Structural Classification of Proteins
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Family: SARS receptor-binding domain-like

part of PfamB 000266

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: SARS receptor-binding domain-like [143586]
    core: 3 layers, a/b/a; antiparallel beta-sheet of 5 strands, order 13542
  4. Superfamily: SARS receptor-binding domain-like [143587]
    link to SUPERFAMILY database - Superfamily
  5. Family: SARS receptor-binding domain-like [143588]
    part of PfamB 000266

Protein Domains:

  1. Spike protein S1 [143589]
    1. SARS coronavirus [TaxId: 227859] [143590] (9)
      SQ P59594 320-502! SQ P59594 321-512! SQ P59594 323-502
      1. 2ghv picpic
        1. region c:320-502 [135214] picpiclink
      2. 2ghv picpic
        automatically matched to 2GHV C:320-502
        1. region e:320-502 [135215] picpiclink
      3. 2dd8 picpicxrefxrefxrefxref
        complexed with nag, po4
        1. region s:321-512 [131393] picpiclink
      4. 2ghw picpicxrefxrefxrefxref
        automatically matched to 2GHV C:320-502
        complexed with cl
        1. region a:320-502 [135216] picpiclink
      5. 2ghw picpicxrefxrefxrefxref
        automatically matched to 2GHV C:320-502
        complexed with cl
        1. region c:320-502 [135217] picpiclink
      6. 3d0g picpic
        automatically matched to d2dd8s1
        complexed with cl, nag, ndg, zn
        1. region e:324-502 [157170] picpiclink
      7. 3d0g picpic
        automatically matched to d2dd8s1
        complexed with cl, nag, ndg, zn
        1. region f:324-502 [157171] picpiclink
      8. 2ajf picpicxrefxref
        complexed with bma, cl, nag, zn
        1. region e:323-502 [126884] picpiclink
      9. 2ajf picpicxrefxref
        automatically matched to 2AJF E:323-502
        complexed with bma, cl, nag, zn
        1. region f:323-502 [126885] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk