Structural Classification of Proteins
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Family: Eukaryotic RPB5 N-terminal domain

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: Restriction endonuclease-like [52979]
    core: 3 layers, a/b/a; mixed beta-sheet of 5 strands, order 12345; strands 2 &, in some families, 5 are antiparallel to the rest
  4. Superfamily: Eukaryotic RPB5 N-terminal domain [53036]
    link to SUPERFAMILY database - Superfamily
  5. Family: Eukaryotic RPB5 N-terminal domain [53037]

Protein Domains:

  1. Eukaryotic RPB5 N-terminal domain [53038]
    1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [53039] (26)
      SQ P20434; part of multichain biological unit
      1. 1dzf picpicxref
        1. region a:5-143 [33344] picpiclink
      2. 1twf picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        complexed with mn, utp, zn
        1. region e:1-143 [112729] picpiclink
      3. 1i50 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        complexed with mn, zn
        1. region e:1-143 [61758] picpiclink
      4. 1k83 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        complexed with ilx, mn, trx, zn
        1. region e:3-143 [68279] picpiclink
      5. 1i3q picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        complexed with mg, zn
        1. region e:1-143 [61611] picpiclink
      6. 2nvq picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1i3qe1
        complexed with dut, mg, zn
        1. region e:2-143 [138638] picpiclink
      7. 1twc picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        complexed with gtp, mn, zn
        1. region e:1-143 [112715] picpiclink
      8. 1twa picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        complexed with atp, mn, zn
        1. region e:1-143 [112700] picpiclink
      9. 1i6h picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        complexed with mg, zn
        1. region e:2-143 [61835] picpiclink
      10. 1twh picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        complexed with atp, mn, zn
        1. region e:1-143 [112755] picpiclink
      11. 1twg picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        complexed with ctp, mn, zn
        1. region e:1-143 [112742] picpiclink
      12. 2nvy picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1i3qe1
        complexed with mn, zn
        1. region e:2-143 [138684] picpiclink
      13. 2e2i picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1i3qe1
        complexed with dgt, mg, zn
        1. region e:3-143 [131998] picpiclink
      14. 2e2j picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1i3qe1
        complexed with g2p, mg, zn
        1. region e:2-143 [132011] picpiclink
      15. 2b63 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1i3qe1
        complexed with 5bu, mg, zn
        1. region e:2-143 [127922] picpiclink
      16. 2ja7 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1i3qe1
        complexed with bru, mg, tt, zn
        1. region e:2-143 [138195] picpiclink
      17. 2ja7 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1i3qe1
        complexed with bru, mg, tt, zn
        1. region q:2-143 [138211] picpiclink
      18. 2nvx picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1i3qe1
        complexed with dut, mg, zn
        1. region e:2-143 [138671] picpiclink
      19. 2nvt picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1i3qe1
        complexed with g2p, mg, zn
        1. region e:2-143 [138651] picpiclink
      20. 2ja5 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1i3qe1
        complexed with bru, mg, zn
        1. region e:2-143 [138163] picpiclink
      21. 2ja8 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1i3qe1
        complexed with bru, mg, tt, zn
        1. region e:2-143 [138227] picpiclink
      22. 2b8k picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1i3qe1
        complexed with zn
        1. region e:2-143 [128081] picpiclink
      23. 2ja6 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1i3qe1
        complexed with bru, mg, tt, zn
        1. region e:2-143 [138179] picpiclink
      24. 2yu9 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1i3qe1
        complexed with mg, utp, zn
        1. region e:2-143 [140068] picpiclink
      25. 2e2h picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1i3qe1
        complexed with gtp, mg, zn
        1. region e:3-143 [131985] picpiclink
      26. 2nvz picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1i3qe1
        complexed with mg, utp, zn
        1. region e:3-143 [138697] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk