Family: DNA polymerase I

Lineage:

1. Root: scop
2. Class: Multi-domain proteins (alpha and beta) [56572]
   Folds consisting of two or more domains belonging to different classes
3. Fold: DNA/RNA polymerases [56671]
   divided into morphological domains including "palm", "thumb" and "fingers"; the catalytic "palm" domain is conserved to all members
4. Superfamily: DNA/RNA polymerases [56672]
   "palm" domain has a ferredoxin-like fold, related to that of an adenylyl cyclase domain
   uperfamily
5. Family: DNA polymerase I [56673]

Protein Domains:

1. DNA polymerase I (Klenow fragment) [56674]
   1. Escherichia coli [TaxId: 562] [56675] (14)
   2. Thermus aquaticus [TaxId: 271] [56676] (13)
   3. Bacillus stearothermophilus, newly identified strain as yet unnamed [TaxId: 1422] [56677] (45)
      SQ Q5KWC1 299-878 # 99% sequence identity; Geobacillus kaustophilus TaxID:1462
      SQ Q45458 298-876 # 88% sequence identity
2. T7 phage DNA polymerase [56678]
   1. Bacteriophage T7 [TaxId: 10760] [56679] (16)
      SQ P00581
3. Family B DNA polymerase [56680]
   1. Escherichia coli [TaxId: 562] [103399] (1)
   2. Bacteriophage RB69 [TaxId: 12353] [56681] (27)
   3. Archaeon Thermococcus gorgonarius [TaxId: 71997] [56682] (3)
   4. Archaeon Thermococcus sp., 9on-7 [TaxId: 35749] [56683] (1)
   5. Archaeon Desulfurococcus tok [TaxId: 108142] [56684] (2)
   6. Archaeon Pyrococcus kodakaraensis [TaxId: 311400] [56685] (2)
      SQ P56689 1-758 # 93% sequence identity; Thermococcus kodakarensis KOD1 TaxID: 69014
   7. Sulfolobus solfataricus [TaxId: 2287] [118192] (1)
      SQ P26811 40-864
4. phi29 DNA polymerase [118193]
   1. Bacteriophage phi-29 [TaxId: 10756] [118194] (18)
      SQ P03680

Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009 Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk