Protein: Rhinovirus coat proteins from Human rhinovirus B 14 (HRV-14) [TaxId: 12131]

Lineage:

1. Root: scop
2. Class: All beta proteins [48724]
3. Fold: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632]
   sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
   characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies
4. Superfamily: Positive stranded ssRNA viruses [88633]
   uperfamily
5. Family: Picornaviridae-like VP (VP1, VP2, VP3 and VP4) [88634]
   the order of the chains N-VP0-VP3-VP1-C is as in the polyprotein; VP0 is cleaved later upon capsid assembly to VP4 and VP2
   there is a different order in the shuffled genome of insect picorna-like proteins (Cricket paralysis virus)
6. Protein: Rhinovirus coat proteins [49670]
7. Species: Human rhinovirus B 14 (HRV-14) [TaxId: 12131] [49671]

PDB Entry Domains:

1. 1ncq
   complexed with w11
   1. chain d,b [91802]
   2. chain c [91804]
   3. chain a [91803]
2. 1k5m
   grafted HIV-1 v3 loop in chain B
   complexed with sph
   1. chain d,b [83093]
   2. chain c [72080]
   3. chain a [72078]
3. 4rhv
   1. chain 4,2 [83147]
   2. chain 3 [23440]
   3. chain 1 [23438]
4. 1na1
   complexed with w11
   1. chain d,b [91742]
   2. chain c [91744]
   3. chain a [91743]
5. 1rud
   complexed with w84; mutant
   1. chain 4,2 [83115]
   2. chain 3 [23446]
   3. chain 1 [23444]
6. 1r09
   complexed with dms, jen
   1. chain 4,2 [83110]
   2. chain 3 [23443]
   3. chain 1 [23441]
7. 1vrh
   complexed with sd8; mutant
   1. chain 4,2 [83130]
   2. chain 3 [23467]
   3. chain 1 [23465]
8. 2rr1
   complexed with w8r
   1. chain 4,2 [83143]
   2. chain 3 [23455]
   3. chain 1 [23453]
9. 2r07
   complexed with w33
   1. chain 4,2 [83140]
   2. chain 3 [23449]
   3. chain 1 [23447]
10. 2rs1
    complexed with w84
    1. chain 4,2 [83144]
    2. chain 3 [23458]
    3. chain 1 [23456]
11. 1rui
    complexed with w84; mutant
    1. chain 4,2 [83120]
    2. chain 3 [23464]
    3. chain 1 [23462]
12. 1ruf
    mutant
    1. chain 4,2 [83117]
    2. chain 3 [23473]
    3. chain 1 [23471]
13. 1rue
    complexed with w35; mutant
    1. chain 4,2 [83116]
    2. chain 3 [23470]
    3. chain 1 [23468]
14. 2rm2
    complexed with w43
    1. chain 4,2 [83141]
    2. chain 3 [23452]
    3. chain 1 [23450]
15. 1ruh
    complexed with w84; mutant
    1. chain 4,2 [83119]
    2. chain 3 [23461]
    3. chain 1 [23459]
16. 1hrv
    complexed with sdz
    1. chain 4,2 [83063]
    2. chain 3 [23479]
    3. chain 1 [23477]
17. 1ruj
    mutant
    1. chain 4,2 [83121]
    2. chain 3 [23500]
    3. chain 1 [23498]
18. 2rmu
    mutant
    1. chain 4,2 [83142]
    2. chain 3 [23503]
    3. chain 1 [23501]
19. 1rmu
    complexed with trs; mutant
    1. chain 4,2 [83113]
    2. chain 3 [23506]
    3. chain 1 [23504]
20. 1hri
    complexed with s57
    1. chain 4,2 [83062]
    2. chain 3 [23476]
    3. chain 1 [23474]
21. 2r06
    complexed with w35
    1. chain 4,2 [83139]
    2. chain 3 [23494]
    3. chain 1 [23492]
22. 1rug
    complexed with w35; mutant
    1. chain 4,2 [83118]
    2. chain 3 [23497]
    3. chain 1 [23495]
23. 2hwb
    complexed with w91; mutant
    1. chain 4,2 [83131]
    2. chain 3 [23509]
    3. chain 1 [23507]
24. 2r04
    complexed with w71
    1. chain 4,2 [83138]
    2. chain 3 [23488]
    3. chain 1 [23486]
25. 2rs5
    complexed with w56
    1. chain 4,2 [83146]
    2. chain 3 [23491]
    3. chain 1 [23489]
26. 2hwc
    complexed with w54; mutant
    1. chain 4,2 [83132]
    2. chain 3 [23512]
    3. chain 1 [23510]
27. 2rs3
    complexed with w59
    1. chain 4,2 [83145]
    2. chain 3 [23482]
    3. chain 1 [23480]
28. 1r08
    complexed with w42
    1. chain 4,2 [83109]
    2. chain 3 [23485]
    3. chain 1 [23483]
29. 1ruc
    complexed with w35; mutant
    1. chain 4,2 [83114]
    2. chain 3 [23515]
    3. chain 1 [23513]
30. 1rvf
    1. chain 4,2 [83122]
    2. chain 3 [23518]
    3. chain 1 [23516]

Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009 Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk