Structural Classification of Proteins
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Protein: Poliovirus coat proteins from Poliovirus type 1, strain Mahoney [TaxId: 12080]

Lineage:

  1. Root: scop
  2. Class: All beta proteins [48724]
  3. Fold: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632]
    sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
    characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies
  4. Superfamily: Positive stranded ssRNA viruses [88633]
    link to SUPERFAMILY database - Superfamily
  5. Family: Picornaviridae-like VP (VP1, VP2, VP3 and VP4) [88634]
    the order of the chains N-VP0-VP3-VP1-C is as in the polyprotein; VP0 is cleaved later upon capsid assembly to VP4 and VP2
    there is a different order in the shuffled genome of insect picorna-like proteins (Cricket paralysis virus)
  6. Protein: Poliovirus coat proteins [49666]
  7. Species: Poliovirus type 1, strain Mahoney [TaxId: 12080] [49667]

PDB Entry Domains:

  1. 1hxs picpic
    complexed with myr, plm
    1. chain 4,2 [83073] picpiclink
    2. chain 3 [65954] picpiclink
    3. chain 1 [65952] picpiclink
  2. 1ar7 picpic
    complexed with myr, sph; mutant
    1. chain 4,2 [83032] picpiclink
    2. chain 3 [23389] picpiclink
    3. chain 1 [23387] picpiclink
  3. 1po1 picpic
    complexed with j80, myr
    1. chain 4,2 [83102] picpiclink
    2. chain 3 [23398] picpiclink
    3. chain 1 [23396] picpiclink
  4. 1al2 picpic
    complexed with myr, sph; mutant
    1. chain 4,2 [83030] picpiclink
    2. chain 3 [23392] picpiclink
    3. chain 1 [23390] picpiclink
  5. 1ar9 picpic
    complexed with myr, sph; mutant
    1. chain 4,2 [83034] picpiclink
    2. chain 3 [23395] picpiclink
    3. chain 1 [23393] picpiclink
  6. 1po2 picpic
    complexed with j77, myr
    1. chain 4,2 [83103] picpiclink
    2. chain 3 [23401] picpiclink
    3. chain 1 [23399] picpiclink
  7. 1asj picpic
    complexed with myr, sph
    1. chain 4,2 [83035] picpiclink
    2. chain 3 [23404] picpiclink
    3. chain 1 [23402] picpiclink
  8. 1ar6 picpic
    complexed with myr, sph; mutant
    1. chain 4,2 [83031] picpiclink
    2. chain 3 [23407] picpiclink
    3. chain 1 [23405] picpiclink
  9. 2plv picpic
    complexed with myr, sph
    1. chain 4,2 [83137] picpiclink
    2. chain 3 [23386] picpiclink
    3. chain 1 [23384] picpiclink
  10. 1ar8 picpic
    complexed with myr, sph; mutant
    1. chain 4,2 [83033] picpiclink
    2. chain 3 [23410] picpiclink
    3. chain 1 [23408] picpiclink
  11. 1pov picpic
    contains unprocessed VP0
    complexed with myr, sph
    1. chain 0 [23411] picpiclink
    2. chain 3 [23413] picpiclink
    3. chain 1 [23412] picpiclink
  12. 1xyr picpic
    automatically matched to d1pov1_
    1. region 1:71-302 [122460] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk