Structural Classification of Proteins
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Protein: RNA polymerase subunit RBP8 from Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

SQ P20436

Lineage:

  1. Root: scop
  2. Class: All beta proteins [48724]
  3. Fold: OB-fold [50198]
    barrel, closed or partly opened n=5, S=10 or S=8; greek-key
  4. Superfamily: Nucleic acid-binding proteins [50249]
    link to SUPERFAMILY database - Superfamily
  5. Family: RNA polymerase subunit RBP8 [50321]
    duplication; contains tandem repeat of two incomplete OB-folds; forms a single barrel; n=8, S=10
  6. Protein: RNA polymerase subunit RBP8 [50322]
  7. Species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [50323]
    SQ P20436

PDB Entry Domains:

  1. 1twf picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    complexed with mn, utp, zn
    1. chain h [112732] picpiclink
  2. 1i50 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    complexed with mn, zn
    1. chain h [61761] picpiclink
  3. 1k83 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    complexed with ilx, mn, trx, zn
    1. chain h [68282] picpiclink
  4. 3cqz picpicxrefxrefxrefxrefxrefxref
    automatically matched to d1a1da_
    complexed with ilx, trx, zn
    1. region h:2-146 [156932] picpiclink
  5. 1i3q picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    complexed with mg, zn
    1. chain h [61614] picpiclink
  6. 2nvq picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1a1d__
    complexed with dut, mg, zn
    1. region h:2-146 [138641] picpiclink
  7. 1twc picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    complexed with gtp, mn, zn
    1. chain h [112718] picpiclink
  8. 1twa picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    complexed with atp, mn, zn
    1. chain h [112703] picpiclink
  9. 1i6h picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    complexed with mg, zn
    1. chain h [61838] picpiclink
  10. 1twh picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    complexed with atp, mn, zn
    1. chain h [112758] picpiclink
  11. 2r7z picpicxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1a1da_
    complexed with cpt, mg, zn
    1. region h:2-146 [151663] picpiclink
  12. 2r92 picpicxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1a1da_
    complexed with mg, zn
    1. region h:2-146 [151750] picpiclink
  13. 1twg picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    complexed with ctp, mn, zn
    1. chain h [112745] picpiclink
  14. 2nvy picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1a1d__
    complexed with mn, zn
    1. region h:2-146 [138687] picpiclink
  15. 2r93 picpicxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1a1da_
    complexed with mg, zn
    1. region h:2-146 [151759] picpiclink
  16. 2e2i picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1a1d__
    complexed with dgt, mg, zn
    1. region h:2-146 [132001] picpiclink
  17. 2vum picpicxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1a1da_
    complexed with bru, ilx, mg, trx, zn
    1. region h:2-146 [153553] picpiclink
  18. 2e2j picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1a1d__
    complexed with g2p, mg, zn
    1. region h:2-146 [132014] picpiclink
  19. 2b63 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1a1d__
    complexed with 5bu, mg, zn
    1. region h:2-146 [127926] picpiclink
  20. 2ja7 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1a1d__
    complexed with bru, mg, tt, zn
    1. region h:2-146 [138200] picpiclink
  21. 2ja7 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1a1d__
    complexed with bru, mg, tt, zn
    1. region t:2-146 [138216] picpiclink
  22. 2nvx picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1a1d__
    complexed with dut, mg, zn
    1. region h:2-146 [138674] picpiclink
  23. 2nvt picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1a1d__
    complexed with g2p, mg, zn
    1. region h:2-146 [138654] picpiclink
  24. 2ja5 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1a1d__
    complexed with bru, mg, zn
    1. region h:2-146 [138168] picpiclink
  25. 2ja8 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1a1d__
    complexed with bru, mg, tt, zn
    1. region h:2-146 [138232] picpiclink
  26. 2b8k picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1a1d__
    complexed with zn
    1. region h:2-146 [128086] picpiclink
  27. 2ja6 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1a1d__
    complexed with bru, mg, tt, zn
    1. region h:2-146 [138184] picpiclink
  28. 2yu9 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1a1d__
    complexed with mg, utp, zn
    1. region h:2-146 [140071] picpiclink
  29. 1a1d picpic
    CA-atoms only
    1. chain a [25394] picpiclink
  30. 2e2h picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1a1d__
    complexed with gtp, mg, zn
    1. region h:2-146 [131988] picpiclink
  31. 2nvz picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1a1d__
    complexed with mg, utp, zn
    1. region h:2-146 [138700] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk