Structural Classification of Proteins
home mail help root up expand collapse

Protein: Eukaryotic RPB5 N-terminal domain from Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

SQ P20434; part of multichain biological unit

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: Restriction endonuclease-like [52979]
    core: 3 layers, a/b/a; mixed beta-sheet of 5 strands, order 12345; strands 2 &, in some families, 5 are antiparallel to the rest
  4. Superfamily: Eukaryotic RPB5 N-terminal domain [53036]
    link to SUPERFAMILY database - Superfamily
  5. Family: Eukaryotic RPB5 N-terminal domain [53037]
  6. Protein: Eukaryotic RPB5 N-terminal domain [53038]
  7. Species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [53039]
    SQ P20434; part of multichain biological unit

PDB Entry Domains:

  1. 1dzf picpicxref
    1. region a:5-143 [33344] picpiclink
  2. 1twf picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    complexed with mn, utp, zn
    1. region e:1-143 [112729] picpiclink
  3. 1i50 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    complexed with mn, zn
    1. region e:1-143 [61758] picpiclink
  4. 1k83 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    complexed with ilx, mn, trx, zn
    1. region e:3-143 [68279] picpiclink
  5. 1i3q picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    complexed with mg, zn
    1. region e:1-143 [61611] picpiclink
  6. 2nvq picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1i3qe1
    complexed with dut, mg, zn
    1. region e:2-143 [138638] picpiclink
  7. 1twc picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    complexed with gtp, mn, zn
    1. region e:1-143 [112715] picpiclink
  8. 1twa picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    complexed with atp, mn, zn
    1. region e:1-143 [112700] picpiclink
  9. 1i6h picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    complexed with mg, zn
    1. region e:2-143 [61835] picpiclink
  10. 1twh picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    complexed with atp, mn, zn
    1. region e:1-143 [112755] picpiclink
  11. 1twg picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    complexed with ctp, mn, zn
    1. region e:1-143 [112742] picpiclink
  12. 2nvy picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1i3qe1
    complexed with mn, zn
    1. region e:2-143 [138684] picpiclink
  13. 2e2i picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1i3qe1
    complexed with dgt, mg, zn
    1. region e:3-143 [131998] picpiclink
  14. 2e2j picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1i3qe1
    complexed with g2p, mg, zn
    1. region e:2-143 [132011] picpiclink
  15. 2b63 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1i3qe1
    complexed with 5bu, mg, zn
    1. region e:2-143 [127922] picpiclink
  16. 2ja7 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1i3qe1
    complexed with bru, mg, tt, zn
    1. region e:2-143 [138195] picpiclink
  17. 2ja7 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1i3qe1
    complexed with bru, mg, tt, zn
    1. region q:2-143 [138211] picpiclink
  18. 2nvx picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1i3qe1
    complexed with dut, mg, zn
    1. region e:2-143 [138671] picpiclink
  19. 2nvt picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1i3qe1
    complexed with g2p, mg, zn
    1. region e:2-143 [138651] picpiclink
  20. 2ja5 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1i3qe1
    complexed with bru, mg, zn
    1. region e:2-143 [138163] picpiclink
  21. 2ja8 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1i3qe1
    complexed with bru, mg, tt, zn
    1. region e:2-143 [138227] picpiclink
  22. 2b8k picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1i3qe1
    complexed with zn
    1. region e:2-143 [128081] picpiclink
  23. 2ja6 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1i3qe1
    complexed with bru, mg, tt, zn
    1. region e:2-143 [138179] picpiclink
  24. 2yu9 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1i3qe1
    complexed with mg, utp, zn
    1. region e:2-143 [140068] picpiclink
  25. 2e2h picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1i3qe1
    complexed with gtp, mg, zn
    1. region e:3-143 [131985] picpiclink
  26. 2nvz picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1i3qe1
    complexed with mg, utp, zn
    1. region e:3-143 [138697] picpiclink
Enter search key:
MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk