Structural Classification of Proteins
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Protein: 5' to 3' exonuclease domain of DNA polymerase Taq from Thermus aquaticus [TaxId: 271]

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: PIN domain-like [88722]
    3 layers, a/b/a; core: parallel beta-sheet of 5 strands, order 32145
  4. Superfamily: PIN domain-like [88723]
    link to SUPERFAMILY database - Superfamily
  5. Family: 5' to 3' exonuclease catalytic domain [53045]
    contains an alpha-helical arch and additional strand 6 antiparallel to the rest; strand order 321456; similarity to the resolvase-like fold
  6. Protein: 5' to 3' exonuclease domain of DNA polymerase Taq [53048]
  7. Species: Thermus aquaticus [TaxId: 271] [53049]

PDB Entry Domains:

  1. 1cmw picpicxrefxrefxref
    1. region a:10-173 [33354] picpiclink
  2. 1bgx picpicxrefxrefxrefxrefxrefxrefxref
    1. region t:1-173 [33353] picpiclink
  3. 1taq picpicxrefxrefxref
    complexed with bgl, zn; mutant
    1. region a:10-173 [33352] picpiclink
  4. 1tau picpicxrefxrefxref
    protein/DNA complex; complexed with bgl, zn
    1. region a:10-173 [33355] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk