Structural Classification of Proteins
home mail help root up expand collapse

Protein: Aphthovirus (Foot-and-mouth disease virus) coat proteins from FMDV (Foot-and-mouth disease virus), strain bfs, 1860 [TaxId: 12110]

Lineage:

  1. Root: scop
  2. Class: All beta proteins [48724]
  3. Fold: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632]
    sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
    characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies
  4. Superfamily: Positive stranded ssRNA viruses [88633]
    link to SUPERFAMILY database - Superfamily
  5. Family: Picornaviridae-like VP (VP1, VP2, VP3 and VP4) [88634]
    the order of the chains N-VP0-VP3-VP1-C is as in the polyprotein; VP0 is cleaved later upon capsid assembly to VP4 and VP2
    there is a different order in the shuffled genome of insect picorna-like proteins (Cricket paralysis virus)
  6. Protein: Aphthovirus (Foot-and-mouth disease virus) coat proteins [49659]
  7. Species: FMDV (Foot-and-mouth disease virus), strain bfs, 1860 [TaxId: 12110] [49660]

PDB Entry Domains:

  1. 1qqp picpic
    complexed with idu, sgn
    1. chain 4,2 [83108] picpiclink
    2. chain 3 [23365] picpiclink
    3. chain 1 [23363] picpiclink
  2. 1bbt picpic
    1. chain 4,2 [83039] picpiclink
    2. chain 3 [23368] picpiclink
    3. chain 1 [23366] picpiclink
  3. 1fod picpic
    1. chain 4,2 [83052] picpiclink
    2. chain 3 [23371] picpiclink
    3. chain 1 [23369] picpiclink
  4. 1fmd picpic
    1. chain 4,2 [83051] picpiclink
    2. chain 3 [23374] picpiclink
    3. chain 1 [23372] picpiclink
Enter search key:
MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk