Structural Classification of Proteins
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Protein: Mitochondrial processing peptidase (MPP) alpha chain from Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: LuxS/MPP-like metallohydrolase [63410]
    core: beta-alpha-beta(2)-alpha(2); 2 layers: alpha/beta
  4. Superfamily: LuxS/MPP-like metallohydrolase [63411]
    Share the same "active site motif" HxxEH located in the first core helix, but differ in one of the zinc-binding residues
    link to SUPERFAMILY database - Superfamily
  5. Family: MPP-like [63412]
    Common fold elaborated with many additional structures; duplication: each family member consists of two similar domains of beta(2)-alpha(2)-beta(2)-alpha(5)-beta structure, but only the N-terminal domain of MPP beta chain binds the catalytic metal
  6. Protein: Mitochondrial processing peptidase (MPP) alpha chain [64302]
  7. Species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [64303]

PDB Entry Domains:

  1. 1hr6 picpicxref
    complexed with epe, zn
    1. region a:14-233 [61164] picpiclink
    2. region a:234-470 [61165] picpiclink
    3. region c:16-233 [61168] picpiclink
    4. region c:234-468 [61169] picpiclink
    5. region e:14-233 [61172] picpiclink
    6. region e:234-468 [61173] picpiclink
    7. region g:14-233 [61176] picpiclink
    8. region g:234-470 [61177] picpiclink
  2. 1hr7 picpicxref
    complexed with zn; mutant
    1. region a:14-233 [61180] picpiclink
    2. region a:234-470 [61181] picpiclink
    3. region c:16-233 [61184] picpiclink
    4. region c:234-468 [61185] picpiclink
    5. region e:14-233 [61188] picpiclink
    6. region e:234-468 [61189] picpiclink
    7. region g:14-233 [61192] picpiclink
    8. region g:234-467 [61193] picpiclink
  3. 1hr8 picpicxref
    complexed with epe, zn; mutant
    1. region a:14-233 [61196] picpiclink
    2. region a:234-470 [61197] picpiclink
    3. region c:16-233 [61200] picpiclink
    4. region c:234-468 [61201] picpiclink
    5. region e:14-233 [61204] picpiclink
    6. region e:234-468 [61205] picpiclink
    7. region g:14-233 [61208] picpiclink
    8. region g:234-470 [61209] picpiclink
  4. 1hr9 picpicxref
    complexed with epe, zn; mutant
    1. region a:14-233 [61212] picpiclink
    2. region a:234-470 [61213] picpiclink
    3. region c:16-233 [61216] picpiclink
    4. region c:234-468 [61217] picpiclink
    5. region e:14-233 [61220] picpiclink
    6. region e:234-468 [61221] picpiclink
    7. region g:14-233 [61224] picpiclink
    8. region g:234-468 [61225] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk