Structural Classification of Proteins
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Protein: NAD-dependent deacetylase NpdA from Thermotoga maritima [TaxId: 2336]

SQ Q9WYW0 1-245

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: DHS-like NAD/FAD-binding domain [52466]
    3 layers: a/b/a; parallel beta-sheet of 6 strands, order 321456; Rossmann-like
  4. Superfamily: DHS-like NAD/FAD-binding domain [52467]
    binds cofactor molecules in the opposite direction than classical Rossmann fold
    link to SUPERFAMILY database - Superfamily
  5. Family: Sir2 family of transcriptional regulators [63984]
    silent information regulator 2; contains insertion of a rubredoxin-like zinc finger domain
  6. Protein: NAD-dependent deacetylase NpdA [142126]
  7. Species: Thermotoga maritima [TaxId: 2336] [142127]
    SQ Q9WYW0 1-245

PDB Entry Domains:

  1. 1yc5 picpic
    complexed with nca, zn
    1. region a:1-245 [122910] picpiclink
  2. 2h2g picpic
    automatically matched to 1YC5 A:1-245
    complexed with zn
    1. region a:1-245 [136005] picpiclink
  3. 2h2d picpic
    automatically matched to 1YC5 A:1-245
    complexed with zn
    1. region a:1-245 [135997] picpiclink
  4. 2h2i picpic
    automatically matched to 1YC5 A:1-245
    complexed with zn, zpg
    1. region a:1-244 [136007] picpiclink
  5. 3d4b picpic
    automatically matched to d1yc5a1
    complexed with dzd, zn
    1. region a:1-245 [157291] picpiclink
  6. 2h4f picpic
    automatically matched to 1YC5 A:1-245
    complexed with nad, zn
    1. region a:1-245 [136073] picpiclink
  7. 2h2h picpic
    automatically matched to 1YC5 A:1-245
    complexed with zn
    1. region a:1-245 [136006] picpiclink
  8. 2h4j picpic
    automatically matched to 1YC5 A:1-245
    complexed with nca, oad, zn
    1. region a:1-245 [136076] picpiclink
  9. 2h2f picpic
    automatically matched to 1YC5 A:1-245
    complexed with zn
    1. region a:1-245 [136004] picpiclink
  10. 3d81 picpic
    automatically matched to d1yc5a1
    complexed with fzn, zn
    1. region a:1-245 [157437] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk