Superfamily: gp120 core

uperfamily

Lineage:

1. Root: scop
2. Class: Alpha and beta proteins (a+b) [53931]
   Mainly antiparallel beta sheets (segregated alpha and beta regions)
3. Fold: gp120 core [56501]
   unusual fold
4. Superfamily: gp120 core [56502]
   uperfamily

Families:

1. gp120 core [56503] (1)
   1. gp120 core [56504]
      1. Human immunodeficiency virus type 1 [TaxId: 11676] [56505] (24)
         1. 2ny2
            complexed with edo, hez, nag, suc; mutant
            1. region a:83-491 [145704]
         2. 2nxy
            complexed with hez, nag, trs; mutant
            1. region a:83-491 [145701]
         3. 2ny4
            complexed with hez, nag, suc; mutant
            1. region a:83-491 [145706]
         4. 2ny3
            complexed with nag, suc; mutant
            1. region a:83-491 [145705]
         5. 2nxz
            complexed with edo, hez, ipa, nag, suc; mutant
            1. region a:83-491 [145702]
         6. 2ny1
            complexed with nag, suc; mutant
            1. region a:83-492 [145703]
         7. 2ny0
            complexed with hez, nag; mutant
            1. region a:83-491 [138757]
         8. 1yym
            automatically matched to d1g9ng_
            complexed with edo, ipa, mpt, nag, ndg, vlm; mutant
            1. region g:86-492 [124232]
         9. 1yym
            automatically matched to d1g9ng_
            complexed with edo, ipa, mpt, nag, ndg, vlm; mutant
            1. region p:1086-1492 [124237]
         10. 2i5y
             automatically matched to d1g9ng_
             complexed with bif, mpt, nag, ndg, vlm
             1. region g:86-492 [137071]
         11. 2i5y
             automatically matched to d1g9ng_
             complexed with bif, mpt, nag, ndg, vlm
             1. region p:86-492 [137076]
         12. 2ny7
             automatically matched to 2NY5 G:83-491
             complexed with nag; mutant
             1. region g:83-491 [145709]
         13. 2i60
             automatically matched to d1g9ng_
             complexed with ipa, mpt, nag, ndg, vlm
             1. region g:86-492 [137081]
         14. 2i60
             automatically matched to d1g9ng_
             complexed with ipa, mpt, nag, ndg, vlm
             1. region p:86-492 [137086]
         15. 2ny5
             complexed with nag, suc; mutant
             1. region g:83-491 [145707]
         16. 1g9m
             complexed with fuc, ioh, nag; mutant
             1. chain g [42492]
         17. 1rzj
             complexed with fuc, ioh, nag; mutant
             1. chain g [98200]
         18. 1yyl
             automatically matched to d1g9ng_
             complexed with bif, mpt, nag, ndg, vlm; mutant
             1. region g:86-492 [124222]
         19. 1yyl
             automatically matched to d1g9ng_
             complexed with bif, mpt, nag, ndg, vlm; mutant
             1. region p:1086-1492 [124227]
         20. 1gc1
             complexed with fuc, nag; mutant
             1. chain g [42493]
         21. 2ny6
             complexed with nag, suc; mutant
             1. region a:83-491 [145708]
         22. 1rzk
             complexed with nag; mutant
             1. chain g [98207]
         23. 1g9n
             complexed with nag; mutant
             1. chain g [42494]
         24. 2b4c
             complexed with fuc, nag, ndg, so4, xyl; mutant
             1. region g:84-492 [144950]

Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009 Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk