Family: Picornaviridae-like VP (VP1, VP2, VP3 and VP4)

the order of the chains N-VP0-VP3-VP1-C is as in the polyprotein; VP0 is cleaved later upon capsid assembly to VP4 and VP2
there is a different order in the shuffled genome of insect picorna-like proteins (Cricket paralysis virus)

Lineage:

1. Root: scop
2. Class: All beta proteins [48724]
3. Fold: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632]
   sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
   characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies
4. Superfamily: Positive stranded ssRNA viruses [88633]
   uperfamily
5. Family: Picornaviridae-like VP (VP1, VP2, VP3 and VP4) [88634]
   the order of the chains N-VP0-VP3-VP1-C is as in the polyprotein; VP0 is cleaved later upon capsid assembly to VP4 and VP2
   there is a different order in the shuffled genome of insect picorna-like proteins (Cricket paralysis virus)

Protein Domains:

1. Human enterovirus B coat proteins [88635]
   1. Human coxsackievirus B3 [TaxId: 12072] [49681] (1)
   2. Human coxsackievirus A9 [TaxId: 12067] [49683] (1)
   3. Human echovirus 1 [TaxId: 46633] [49685] (1)
   4. Human echovirus 11 [TaxId: 12078] [74890] (4)
2. Bovine enterovirus coat proteins [49676]
   1. Bovine enterovirus, VG-5-27 [TaxId: 12064] [49677] (1)
3. Poliovirus coat proteins [49666]
   1. Poliovirus type 1, strain Mahoney [TaxId: 12080] [49667] (12)
   2. Poliovirus type 2, strain Lansing [TaxId: 12083] [49668] (1)
   3. Poliovirus type 3, strain Sabin [TaxId: 12086] [49669] (7)
4. Rhinovirus coat proteins [49670]
   1. Human rhinovirus B 14 (HRV-14) [TaxId: 12131] [49671] (30)
   2. Human rhinovirus 16, (HRV-16) [TaxId: 31708] [49672] (9)
   3. Human rhinovirus A 1A (HRV-1A) [TaxId: 12134] [49673] (4)
   4. Human rhinovirus A 2 (HRV-2) [TaxId: 12130] [49674] (2)
   5. Human rhinovirus 3, (HRV-3) [TaxId: 44130] [49675] (1)
5. Aphthovirus (Foot-and-mouth disease virus) coat proteins [49659]
   1. FMDV (Foot-and-mouth disease virus), strain bfs, 1860 [TaxId: 12110] [49660] (4)
6. Theilovirus capsid proteins [49686]
   1. Theiler's murine encephalomyelitis virus, strain da [TaxId: 12124] [49687] (2)
7. Mengo encephalomyocarditis virus coat proteins [49678]
   1. Mengovirus [TaxId: 12107] [49679] (2)
8. Swine vesicular disease virus coat proteins [89225]
   1. Swine vesicular disease virus [TaxId: 12075] [89226] (2)
9. Insect picorna-like virus coat proteins [49654]
   different genetic order of VP segments due to extensive genome shuffling
   1. Cricket paralysis virus [TaxId: 12136] [49655] (1)

Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009 Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk