Protein: Complete 12-subunit RNA polymerase II complex from Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Lineage:

1. Root: scop
2. Class: Low resolution protein structures [58117]
   Not a true class
3. Fold: RNA polymerase [58180]
4. Superfamily: RNA polymerase [58181]
   uperfamily
5. Family: RNA polymerase [58182]
6. Protein: Complete 12-subunit RNA polymerase II complex [90261]
7. Species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [90262]

PDB Entry Domains:

1. 3cqz
   automatically matched to d1wcma_
   complexed with ilx, trx, zn
   1. region a:6-1450 [156929]
2. 3cqz
   automatically matched to d1wcmk_
   complexed with ilx, trx, zn
   1. region k:2-114 [156934]
3. 2r7z
   automatically matched to d1wcma_
   complexed with cpt, mg, zn
   1. region a:2-1455 [151658]
4. 2r7z
   automatically matched to d1y1vd_
   complexed with cpt, mg, zn
   1. region d:4-221 [151660]
5. 2r7z
   automatically matched to d1wcmg_
   complexed with cpt, mg, zn
   1. region g:1-171 [151662]
6. 2r7z
   automatically matched to d1wcmk_
   complexed with cpt, mg, zn
   1. region k:1-114 [151665]
7. 2r92
   automatically matched to d1wcma_
   complexed with mg, zn
   1. region a:2-1455 [151745]
8. 2r92
   automatically matched to d1y1vd_
   complexed with mg, zn
   1. region d:4-221 [151747]
9. 2r92
   automatically matched to d1wcmg_
   complexed with mg, zn
   1. region g:1-171 [151749]
10. 2r92
    automatically matched to d1wcmk_
    complexed with mg, zn
    1. region k:1-112 [151752]
11. 2r93
    automatically matched to d1wcma_
    complexed with mg, zn
    1. region a:2-1455 [151754]
12. 2r93
    automatically matched to d1y1vd_
    complexed with mg, zn
    1. region d:4-221 [151756]
13. 2r93
    automatically matched to d1wcmg_
    complexed with mg, zn
    1. region g:1-171 [151758]
14. 2r93
    automatically matched to d1wcmk_
    complexed with mg, zn
    1. region k:1-112 [151761]
15. 2vum
    automatically matched to d1wcma_
    complexed with bru, ilx, mg, trx, zn
    1. region a:2-1455 [153548]
16. 2vum
    automatically matched to d1y1vd_
    complexed with bru, ilx, mg, trx, zn
    1. region d:4-221 [153550]
17. 2vum
    automatically matched to d1wcmg_
    complexed with bru, ilx, mg, trx, zn
    1. region g:1-171 [153552]
18. 2vum
    automatically matched to d1wcmk_
    complexed with bru, ilx, mg, trx, zn
    1. region k:1-114 [153555]
19. 2b63
    low resulution structure
    complexed with 5bu, mg, zn
    1. region g:1-79 [127925]
20. 2b63
    low resulution structure
    complexed with 5bu, mg, zn
    1. region d:15-75 [127921]
21. 2ja7
    automatically matched to 2B63 D:15-75
    complexed with bru, mg, tt, zn
    1. region d:15-75 [138194]
22. 2ja7
    automatically matched to 2B63 D:15-75
    complexed with bru, mg, tt, zn
    1. region p:15-75 [138210]
23. 1wcm
    1. chain a [114510]
    2. chain b [114511]
    3. chain c [114512]
    4. chain d [114513]
    5. chain e [114514]
    6. chain f [114515]
    7. chain g [114516]
    8. chain h [114517]
    9. chain i [114518]
    10. chain j [114519]
    11. chain k [114520]
    12. chain l [114521]
24. 2ja5
    automatically matched to 2B63 D:15-75
    complexed with bru, mg, zn
    1. region d:15-75 [138162]
25. 2ja8
    automatically matched to 2B63 D:15-75
    complexed with bru, mg, tt, zn
    1. region d:15-75 [138226]
26. 1y1w
    1. chain a [116362]
    2. chain b [116363]
    3. chain c [116364]
    4. chain d [116365]
    5. chain e [116366]
    6. chain f [116367]
    7. chain g [116368]
    8. chain h [116369]
    9. chain i [116370]
    10. chain j [116371]
    11. chain k [116372]
    12. chain l [116373]
27. 2b8k
    automatically matched to 2B63 D:15-75
    complexed with zn
    1. region d:15-75 [128080]
28. 1pqv
    complexed with transcription elongation factor S-II
    1. chain a [95028]
    2. chain b [95029]
    3. chain c [95030]
    4. chain d [95031]
    5. chain e [95032]
    6. chain f [95033]
    7. chain g [95034]
    8. chain h [95035]
    9. chain i [95036]
    10. chain j [95037]
    11. chain k [95038]
    12. chain l [95039]
    13. chain s [95040]
29. 1y1v
    1. chain a [116349]
    2. chain b [116350]
    3. chain c [116351]
    4. chain d [116352]
    5. chain e [116353]
    6. chain f [116354]
    7. chain g [116355]
    8. chain h [116356]
    9. chain i [116357]
    10. chain j [116358]
    11. chain k [116359]
    12. chain l [116360]
    13. chain s [116361]
30. 2ja6
    automatically matched to 2B63 D:15-75
    complexed with bru, mg, tt, zn
    1. region d:15-75 [138178]
31. 1nt9
    1. chain a [86151]
    2. chain b [86152]
    3. chain c [86153]
    4. chain d [86154]
    5. chain e [86155]
    6. chain f [86156]
    7. chain g [86157]
    8. chain h [86158]
    9. chain i [86159]
    10. chain j [86160]
    11. chain k [86161]
    12. chain l [86162]
32. 1nik
    1. chain a [85743]
    2. chain b [85744]
    3. chain c [85745]
    4. chain d [85746]
    5. chain e [85747]
    6. chain f [85748]
    7. chain g [85749]
    8. chain h [85750]
    9. chain i [85751]
    10. chain j [85752]
    11. chain k [85753]
    12. chain l [85754]
33. 1y1y
    1. chain a [116376]
    2. chain b [116377]
    3. chain c [116378]
    4. chain d [116379]
    5. chain e [116380]
    6. chain f [116381]
    7. chain g [116382]
    8. chain h [116383]
    9. chain i [116384]
    10. chain j [116385]
    11. chain k [116386]
    12. chain l [116387]
    13. chain s [116388]
34. 1r9s
    1. chain a [111729]
    2. chain b [111730]
    3. chain c [111731]
    4. chain e [111732]
    5. chain f [111733]
    6. chain h [111734]
    7. chain i [111735]
    8. chain j [111736]
    9. chain k [111737]
    10. chain l [111738]
35. 1y77
    1. chain a [116512]
    2. chain b [116513]
    3. chain c [116514]
    4. chain d [116515]
    5. chain e [116516]
    6. chain f [116517]
    7. chain g [116518]
    8. chain h [116519]
    9. chain i [116520]
    10. chain j [116521]
    11. chain k [116522]
    12. chain l [116523]
36. 1r5u
    complexed with transcription elongation factor TFIIB
    1. chain a [97105]
    2. chain b [97106]
    3. chain c [97107]
    4. chain e [97108]
    5. chain f [97109]
    6. chain h [97110]
    7. chain i [97111]
    8. chain j [97112]
    9. chain k [97113]
    10. chain l [97114]
    11. chain m [97115]
37. 1r9t
    1. chain a [111739]
    2. chain b [111740]
    3. chain c [111741]
    4. chain e [111742]
    5. chain f [111743]
    6. chain h [111744]
    7. chain i [111745]
    8. chain j [111746]
    9. chain k [111747]
    10. chain l [111748]
38. 1sfo
    strand separated elongation complex
    1. chain a [98834]
    2. chain b [98835]
    3. chain c [98836]
    4. chain e [98837]
    5. chain f [98838]
    6. chain h [98839]
    7. chain i [98840]
    8. chain j [98841]
    9. chain k [98842]
    10. chain l [98843]

Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009 Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk