Family: gp120 core

Lineage:

1. Root: scop
2. Class: Alpha and beta proteins (a+b) [53931]
   Mainly antiparallel beta sheets (segregated alpha and beta regions)
3. Fold: gp120 core [56501]
   unusual fold
4. Superfamily: gp120 core [56502]
   uperfamily
5. Family: gp120 core [56503]

Protein Domains:

1. gp120 core [56504]
   1. Human immunodeficiency virus type 1 [TaxId: 11676] [56505] (24)
      1. 2ny2
         complexed with edo, hez, nag, suc; mutant
         1. region a:83-491 [145704]
      2. 2nxy
         complexed with hez, nag, trs; mutant
         1. region a:83-491 [145701]
      3. 2ny4
         complexed with hez, nag, suc; mutant
         1. region a:83-491 [145706]
      4. 2ny3
         complexed with nag, suc; mutant
         1. region a:83-491 [145705]
      5. 2nxz
         complexed with edo, hez, ipa, nag, suc; mutant
         1. region a:83-491 [145702]
      6. 2ny1
         complexed with nag, suc; mutant
         1. region a:83-492 [145703]
      7. 2ny0
         complexed with hez, nag; mutant
         1. region a:83-491 [138757]
      8. 1yym
         automatically matched to d1g9ng_
         complexed with edo, ipa, mpt, nag, ndg, vlm; mutant
         1. region g:86-492 [124232]
      9. 1yym
         automatically matched to d1g9ng_
         complexed with edo, ipa, mpt, nag, ndg, vlm; mutant
         1. region p:1086-1492 [124237]
      10. 2i5y
          automatically matched to d1g9ng_
          complexed with bif, mpt, nag, ndg, vlm
          1. region g:86-492 [137071]
      11. 2i5y
          automatically matched to d1g9ng_
          complexed with bif, mpt, nag, ndg, vlm
          1. region p:86-492 [137076]
      12. 2ny7
          automatically matched to 2NY5 G:83-491
          complexed with nag; mutant
          1. region g:83-491 [145709]
      13. 2i60
          automatically matched to d1g9ng_
          complexed with ipa, mpt, nag, ndg, vlm
          1. region g:86-492 [137081]
      14. 2i60
          automatically matched to d1g9ng_
          complexed with ipa, mpt, nag, ndg, vlm
          1. region p:86-492 [137086]
      15. 2ny5
          complexed with nag, suc; mutant
          1. region g:83-491 [145707]
      16. 1g9m
          complexed with fuc, ioh, nag; mutant
          1. chain g [42492]
      17. 1rzj
          complexed with fuc, ioh, nag; mutant
          1. chain g [98200]
      18. 1yyl
          automatically matched to d1g9ng_
          complexed with bif, mpt, nag, ndg, vlm; mutant
          1. region g:86-492 [124222]
      19. 1yyl
          automatically matched to d1g9ng_
          complexed with bif, mpt, nag, ndg, vlm; mutant
          1. region p:1086-1492 [124227]
      20. 1gc1
          complexed with fuc, nag; mutant
          1. chain g [42493]
      21. 2ny6
          complexed with nag, suc; mutant
          1. region a:83-491 [145708]
      22. 1rzk
          complexed with nag; mutant
          1. chain g [98207]
      23. 1g9n
          complexed with nag; mutant
          1. chain g [42494]
      24. 2b4c
          complexed with fuc, nag, ndg, so4, xyl; mutant
          1. region g:84-492 [144950]

Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009 Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk