-1427 [153033]
    136. 1hni
      complexed with aaa; mutant
      1. chain b [43045]
    137. 1hni
      complexed with aaa; mutant
      1. region a:1-429 [43044]
    138. 1rtd
      complexed with mg, ttp; mutant
      1. region a:1-429 [43048]
      2. region c:1-429 [43050]
    139. 1rtd
      complexed with mg, ttp; mutant
      1. chain b [43049]
      2. chain d [43051]
    140. 3drr
      automatically matched to d1jlab_
      complexed with r8e; mutant
      1. region a:6-440 [157832]
    141. 3drr
      automatically matched to d1jlab_
      complexed with r8e; mutant
      1. region b:6-428 [157833]
    142. 1jle
      mutant
      1. region a:1-429 [66843]
    143. 1jle
      mutant
      1. chain b [66844]
    144. 2i5j
      automatically matched to d1bqmb_
      complexed with glc, k05, mg, suc; mutant
      1. region b:1-429 [137062]
    145. 1hqu
      complexed with hby; mutant
      1. region a:1-429 [61158]
    146. 1hqu
      complexed with hby; mutant
      1. chain b [61159]
    147. 1qe1
      mutant
      1. region a:1-429 [43054]
    148. 1qe1
      mutant
      1. chain b [43055]
    149. 1s6q
      complexed with tpb; mutant
      1. region a:1-429 [98602]
    150. 1s6q
      complexed with tpb; mutant
      1. chain b [98603]
    151. 1hpz
      complexed with aap; mutant
      1. chain b [61121]
    152. 1hpz
      complexed with aap; mutant
      1. region a:1-429 [61120]
    153. 1t03
      complexed with mg, mrg, tfo; mutant
      1. region a:1-429 [99054]
    154. 1t03
      complexed with mg, mrg, tfo; mutant
      1. chain b [99055]
    155. 1sv5
      complexed with 65b; mutant
      1. region a:1-429 [99017]
    156. 1sv5
      complexed with 65b; mutant
      1. chain b [99018]
    157. 2vg6
      automatically matched to d1c1bb_
      complexed with nnb
      1. region b:1005-1427 [153032]
    158. 2hmi
      protein/protein/DNA complex; mutant
      1. chain b [43107]
    159. 2hmi
      less ordered regions are modeled as poly-ALA
      protein/protein/DNA complex; mutant
      1. region a:1-429 [43106]
    160. 1hnv
      complexed with tbo; mutant
      1. region a:1-429 [43056]
    161. 1hnv
      complexed with tbo; mutant
      1. chain b [43057]
    162. 1s6p
      complexed with iet, mg; mutant
      1. region a:1-429 [98599]
    163. 1s6p
      complexed with iet, mg; mutant
      1. chain b [98600]
    164. 2b5j
      automatically matched to d1bqmb_
      complexed with 3ac, mn; mutant
      1. region b:1-427 [127902]
    165. 2ban
      automatically matched to d1bqmb_
      complexed with 357, mn; mutant
      1. region b:1-427 [128241]
    166. 1suq
      complexed with 185, mg; mutant
      1. region a:1-429 [99004]
    167. 1suq
      complexed with 185, mg; mutant
      1. chain b [99005]
    168. 1n6q
      complexed with atm, mg, mrg; mutant
      1. chain b [80206]
    169. 1n6q
      complexed with atm, mg, mrg; mutant
      1. region a:1-429 [80205]
    170. 3drs
      automatically matched to d1fkpb_
      complexed with r8d; mutant
      1. region a:5-438 [157834]
    171. 3drs
      automatically matched to d1fkpb_
      complexed with r8d; mutant
      1. region b:5-428 [157835]
    172. 1t05
      complexed with ddg, gol, mg, mrg, tnv; mutant
      1. region a:1-429 [99061]
    173. 1t05
      complexed with ddg, gol, mg, mrg, tnv; mutant
      1. chain b [99062]
    174. 1n5y
      complexed with atm, mg, mrg; mutant
      1. chain b [80059]
    175. 1n5y
      complexed with atm, mg, mrg; mutant
      1. region a:1-429 [80058]
    176. 1uwb
      complexed with tbo; mutant
      1. chain b [43063]
    177. 1uwb
      complexed with tbo; mutant
      1. region a:1-429 [43062]
    178. 1bqm
      complexed with hby; mutant
      1. region a:1-429 [43060]
    179. 1bqm
      complexed with hby; mutant
      1. chain b [43061]
    180. 1tvr
      complexed with tb9; mutant
      1. region a:1-429 [43058]
    181. 1tvr
      complexed with tb9; mutant
      1. chain b [43059]
    182. 1hys
      mutant
      1. chain b [61419]
    183. 1hys
      mutant
      1. region a:1-429 [61418]
    184. 1bqn
      complexed with hby; mutant
      1. region a:1-429 [43064]
    185. 1bqn
      complexed with hby; mutant
      1. chain b [43065]
    186. 3hvt
      complexed with nev
      1. region a:2-429 [43066]
    187. 3hvt
      complexed with nev
      1. chain b [43067]
    188. 1j5o
      mutant
      1. chain b [71570]
    189. 1j5o
      mutant
      1. region a:1-429 [71569]
    190. 1hvu
      protein/RNA complex
      1. region a:1-429 [43068]
      2. region d:1-429 [43070]
      3. region g:1-429 [43072]
      4. region j:1-429 [43074]
    191. 1hvu
      protein/RNA complex
      1. chain b [43069]
      2. chain e [43071]
      3. chain h [43073]
      4. chain k [43075]
  2. Human immunodeficiency virus type 2 [TaxId: 11709] [82840] (2)
    1. 1mu2
      complexed with gol, so4; mutant
      1. chain b [79471]
    2. 1mu2
      complexed with gol, so4; mutant
      1. region a:3-429 [79470]
T7 RNA polymerase [56691] (1)
1. T7 RNA polymerase [56692]
  multidomain; mostly alpha
  1. Bacteriophage T7 [TaxId: 10760] [56693] (11)
    1. 1msw
      elongation complex; shows dramatic conformational changes in the transition from initiation to elongation transcription
      1. chain d [79427]
    2. 1cez
      promoter complex
      1. chain a [43110]
    3. 1qln
      initiation complex
      1. chain a [43111]
    4. 1s77
      complexed with 3da, mg, pop
      1. chain d [98615]
    5. 1aro
      complexed with hg; mutant
      1. chain p [43112]
    6. 1s76
      complexed with apc, mg
      1. chain d [98614]
    7. 1h38
      elongation complex; shows dramatic conformational changes in the transition from initiation to elongation transcription
      1. chain a [76625]
      2. chain b [76626]
      3. chain c [76627]
      4. chain d [76628]
    8. 2pi5
      automatically matched to d1h38a_
      1. region a:6-883 [139701]
    9. 2pi4
      automatically matched to d1h38a_
      complexed with gh3, mg
      1. region a:6-883 [139700]
    10. 4rnp
      1. chain a [43113]
      2. chain b [43114]
      3. chain c [43115]
    11. 1s0v
      complexed with apc, mg
      1. chain a [98305]
      2. chain b [98306]
      3. chain c [98307]
      4. chain d [98308]
RNA-dependent RNA-polymerase [56694] (11)
1. Viral RNA polymerase [56695]
  1. Poliovirus type 1, strain Mahoney [TaxId: 12080] [56696] (13)
    SQ P03300 1748-2208
    1. 1ra6
      complexed with acy, cas; mutant
      1. chain a [104879]
    2. 1ra7
      complexed with acy, cas, gtp; mutant
      1. chain a [104880]
    3. 2im0
      automatically matched to d1ra6a_
      complexed with acy, cas, ctp, na; mutant
      1. region a:1-461 [137502]
    4. 1rdr
      complexed with ca
      1. chain a [43116]
    5. 2im2
      automatically matched to d1ra6a_
      complexed with acy, cas, na, utp; mutant
      1. region a:1-461 [137504]
    6. 1tql
      complexed with acy, cas; mutant
      1. chain a [107235]
    7. 2ilz
      automatically matched to d1ra6a_
      complexed with acy, cas, gtp, mn, na; mutant
      1. region a:1-461 [137501]
    8. 1raj
      mutant
      1. chain a [104881]
    9. 2ily
      automatically matched to d1ra6a_
      complexed with acy, atp, cas, na; mutant
      1. region a:1-461 [137500]
    10. 2im1
      automatically matched to d1ra6a_
      complexed with acy, cas, ctp, mn, na; mutant
      1. region a:1-461 [137503]
    11. 2ijd
      automatically matched to d1ra6a_
      complexed with so4, zn; mutant
      1. region 1:184-644 [137475]
    12. 2ijd
      automatically matched to d1ra6a_
      complexed with so4, zn; mutant
      1. region 2:184-644 [137477]
    13. 2im3
      automatically matched to d1ra6a_
      complexed with acy, cas, mn, na, utp; mutant
      1. region a:1-461 [137505]
  2. Hepatitis C virus [TaxId: 11103] [56697] (30)
    1. 1gx5
      complexed with gtp, mn, mse
      1. chain a [70682]
    2. 2d3z
      automatically matched to d1nhvb_
      complexed with fih
      1. region a:1-562 [131234]
    3. 2d3z
      automatically matched to d1nhvb_
      complexed with fih
      1. region b:1-562 [131235]
    4. 1gx6
      complexed with mn, mse, utp
      1. chain a [70683]
    5. 1c2p
      1. chain a [43117]
      2. chain b [43118]
    6. 2d3u
      automatically matched to d1nhvb_
      complexed with cct
      1. region a:1-562 [131232]
    7. 2d3u
      automatically matched to d1nhvb_
      complexed with cct
      1. region b:1-562 [131233]
    8. 1nhu
      complexed with 153
      1. chain a [85723]
      2. chain b [85724]
    9. 2hwi
      automatically matched to d1c2pb_
      complexed with vrx
      1. region a:1-564 [136824]
    10. 2hwi
      automatically matched to d1c2pb_
      complexed with vrx
      1. region b:1-564 [136825]
    11. 2d41
      automatically matched to d1nhvb_
      complexed with snh
      1. region a:1-562 [131236]
    12. 2d41
      automatically matched to d1nhvb_
      complexed with snh
      1. region b:1-562 [131237]
    13. 2o5d
      automatically matched to d1c2pb_
      complexed with vr1
      1. region a:1-564 [138918]
    14. 2o5d
      automatically matched to d1c2pb_
      complexed with vr1
      1. region b:1-564 [138919]
    15. 2gc8
      automatically matched to d1nhvb_
      complexed with 885
      1. region a:1-562 [134970]
    16. 2gc8
      automatically matched to d1nhvb_
      complexed with 885
      1. region b:1-562 [134971]
    17. 1nb4
      1. chain a [85509]
      2. chain b [85510]
    18. 2brk
      automatically matched to d1csja_
      complexed with cmf, mn
      1. region a:1-531 [129001]
    19. 2ijn
      automatically matched to d1c2pb_
      complexed with 221
      1. region a:1-564 [137478]
    20. 2ijn
      automatically matched to d1c2pb_
      complexed with 221
      1. region b:1-564 [137479]
    21. 2i1r
      automatically matched to d1c2pb_
      complexed with vxr
      1. region a:1-564 [136986]
    22. 2i1r
      automatically matched to d1c2pb_
      complexed with vxr
      1. region b:1-564 [136987]
    23. 1os5
      complexed with nh1; mutant
      1. chain a [93475]
    24. 2hwh
      automatically matched to d1c2pb_
      complexed with rna
      1. region a:1-564 [136822]
    25. 2hwh
      automatically matched to d1c2pb_
      complexed with rna
      1. region b:1-564 [136823]
    26. 1nb6
      complexed with mn, utp
      1. chain a [85511]
      2. chain b [85512]
    27. 1csj
      1. chain a [43120]
      2. chain b [43121]
    28. 1nhv
      complexed with 154
      1. chain a [85725]
      2. chain b [85726]
    29. 1quv
      1. chain a [43119]
    30. 1nb7
      complexed with mn
      1. chain a [85513]
      2. chain b [85514]
  3. Rabbit hemorrhagic disease virus [TaxId: 11976] [69882] (2)
    1. 1khv
      complexed with lu
      1. chain a [68627]
      2. chain b [68628]
    2. 1khw
      complexed with mn
      1. chain a [68629]
      2. chain b [68630]
  4. Norwalk virus [TaxId: 11983] [103400] (3)
    1. 1sh0
      1. chain a [98876]
      2. chain b [98877]
    2. 1sh2
      1. chain a [98878]
    3. 1sh3
      complexed with mg
      1. chain a [98879]
      2. chain b [98880]
  5. Bovine viral diarrhea virus [TaxId: 11099] [103401] (3)
    1. 1s48
      1. chain a [98475]
    2. 1s49
      complexed with gtp
      1. chain a [98476]
    3. 1s4f
      1. chain a [98495]
      2. chain b [98496]
      3. chain c [98497]
      4. chain d [98498]
  6. Human rhinovirus 1B, HRV-1B [TaxId: 12129] [111299] (1)
    SQ P12916 1698-2157
    1. 1xr6
      complexed with k
      1. chain a [115865]
  7. Human rhinovirus 16, HRV-16 [TaxId: 31708] [111300] (1)
    SQ Q82122 1694-2153
    1. 1xr7
      1. chain a [115866]
      2. chain b [115867]
  8. Human rhinovirus 14, HRV-14 [TaxId: 12131] [111301] (1)
    SQ P03303 1720-2179
    1. 1xr5
      complexed with sm
      1. chain a [115864]
  9. Foot-and-mouth disease virus [TaxId: 12110] [111302] (10)
    SQ Q9QCE4 1858-2327
    1. 1u09
      1. chain a [107545]
    2. 2e9t
      automatically matched to d1u09a_
      complexed with 5fu, mg, ppv
      1. region a:1-474 [146733]
    3. 2e9t
      automatically matched to d1u09a_
      complexed with 5fu, mg, ppv
      1. region d:1-474 [146734]
    4. 2e9z
      automatically matched to d1u09a_
      complexed with mg, ppv, utp
      1. region a:1-476 [146753]
    5. 1wne
      complexed with mg
      1. chain a [109434]
    6. 2ec0
      automatically matched to d1u09a_
      complexed with mg, ppv
      1. region a:1-470 [146776]
    7. 2ec0
      automatically matched to d1u09a_
      complexed with mg, ppv
      1. region d:1-470 [146777]
    8. 2f8e
      automatically matched to d1u09a_
      complexed with mg, mn, u5p
      1. region x:1-474 [133121]
    9. 2e9r
      automatically matched to d1u09a_
      complexed with mg, rtp
      1. region x:1-476 [146732]
    10. 2d7s
      automatically matched to d1u09a_
      1. region a:1-474 [131326]
  10. Avian infectious bursal disease virus [TaxId: 10995] [160955] (1)
    SQ Q9Q6Q5 31-804
    1. 2pgg
      1. region a:31-804 [149462]
2. Reovirus polymerase lambda3 [82841]
  contains additional N-terminal domain (res. 1-380) and C-terminal "bracelet" domain (res. 891-1267)
  1. Reovirus [TaxId: 10891] [82842] (5)
    1. 1muk
      1. chain a [79492]
    2. 1n35
      elongation complex with four phosphodiester bonds formed
      complexed with ch1, mn
      1. chain a [79935]
    3. 1mwh
      complexed with gtg, mn
      1. chain a [79573]
    4. 1n38
      elongation complex with one phosphodiester bond formed
      complexed with ch1, mn, u3h
      1. chain a [79958]
    5. 1n1h
      initiation complex
      complexed with ch1, g7m, gdp, gh3, mn
      1. chain a [79804]
dsRNA phage RNA-dependent RNA-polymerase [64480] (1)
1. dsRNA phage RNA-dependent RNA-polymerase [64481]
  1. Bacteriophage PHI-6 [TaxId: 10879] [64482] (11)
    1. 1hhs
      complexed with mn
      1. chain a [61045]
      2. chain b [61046]
      3. chain c [61047]
    2. 1uvj
      complexed with mn
      1. chain a [100045]
      2. chain b [100046]
      3. chain c [100047]
    3. 1uvm
      complexed with mn
      1. chain a [100054]
      2. chain b [100055]
      3. chain c [100056]
    4. 1uvi
      complexed with mn
      1. chain a [100042]
      2. chain b [100043]
      3. chain c [100044]
    5. 1uvl
      complexed with mn
      1. chain a [100051]
      2. chain c [100052]
      3. chain e [100053]
    6. 1uvk
      complexed with gtp, mg, mn, pop
      1. chain a [100048]
      2. chain c [100049]
      3. chain e [100050]
    7. 1hi0
      complexed with gtp, mg, mn
      1. chain p [61051]
      2. chain q [61052]
      3. chain r [61053]
    8. 1hht
      complexed with mn
      1. chain p [61048]
      2. chain q [61049]
      3. chain r [61050]
    9. 1hi8
      complexed with mg
      1. chain a [61061]
      2. chain b [61062]
    10. 1hi1
      complexed with atp
      1. chain a [61054]
      2. chain b [61055]
      3. chain c [61056]
    11. 1uvn
      complexed with ca, gtp, mn
      1. chain a [100057]
      2. chain c [100058]
      3. chain e [100059]