Structural Classification of Proteins
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Protein: Immunoglobulin light chain kappa variable domain, VL-kappa from Mouse (Mus musculus), cluster 3.2 [TaxId: 10090]

SQ P04940 # KV6F_MOUSE IG KAPPA CHAIN V-VI REGION NQ2-17.4.1

Lineage:

  1. Root: scop
  2. Class: All beta proteins [48724]
  3. Fold: Immunoglobulin-like beta-sandwich [48725]
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. Superfamily: Immunoglobulin [48726]
    link to SUPERFAMILY database - Superfamily
  5. Family: V set domains (antibody variable domain-like) [48727]
  6. Protein: Immunoglobulin light chain kappa variable domain, VL-kappa [88519]
    VL-kappa domains of human and mouse antibodies are clustered by the sequence similarity within the germline encoded segment and then by the size of the complementarity determining regions CDR1 and CDR2, so the clusters may correspond to putative germline families in the species genomes; VL-kappa domains with artificial or grafted exogenous CDRs are listed as engineered species
  7. Species: Mouse (Mus musculus), cluster 3.2 [TaxId: 10090] [88528]
    SQ P04940 # KV6F_MOUSE IG KAPPA CHAIN V-VI REGION NQ2-17.4.1

PDB Entry Domains:

  1. 1yqv picpicxrefxrefxref
    automatically matched to d1eo8l1
    1. region l:2-107 [123900] picpiclink
  2. 1ay1 picpicxrefxrefxref
    part of Fab TP7 against Taq DNA polymerase
    1. region l:1-107 [20242] picpiclink
  3. 1qok picpicxref
    part of anti-carcinoembryonic scFv MFE-23
    1. region a:162-267 [20493] picpiclink
  4. 2bmk picpicxrefxrefxrefxrefxrefxref
    automatically matched to d1dqdl1
    complexed with iod, pdd
    1. region a:1-107 [128798] picpiclink
  5. 2bmk picpicxrefxrefxrefxrefxrefxref
    automatically matched to d1dqdl1
    complexed with iod, pdd
    1. region l:1-107 [128800] picpiclink
  6. 2z92 picpicxrefxref
    automatically matched to d1dqdl1
    complexed with cit, ene
    1. region b:1-107 [154226] picpiclink
  7. 1dqd picpicxrefxrefxref
    part of Fab HGR-2 F6, a competitive antagonist of the glucagon receptor
    1. region l:1-106 [20440] picpiclink
  8. 2b2x picpicxrefxrefxrefxref
    automatically matched to d1dqdl1
    complexed with mg; mutant
    1. region l:2-106 [127750] picpiclink
  9. 2b2x picpicxrefxrefxrefxref
    automatically matched to d1dqdl1
    complexed with mg; mutant
    1. region m:2-106 [127752] picpiclink
  10. 2j4w picpicxrefxrefxrefxref
    automatically matched to d1dqdl1
    mutant
    1. region l:3-107 [138007] picpiclink
  11. 1bgx picpicxrefxrefxrefxrefxrefxrefxref
    part of Fab TP7 against Taq DNA polymerase
    1. region l:1-107 [20244] picpiclink
  12. 1wcb picpicxrefxrefxrefxrefxrefxref
    automatically matched to d1dqdl1
    complexed with iod, pe1
    1. region a:1-107 [120882] picpiclink
  13. 1wcb picpicxrefxrefxrefxrefxrefxref
    automatically matched to d1dqdl1
    complexed with iod, pe1
    1. region l:1-107 [120884] picpiclink
  14. 1for picpicxrefxrefxref
    part of Fab 17-Ia
    1. region l:1-107 [19988] picpiclink
  15. 2z91 picpicxrefxrefxrefxref
    automatically matched to d1dqdl1
    1. region b:1-107 [154220] picpiclink
  16. 2z91 picpicxrefxrefxrefxref
    automatically matched to d1dqdl1
    1. region d:1-107 [154223] picpiclink
  17. 1mim picpicxrefxrefxref
    part of CD25-binding humanized Fab CHI621
    1. region l:1-105 [20128] picpiclink
  18. 1bql picpicxrefxrefxrefxref
    part of Fab HyHEL-5
    part of Fab HyHEL-5
    1. region l:1-106 [19970] picpiclink
  19. 1psk picpicxrefxrefxref
    part of antibody against the melanoma associated gd2 ganglioside
    1. region l:1-106 [20138] picpiclink
  20. 1eo8 picpicxrefxrefxrefxrefxref
    part of Influenza virus hemagglutinin-neutralizing Fab BH151
    complexed with man, nag
    1. region l:1-106b [20294] picpiclink
  21. 1ots picpicxrefxrefxrefxref
    part of anti-CLC chloride channel Fab
    complexed with cl
    1. region d:1-106 [87419] picpiclink
    2. region f:1-106 [87423] picpiclink
  22. 2osl picpicxrefxref
    automatically matched to d1dqdl1
    1. region b:2-106 [139296] picpiclink
  23. 2osl picpicxrefxref
    automatically matched to d1dqdl1
    1. region l:2-106 [139298] picpiclink
  24. 2z93 picpicxrefxrefxref
    automatically matched to d1dqdl1
    complexed with end
    1. region d:1-107 [154230] picpiclink
  25. 1baf picpicxrefxrefxref
    part of Fab ANO2
    complexed with npp
    1. region l:1-108 [19778] picpiclink
  26. 2iff picpicxrefxrefxrefxref
    part of Fab HyHEL-5
    mutant
    1. region l:1-106 [19972] picpiclink
  27. 1wc7 picpicxrefxrefxrefxrefxrefxref
    automatically matched to d1dqdl1
    complexed with iod, pp3
    1. region a:1-107 [120878] picpiclink
  28. 1wc7 picpicxrefxrefxrefxrefxrefxref
    automatically matched to d1dqdl1
    complexed with iod, pp3
    1. region l:1-107 [120880] picpiclink
  29. 1v7m picpicxrefxrefxrefxref
    part of anti-trombopoetin Fab tn1
    1. region l:1-107 [100454] picpiclink
    2. region m:1-107 [100456] picpiclink
  30. 2fed picpicxrefxrefxrefxref
    automatically matched to d1dqdl1
    mutant
    1. region d:1-105 [133333] picpiclink
  31. 2fed picpicxrefxrefxrefxref
    automatically matched to d1dqdl1
    mutant
    1. region f:1-105 [133335] picpiclink
  32. 2j5l picpicxrefxrefxrefxref
    automatically matched to d1dqdl1
    mutant
    1. region b:3-107 [138045] picpiclink
  33. 2htk picpicxrefxrefxrefxref
    automatically matched to d1dqdl1
    complexed with br; mutant
    1. region d:1-105 [136745] picpiclink
  34. 2htk picpicxrefxrefxrefxref
    automatically matched to d1dqdl1
    complexed with br; mutant
    1. region f:1-105 [136747] picpiclink
  35. 2ht4 picpicxrefxrefxrefxref
    automatically matched to d1dqdl1
    complexed with br; mutant
    1. region d:1-105 [136738] picpiclink
  36. 2ht4 picpicxrefxrefxrefxref
    automatically matched to d1dqdl1
    complexed with br; mutant
    1. region f:1-105 [136740] picpiclink
  37. 2h2p picpicxrefxrefxrefxref
    automatically matched to d1dqdl1
    complexed with sek
    1. region d:1-105 [136018] picpiclink
  38. 2h2p picpicxrefxrefxrefxref
    automatically matched to d1dqdl1
    complexed with sek
    1. region f:1-105 [136020] picpiclink
  39. 2exw picpicxrefxrefxrefxref
    automatically matched to d1dqdl1
    1. region d:1-105 [132568] picpiclink
  40. 2exw picpicxrefxrefxrefxref
    automatically matched to d1dqdl1
    1. region f:1-105 [132570] picpiclink
  41. 2htl picpicxrefxrefxrefxref
    automatically matched to d1dqdl1
    complexed with br; mutant
    1. region d:1-105 [136749] picpiclink
  42. 2htl picpicxrefxrefxrefxref
    automatically matched to d1dqdl1
    complexed with br; mutant
    1. region f:1-105 [136751] picpiclink
  43. 2hlf picpicxrefxrefxrefxref
    automatically matched to d1dqdl1
    complexed with br; mutant
    1. region d:1-105 [136566] picpiclink
  44. 2hlf picpicxrefxrefxrefxref
    automatically matched to d1dqdl1
    complexed with br; mutant
    1. region f:1-105 [136568] picpiclink
  45. 2fee picpicxrefxrefxrefxref
    automatically matched to d1dqdl1
    1. region l:1-105 [133339] picpiclink
  46. 2fee picpicxrefxrefxrefxref
    automatically matched to d1dqdl1
    1. region o:1-105 [133341] picpiclink
  47. 2h2s picpicxrefxrefxrefxref
    automatically matched to d1dqdl1
    complexed with sek; mutant
    1. region d:1-105 [136024] picpiclink
  48. 2h2s picpicxrefxrefxrefxref
    automatically matched to d1dqdl1
    complexed with sek; mutant
    1. region f:1-105 [136026] picpiclink
  49. 1ott picpicxrefxrefxrefxref
    part of anti-CLC chloride channel Fab
    complexed with cl; mutant
    1. region d:1-106 [87429] picpiclink
    2. region f:1-106 [87433] picpiclink
  50. 2ht3 picpicxrefxrefxrefxref
    automatically matched to d1dqdl1
    complexed with br; mutant
    1. region d:1-105 [136734] picpiclink
  51. 2ht3 picpicxrefxrefxrefxref
    automatically matched to d1dqdl1
    complexed with br; mutant
    1. region f:1-105 [136736] picpiclink
  52. 2ht2 picpicxrefxrefxrefxref
    automatically matched to d1dqdl1
    complexed with br; mutant
    1. region d:1-105 [136730] picpiclink
  53. 2ht2 picpicxrefxrefxrefxref
    automatically matched to d1dqdl1
    complexed with br; mutant
    1. region f:1-105 [136732] picpiclink
  54. 2ez0 picpicxrefxrefxrefxref
    automatically matched to d1dqdl1
    complexed with br; mutant
    1. region d:1-105 [132606] picpiclink
  55. 2ez0 picpicxrefxrefxrefxref
    automatically matched to d1dqdl1
    complexed with br; mutant
    1. region f:1-105 [132608] picpiclink
  56. 2fec picpicxrefxrefxrefxref
    automatically matched to d1dqdl1
    mutant
    1. region l:1-105 [133329] picpiclink
  57. 2fec picpicxrefxrefxrefxref
    automatically matched to d1dqdl1
    mutant
    1. region o:1-105 [133331] picpiclink
  58. 1v7n picpicxrefxrefxrefxref
    part of anti-trombopoetin Fab tn1
    mutant
    1. region l:1-107 [100468] picpiclink
    2. region m:1-107 [100470] picpiclink
    3. region n:1-107 [100472] picpiclink
    4. region o:1-107 [100474] picpiclink
  59. 1z3g picpicxrefxrefxrefxref
    1. region l:1-106 [144733] picpiclink
  60. 1z3g picpicxrefxrefxrefxref
    automatically matched to 1Z3G L:1-106
    1. region m:1-106 [144735] picpiclink
  61. 1otu picpicxrefxrefxrefxref
    part of anti-CLC chloride channel Fab
    complexed with cl; mutant
    1. region d:1-106 [87439] picpiclink
    2. region f:1-106 [87443] picpiclink
  62. 2exy picpicxrefxrefxrefxref
    automatically matched to d1dqdl1
    mutant
    1. region d:1-105 [132574] picpiclink
  63. 2exy picpicxrefxrefxrefxref
    automatically matched to d1dqdl1
    mutant
    1. region f:1-105 [132576] picpiclink
  64. 1rvf picpicxrefxref
    part of Fv 17-Ia
    1. chain l [19990] picpiclink
  65. 1sy6 picpicxrefxrefxrefxrefxref
    MQ P04940 P01837 # natural chimera
    1. region l:1-106 [106115] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk