Structural Classification of Proteins
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Protein: Mitochondrial processing peptidase (MPP) beta chain from Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: LuxS/MPP-like metallohydrolase [63410]
    core: beta-alpha-beta(2)-alpha(2); 2 layers: alpha/beta
  4. Superfamily: LuxS/MPP-like metallohydrolase [63411]
    Share the same "active site motif" HxxEH located in the first core helix, but differ in one of the zinc-binding residues
    link to SUPERFAMILY database - Superfamily
  5. Family: MPP-like [63412]
    Common fold elaborated with many additional structures; duplication: each family member consists of two similar domains of beta(2)-alpha(2)-beta(2)-alpha(5)-beta structure, but only the N-terminal domain of MPP beta chain binds the catalytic metal
  6. Protein: Mitochondrial processing peptidase (MPP) beta chain [64300]
  7. Species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [64301]

PDB Entry Domains:

  1. 1hr6 picpicxref
    complexed with epe, zn
    1. region b:24-245 [61166] picpiclink
    2. region b:246-462 [61167] picpiclink
    3. region d:20-245 [61170] picpiclink
    4. region d:246-462 [61171] picpiclink
    5. region f:20-245 [61174] picpiclink
    6. region f:246-462 [61175] picpiclink
    7. region h:23-245 [61178] picpiclink
    8. region h:246-462 [61179] picpiclink
  2. 1hr7 picpicxref
    complexed with zn; mutant
    1. region b:24-245 [61182] picpiclink
    2. region b:246-462 [61183] picpiclink
    3. region d:22-245 [61186] picpiclink
    4. region d:246-462 [61187] picpiclink
    5. region f:23-245 [61190] picpiclink
    6. region f:246-462 [61191] picpiclink
    7. region h:23-245 [61194] picpiclink
    8. region h:246-462 [61195] picpiclink
  3. 1hr8 picpicxref
    complexed with epe, zn; mutant
    1. region b:24-245 [61198] picpiclink
    2. region b:246-462 [61199] picpiclink
    3. region d:20-245 [61202] picpiclink
    4. region d:246-462 [61203] picpiclink
    5. region f:20-245 [61206] picpiclink
    6. region f:246-462 [61207] picpiclink
    7. region h:22-245 [61210] picpiclink
    8. region h:246-462 [61211] picpiclink
  4. 1hr9 picpicxref
    complexed with epe, zn; mutant
    1. region b:24-245 [61214] picpiclink
    2. region b:246-462 [61215] picpiclink
    3. region d:22-245 [61218] picpiclink
    4. region d:246-462 [61219] picpiclink
    5. region f:20-245 [61222] picpiclink
    6. region f:246-462 [61223] picpiclink
    7. region h:23-245 [61226] picpiclink
    8. region h:246-462 [61227] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk