Structural Classification of Proteins
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Family: RNA-dependent RNA-polymerase

Lineage:

  1. Root: scop
  2. Class: Multi-domain proteins (alpha and beta) [56572]
    Folds consisting of two or more domains belonging to different classes
  3. Fold: DNA/RNA polymerases [56671]
    divided into morphological domains including "palm", "thumb" and "fingers"; the catalytic "palm" domain is conserved to all members
  4. Superfamily: DNA/RNA polymerases [56672]
    "palm" domain has a ferredoxin-like fold, related to that of an adenylyl cyclase domain
    link to SUPERFAMILY database - Superfamily
  5. Family: RNA-dependent RNA-polymerase [56694]

Protein Domains:

  1. Viral RNA polymerase [56695]
    1. Poliovirus type 1, strain Mahoney [TaxId: 12080] [56696] (13) picpic
      SQ P03300 1748-2208
    2. Hepatitis C virus [TaxId: 11103] [56697] (30) picpic
    3. Rabbit hemorrhagic disease virus [TaxId: 11976] [69882] (2) picpic
    4. Norwalk virus [TaxId: 11983] [103400] (3) picpic
    5. Bovine viral diarrhea virus [TaxId: 11099] [103401] (3) picpic
    6. Human rhinovirus 1B, HRV-1B [TaxId: 12129] [111299] (1) picpic
      SQ P12916 1698-2157
    7. Human rhinovirus 16, HRV-16 [TaxId: 31708] [111300] (1) picpic
      SQ Q82122 1694-2153
    8. Human rhinovirus 14, HRV-14 [TaxId: 12131] [111301] (1) picpic
      SQ P03303 1720-2179
    9. Foot-and-mouth disease virus [TaxId: 12110] [111302] (10) picpic
      SQ Q9QCE4 1858-2327
    10. Avian infectious bursal disease virus [TaxId: 10995] [160955] (1) picpic
      SQ Q9Q6Q5 31-804
  2. Reovirus polymerase lambda3 [82841]
    contains additional N-terminal domain (res. 1-380) and C-terminal "bracelet" domain (res. 891-1267)
    1. Reovirus [TaxId: 10891] [82842] (5) picpic
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk