Structural Classification of Proteins
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Protein: Immunoglobulin heavy chain variable domain, VH from Mouse (Mus musculus), cluster 1 [TaxId: 10090]

SQ P01796 # ! HV27_MOUSE Ig heavy chain V-III region A4

Lineage:

  1. Root: scop
  2. Class: All beta proteins [48724]
  3. Fold: Immunoglobulin-like beta-sandwich [48725]
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. Superfamily: Immunoglobulin [48726]
    link to SUPERFAMILY database - Superfamily
  5. Family: V set domains (antibody variable domain-like) [48727]
  6. Protein: Immunoglobulin heavy chain variable domain, VH [88543]
    VH domains of human and mouse antibodies are clustered by the sequence similarity within the germline encoded segment and then by the size of the complementarity determining regions CDR1 and CDR2, so the clusters may correspond to putative germline families in the species genomes; VH domains with artificial or grafted exogenous CDRs are listed as engineered species
  7. Species: Mouse (Mus musculus), cluster 1 [TaxId: 10090] [88548]
    SQ P01796 # ! HV27_MOUSE Ig heavy chain V-III region A4

PDB Entry Domains:

  1. 1dlf picpicxref
    part of anti-dansyl Fv
    complexed with so4
    1. chain h [20383] picpiclink
  2. 1q9r picpicxrefxrefxref
    part of Fab s25-2
    complexed with kda, kdo, mg, zn
    1. region b:1-111 [96307] picpiclink
  3. 1q9q picpicxrefxrefxref
    part of Fab s25-2
    complexed with kda, kdo, mg, zn
    1. region b:1-111 [96303] picpiclink
  4. 2dlf picpicxref
    part of anti-dansyl Fv
    1. chain h [20385] picpiclink
  5. 1q9v picpicxrefxrefxref
    part of Fab s25-2
    complexed with kdo, mg, zn
    1. region b:1-111 [96318] picpiclink
  6. 1q72 picpicxrefxrefxref
    part of anti-cocaine Fab M82G2
    complexed with coc
    1. region h:1-113 [96014] picpiclink
  7. 1qyg picpicxrefxrefxref
    part of anti-cocaine Fab M82G2
    complexed with bcg
    1. region h:1-113 [96589] picpiclink
  8. 1q9t picpicxrefxrefxref
    part of Fab s25-2
    complexed with kda, kdo, mg, zn
    1. region b:1-111 [96312] picpiclink
  9. 1pz5 picpicxrefxrefxref
    part of Fab Sya/J6
    1. region b:1-113 [95403] picpiclink
  10. 1q9w picpicxrefxrefxref
    part of Fab s45-18
    complexed with gp1, gp4, kdo, mg
    1. region b:1-111 [96322] picpiclink
    2. region d:1-111 [96326] picpiclink
  11. 1q9o picpicxrefxrefxref
    part of Fab s45-18
    complexed with mg
    1. region b:1-111 [96294] picpiclink
    2. region d:1-111 [96298] picpiclink
  12. 1riu picpicxrefxrefxref
    part of anti-cocaine Fab M82G2
    complexed with rbe
    1. region h:1-113 [97518] picpiclink
  13. 1wz1 picpicxref
    automatically matched to d1dlfh_
    complexed with dns
    1. region h:1-120 [121476] picpiclink
  14. 1kel picpicxrefxrefxref
    part of Fab 28B4
    complexed with aah
    1. region h:1-115 [20113] picpiclink
  15. 1rfd picpicxrefxrefxref
    part of anti-cocaine Fab M82G2
    1. region h:1-113 [97372] picpiclink
  16. 1riv picpicxrefxrefxref
    part of anti-cocaine Fab M82G2
    complexed with obe
    1. region h:1-113 [97522] picpiclink
  17. 1sbs picpicxrefxrefxref
    part of anti-HCG Fab 3A2
    complexed with so4
    1. region h:1-123 [20367] picpiclink
  18. 1sm3 picpicxrefxrefxref
    part of tumor-specific Fab SM3 against epithelial mucin Muc1
    complexed with cd, cl
    1. region h:1-113 [20369] picpiclink
  19. 1q9k picpicxrefxrefxref
    part of Fab s25-2
    complexed with mg
    1. region b:1-111 [96278] picpiclink
  20. 1flr picpicxrefxrefxref
    part of Fab 4-4-20
    complexed with flu
    1. region h:1-118 [19905] picpiclink
  21. 1fl5 picpicxrefxrefxref
    part of humanized catalytic Fab 28b4 with a sulfide oxidase activity
    complexed with so4; mutant
    1. region h:1-113 [65019] picpiclink
    2. region b:1-113 [65017] picpiclink
  22. 1kem picpicxrefxrefxref
    part of Fab 28B4
    1. region h:1-115 [20115] picpiclink
  23. 2ck0 picpicxrefxrefxref
    part of anti-anti-idiotypic Fab against human angiotensin II, complex with a synthetic cyclic peptide
    1. region h:1-106 [100853] picpiclink
  24. 1clo picpicxrefxrefxref
    part of Fab A5B7
    1. region h:1-113 [20123] picpiclink
  25. 1m7d picpicxrefxrefxref
    part of Fab specific for Y lipopolysaccharide
    complexed with 1na, raa, rae
    1. region b:1-113 [84863] picpiclink
  26. 2bmk picpicxrefxrefxrefxrefxrefxref
    automatically matched to 1WC7 B:1-113
    complexed with iod, pdd
    1. region b:1-113 [144992] picpiclink
  27. 2bmk picpicxrefxrefxrefxrefxrefxref
    automatically matched to 1WC7 B:1-113
    complexed with iod, pdd
    1. region h:1-113 [144994] picpiclink
  28. 1axt picpicxrefxrefxref
    part of catalytic Fab 33F12 with an aldolase activity
    1. region h:1-113 [20305] picpiclink
  29. 1t66 picpicxrefxrefxref
    complexed with flu
    1. region d:1-118 [106547] picpiclink
    2. region h:1-118 [106549] picpiclink
  30. 1q9l picpicxrefxrefxref
    part of Fab s25-2
    complexed with mg, zn
    1. region b:1-111 [96282] picpiclink
    2. region d:1-111 [96286] picpiclink
  31. 1ck0 picpicxrefxrefxref
    part of anti-anti-idiotypic Fab against human angiotensin II, unliganded form
    1. region h:1-106 [90422] picpiclink
  32. 1m7i picpicxrefxrefxref
    part of Fab specific for Y lipopolysaccharide
    complexed with nag, raa, rao
    1. region b:1-113 [84867] picpiclink
  33. 1wcb picpicxrefxrefxrefxrefxrefxref
    automatically matched to 1WC7 B:1-113
    complexed with iod, pe1
    1. region b:1-113 [144554] picpiclink
  34. 1wcb picpicxrefxrefxrefxrefxrefxref
    automatically matched to 1WC7 B:1-113
    complexed with iod, pe1
    1. region h:1-113 [144556] picpiclink
  35. 1fl6 picpicxrefxrefxref
    part of humanized catalytic Fab 28b4 with a sulfide oxidase activity
    complexed with aah; mutant
    1. region h:1-113 [65027] picpiclink
    2. region b:1-113 [65025] picpiclink
  36. 1nbv picpicxrefxrefxref
    part of Fab BV04-01
    1. region h:1-122 [19899] picpiclink
  37. 1mam picpicxrefxrefxref
    part of Fab Yst9.1
    1. region h:1-119 [19887] picpiclink
  38. 3ck0 picpicxrefxrefxref
    part of anti-anti-idiotypic Fab against human angiotensin II, complex with angiotensin II
    1. region h:1-106 [100865] picpiclink
  39. 1v7m picpicxrefxrefxrefxref
    part of anti-trombopoetin Fab tn1
    1. region h:1-116 [100450] picpiclink
    2. region i:1-116 [100452] picpiclink
  40. 1m71 picpicxrefxrefxref
    part of Fab specific for Y lipopolysaccharide
    1. region b:1-113 [84853] picpiclink
  41. 1wc7 picpicxrefxrefxrefxrefxrefxref
    complexed with iod, pp3
    1. region b:1-113 [144550] picpiclink
  42. 1wc7 picpicxrefxrefxrefxrefxrefxref
    automatically matched to 1WC7 B:1-113
    complexed with iod, pp3
    1. region h:1-113 [144552] picpiclink
  43. 1cbv picpicxrefxrefxref
    part of Fab BV04-01
    1. region h:1-122 [19901] picpiclink
  44. 1iai picpicxrefxrefxrefxrefxrefxrefxref
    part of Fab 409.5.3
    1. region i:1-121 [20075] picpiclink
  45. 2uud picpic
    complexed with phx
    1. region h:1-113 [152181] picpiclink
  46. 2uud picpic
    complexed with phx
    1. region j:1-113 [152182] picpiclink
  47. 1mcp picpicxrefxrefxref
    part of Fab MCPC603
    complexed with so4
    1. region h:1-121 [19859] picpiclink
  48. 2mcp picpicxrefxrefxref
    part of Fab MCPC603
    complexed with pc
    1. region h:1-121 [19861] picpiclink
  49. 4fab picpicxrefxrefxref
    part of Fab 4-4-20
    complexed with fds, mpd
    1. region h:1-118 [19907] picpiclink
  50. 1aif picpicxrefxrefxref
    part of Fab 409.5.3
    1. region b:1-121 [20077] picpiclink
    2. region h:1-121 [20079] picpiclink
  51. 1v7n picpicxrefxrefxrefxref
    part of anti-trombopoetin Fab tn1
    mutant
    1. region h:1-116 [100460] picpiclink
    2. region i:1-116 [100462] picpiclink
    3. region j:1-116 [100464] picpiclink
    4. region k:1-116 [100466] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk