Structural Classification of Proteins
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Protein: Exonuclease domain of phi29 DNA polymerase from Bacteriophage phi-29 [TaxId: 10756]

SQ P03680

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: Ribonuclease H-like motif [53066]
    3 layers: a/b/a; mixed beta-sheet of 5 strands, order 32145; strand 2 is antiparallel to the rest
  4. Superfamily: Ribonuclease H-like [53098]
    consists of one domain of this fold
    link to SUPERFAMILY database - Superfamily
  5. Family: DnaQ-like 3'-5' exonuclease [53118]
    contains Pfam 00929
  6. Protein: Exonuclease domain of phi29 DNA polymerase [117650]
  7. Species: Bacteriophage phi-29 [TaxId: 10756] [117651]
    SQ P03680

PDB Entry Domains:

  1. 2py5 picpicxrefxref
    automatically matched to d1xhxa1
    complexed with edo; mutant
    1. region a:5-187 [149928] picpiclink
  2. 2py5 picpicxrefxref
    automatically matched to d1xhxa1
    complexed with edo; mutant
    1. region b:5-187 [149930] picpiclink
  3. 2pyj picpicxrefxref
    automatically matched to d1xhxa1
    complexed with dgt, doc, edo, mg, mn; mutant
    1. region a:5-187 [149943] picpiclink
  4. 2pyj picpicxrefxref
    automatically matched to d1xhxa1
    complexed with dgt, doc, edo, mg, mn; mutant
    1. region b:5-187 [149945] picpiclink
  5. 2pyl picpicxref
    automatically matched to d1xhxa1
    complexed with 2da, edo, mg, ttp; mutant
    1. region a:5-187 [149947] picpiclink
  6. 1xhx picpicxref
    complexed with mg, so4; mutant
    1. region a:5-187 [115305] picpiclink
  7. 1xi1 picpicxref
    complexed with mg; mutant
    1. region a:5-187 [115309] picpiclink
  8. 1xhz picpicxref
    mutant
    1. region a:5-187 [115307] picpiclink
  9. 2pzs picpicxrefxrefxrefxref
    automatically matched to d1xhxa1
    mutant
    1. region a:5-187 [149965] picpiclink
  10. 2pzs picpicxrefxrefxrefxref
    automatically matched to d1xhxa1
    mutant
    1. region b:5-187 [149967] picpiclink
  11. 2pzs picpicxrefxrefxrefxref
    automatically matched to d1xhxa1
    mutant
    1. region c:5-187 [149969] picpiclink
  12. 2pzs picpicxrefxrefxrefxref
    automatically matched to d1xhxa1
    mutant
    1. region d:5-187 [149971] picpiclink
  13. 2ex3 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    complexed with pb; mutant
    1. region a:6-187 [132498] picpiclink
  14. 2ex3 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to 2EX3 A:6-187
    complexed with pb; mutant
    1. region c:6-187 [132501] picpiclink
  15. 2ex3 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to 2EX3 A:6-187
    complexed with pb; mutant
    1. region e:6-187 [132504] picpiclink
  16. 2ex3 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to 2EX3 A:6-187
    complexed with pb; mutant
    1. region g:6-187 [132507] picpiclink
  17. 2ex3 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to 2EX3 A:6-187
    complexed with pb; mutant
    1. region i:6-187 [132510] picpiclink
  18. 2ex3 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to 2EX3 A:6-187
    complexed with pb; mutant
    1. region k:6-187 [132513] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk