Structural Classification of Proteins
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Protein: Eukaryotic RPB5 C-terminal domain from Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

SQ P20434; part of multichain biological unit

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: RPB5-like RNA polymerase subunit [55286]
    core: beta-alpha-beta-alpha-beta(2); 2 layers, alpha/beta
  4. Superfamily: RPB5-like RNA polymerase subunit [55287]
    link to SUPERFAMILY database - Superfamily
  5. Family: RPB5 [55288]
  6. Protein: Eukaryotic RPB5 C-terminal domain [55292]
  7. Species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [55293]
    SQ P20434; part of multichain biological unit

PDB Entry Domains:

  1. 1dzf picpicxref
    1. region a:144-215 [39753] picpiclink
  2. 1twf picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    complexed with mn, utp, zn
    1. region e:144-215 [112730] picpiclink
  3. 1i50 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    complexed with mn, zn
    1. region e:144-215 [61759] picpiclink
  4. 1k83 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    complexed with ilx, mn, trx, zn
    1. region e:144-215 [68280] picpiclink
  5. 1i3q picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    complexed with mg, zn
    1. region e:144-215 [61612] picpiclink
  6. 2nvq picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1dzfa2
    complexed with dut, mg, zn
    1. region e:144-215 [138639] picpiclink
  7. 1twc picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    complexed with gtp, mn, zn
    1. region e:144-215 [112716] picpiclink
  8. 1twa picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    complexed with atp, mn, zn
    1. region e:144-215 [112701] picpiclink
  9. 1i6h picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    complexed with mg, zn
    1. region e:144-215 [61836] picpiclink
  10. 1twh picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    complexed with atp, mn, zn
    1. region e:144-215 [112756] picpiclink
  11. 1twg picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    complexed with ctp, mn, zn
    1. region e:144-215 [112743] picpiclink
  12. 2nvy picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1dzfa2
    complexed with mn, zn
    1. region e:144-215 [138685] picpiclink
  13. 2e2i picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1dzfa2
    complexed with dgt, mg, zn
    1. region e:144-215 [131999] picpiclink
  14. 2e2j picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1dzfa2
    complexed with g2p, mg, zn
    1. region e:144-215 [132012] picpiclink
  15. 2b63 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1dzfa2
    complexed with 5bu, mg, zn
    1. region e:144-215 [127923] picpiclink
  16. 2ja7 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1dzfa2
    complexed with bru, mg, tt, zn
    1. region e:144-215 [138196] picpiclink
  17. 2ja7 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1dzfa2
    complexed with bru, mg, tt, zn
    1. region q:144-215 [138212] picpiclink
  18. 2nvx picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1dzfa2
    complexed with dut, mg, zn
    1. region e:144-215 [138672] picpiclink
  19. 2nvt picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1dzfa2
    complexed with g2p, mg, zn
    1. region e:144-215 [138652] picpiclink
  20. 2ja5 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1dzfa2
    complexed with bru, mg, zn
    1. region e:144-215 [138164] picpiclink
  21. 2ja8 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1dzfa2
    complexed with bru, mg, tt, zn
    1. region e:144-215 [138228] picpiclink
  22. 2b8k picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1dzfa2
    complexed with zn
    1. region e:144-215 [128082] picpiclink
  23. 2ja6 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1dzfa2
    complexed with bru, mg, tt, zn
    1. region e:144-215 [138180] picpiclink
  24. 2yu9 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1dzfa2
    complexed with mg, utp, zn
    1. region e:144-215 [140069] picpiclink
  25. 2e2h picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1dzfa2
    complexed with gtp, mg, zn
    1. region e:144-215 [131986] picpiclink
  26. 2nvz picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1dzfa2
    complexed with mg, utp, zn
    1. region e:144-215 [138698] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk