Structural Classification of Proteins
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Protein: Spike protein S1 from SARS coronavirus [TaxId: 227859]

SQ P59594 320-502! SQ P59594 321-512! SQ P59594 323-502

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: SARS receptor-binding domain-like [143586]
    core: 3 layers, a/b/a; antiparallel beta-sheet of 5 strands, order 13542
  4. Superfamily: SARS receptor-binding domain-like [143587]
    link to SUPERFAMILY database - Superfamily
  5. Family: SARS receptor-binding domain-like [143588]
    part of PfamB 000266
  6. Protein: Spike protein S1 [143589]
  7. Species: SARS coronavirus [TaxId: 227859] [143590]
    SQ P59594 320-502! SQ P59594 321-512! SQ P59594 323-502

PDB Entry Domains:

  1. 2ghv picpic
    1. region c:320-502 [135214] picpiclink
  2. 2ghv picpic
    automatically matched to 2GHV C:320-502
    1. region e:320-502 [135215] picpiclink
  3. 2dd8 picpicxrefxrefxrefxref
    complexed with nag, po4
    1. region s:321-512 [131393] picpiclink
  4. 2ghw picpicxrefxrefxrefxref
    automatically matched to 2GHV C:320-502
    complexed with cl
    1. region a:320-502 [135216] picpiclink
  5. 2ghw picpicxrefxrefxrefxref
    automatically matched to 2GHV C:320-502
    complexed with cl
    1. region c:320-502 [135217] picpiclink
  6. 3d0g picpic
    automatically matched to d2dd8s1
    complexed with cl, nag, ndg, zn
    1. region e:324-502 [157170] picpiclink
  7. 3d0g picpic
    automatically matched to d2dd8s1
    complexed with cl, nag, ndg, zn
    1. region f:324-502 [157171] picpiclink
  8. 2ajf picpicxrefxref
    complexed with bma, cl, nag, zn
    1. region e:323-502 [126884] picpiclink
  9. 2ajf picpicxrefxref
    automatically matched to 2AJF E:323-502
    complexed with bma, cl, nag, zn
    1. region f:323-502 [126885] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk