Structural Classification of Proteins
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Protein: AF0112, Sir2 homolog (Sir2-AF2) from Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: DHS-like NAD/FAD-binding domain [52466]
    3 layers: a/b/a; parallel beta-sheet of 6 strands, order 321456; Rossmann-like
  4. Superfamily: DHS-like NAD/FAD-binding domain [52467]
    binds cofactor molecules in the opposite direction than classical Rossmann fold
    link to SUPERFAMILY database - Superfamily
  5. Family: Sir2 family of transcriptional regulators [63984]
    silent information regulator 2; contains insertion of a rubredoxin-like zinc finger domain
  6. Protein: AF0112, Sir2 homolog (Sir2-AF2) [82380]
  7. Species: Archaeon Archaeoglobus fulgidus [TaxId: 2234] [82381]

PDB Entry Domains:

  1. 1ma3 picpic
    complexed with an acetylated p53 peptide, chain B
    complexed with aly, mes, zn
    1. chain a [78883] picpiclink
  2. 1s7g picpic
    complexed with 1pe, 2pe, apr, egl, nad, p6g, pg4, so4, zn
    1. chain a [98642] picpiclink
    2. chain b [98643] picpiclink
    3. chain c [98644] picpiclink
    4. chain d [98645] picpiclink
    5. chain e [98646] picpiclink
  3. 1yc2 picpic
    automatically matched to d1ma3a_
    complexed with 2pe, apr, edo, nad, nca, pg4, pge, so4, zn
    1. region a:1-252 [122903] picpiclink
  4. 1yc2 picpic
    automatically matched to d1ma3a_
    complexed with 2pe, apr, edo, nad, nca, pg4, pge, so4, zn
    1. region b:1-252 [122904] picpiclink
  5. 1yc2 picpic
    automatically matched to d1ma3a_
    complexed with 2pe, apr, edo, nad, nca, pg4, pge, so4, zn
    1. region c:1-252 [122905] picpiclink
  6. 1yc2 picpic
    automatically matched to d1ma3a_
    complexed with 2pe, apr, edo, nad, nca, pg4, pge, so4, zn
    1. region d:2-252 [122906] picpiclink
  7. 1yc2 picpic
    automatically matched to d1ma3a_
    complexed with 2pe, apr, edo, nad, nca, pg4, pge, so4, zn
    1. region e:1-250 [122907] picpiclink

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site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk