Structural Classification of Proteins
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Protein: Pyruvate decarboxylase from Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: DHS-like NAD/FAD-binding domain [52466]
    3 layers: a/b/a; parallel beta-sheet of 6 strands, order 321456; Rossmann-like
  4. Superfamily: DHS-like NAD/FAD-binding domain [52467]
    binds cofactor molecules in the opposite direction than classical Rossmann fold
    link to SUPERFAMILY database - Superfamily
  5. Family: Pyruvate oxidase and decarboxylase, middle domain [52475]
    N-terminal domain is Pyr module, and C-terminal domain is PP module of thiamin diphosphate-binding fold
  6. Protein: Pyruvate decarboxylase [52478]
    rudiment domain with a variant fold, lacks FAD-binding
  7. Species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [52480]

PDB Entry Domains:

  1. 1pvd picpicxrefxref
    complexed with mg, tpp
    1. region a:182-360 [31737] picpiclink
    2. region b:182-360 [31738] picpiclink
  2. 1qpb picpicxrefxref
    1. region a:182-360 [31739] picpiclink
    2. region b:182-360 [31740] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk