Structural Classification of Proteins
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Protein: Nedd8 from Human (Homo sapiens) [TaxId: 9606]

SQ Q15843

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: beta-Grasp (ubiquitin-like) [54235]
    core: beta(2)-alpha-beta(2); mixed beta-sheet 2143
  4. Superfamily: Ubiquitin-like [54236]
    link to SUPERFAMILY database - Superfamily
  5. Family: Ubiquitin-related [54237]
    Pfam 00240
  6. Protein: Nedd8 [54244]
  7. Species: Human (Homo sapiens) [TaxId: 9606] [54245]
    SQ Q15843

PDB Entry Domains:

  1. 1ndd picpic
    complexed with cli, so4
    1. chain a [37599] picpiclink
    2. chain b [37600] picpiclink
    3. chain c [37601] picpiclink
    4. chain d [37602] picpiclink
  2. 2bkr picpicxref
    automatically matched to d1nddb_
    1. region b:1-76 [128711] picpiclink
  3. 1xt9 picpicxref
    1. chain b [116014] picpiclink
  4. 2nvu picpicxrefxrefxrefxref
    automatically matched to d1nddb_
    complexed with atp, mg, zn; mutant
    1. region i:1-76 [138663] picpiclink
  5. 2nvu picpicxrefxrefxrefxref
    automatically matched to d1nddb_
    complexed with atp, mg, zn; mutant
    1. region j:1-76 [138664] picpiclink
  6. 1r4m picpicxrefxref
    complexed with APPBP1 and UBA3
    complexed with zn; mutant
    1. chain i [97007] picpiclink
    2. chain j [97008] picpiclink
    3. chain k [97009] picpiclink
    4. chain l [97010] picpiclink
  7. 1r4n picpicxrefxref
    complexed with APPBP1 and UBA3
    complexed with atp, zn; mutant
    1. chain i [97019] picpiclink
    2. chain j [97020] picpiclink
    3. chain k [97021] picpiclink
    4. chain l [97022] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk