Structural Classification of Proteins
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Protein: Class II MHC beta chain, N-terminal domain from Mouse (Mus musculus), I-EK [TaxId: 10090]

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: MHC antigen-recognition domain [54451]
    dimeric
  4. Superfamily: MHC antigen-recognition domain [54452]
    link to SUPERFAMILY database - Superfamily
  5. Family: MHC antigen-recognition domain [54453]
  6. Protein: Class II MHC beta chain, N-terminal domain [88819]
  7. Species: Mouse (Mus musculus), I-EK [TaxId: 10090] [88827]

PDB Entry Domains:

  1. 1fng picpicxrefxrefxref
    contains covalently bound peptides at the N-termini of chains B and D
    complexed with nag
    1. region b:4-92 [59907] picpiclink
    2. region d:4-92 [59911] picpiclink
  2. 1fne picpicxrefxrefxref
    contains covalently bound peptides at the N-termini of chains B and D
    complexed with nag; mutant
    1. region b:4-92 [59899] picpiclink
    2. region d:4-92 [59903] picpiclink
  3. 1iea picpicxrefxrefxref
    contains covalently bound peptides at the N-termini of chains B and D
    complexed with nag
    1. region b:4-92 [38206] picpiclink
    2. region d:4-92 [38208] picpiclink
  4. 1i3r picpicxrefxrefxref
    contains covalently bound peptides at the N-termini of chains B, D, F and H
    complexed with nag; mutant
    1. region b:1-120 [61623] picpiclink
    2. region d:1-120 [61627] picpiclink
    3. region f:1-120 [61631] picpiclink
    4. region h:1-120 [61635] picpiclink
  5. 1ktd picpicxrefxrefxref
    contains covalently bound peptides at the N-termini of chains B and D
    complexed with nag, so4; mutant
    1. region b:1-120 [72967] picpiclink
    2. region d:1-120 [72971] picpiclink
  6. 1r5v picpicxrefxrefxref
    1. region b:31-120 [97119] picpiclink
    2. region d:31-120 [97123] picpiclink
  7. 1kt2 picpicxrefxrefxref
    contains covalently bound peptides at the N-termini of chains B and D
    complexed with nag
    1. region b:2-120 [72954] picpiclink
    2. region d:2-120 [72958] picpiclink
  8. 1ieb picpicxrefxrefxref
    contains covalently bound peptides at the N-termini of chains B and D
    complexed with nag, so4
    1. region b:4-92 [38210] picpiclink
    2. region d:4-92 [38212] picpiclink
  9. 1r5w picpicxrefxrefxref
    mutant
    1. region b:31-120 [97127] picpiclink
    2. region d:31-120 [97131] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk