Structural Classification of Proteins
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Family: SpoU-like RNA 2'-O ribose methyltransferase

contains extra strand (3) in the parallel beta-sheet, order 321546

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: alpha/beta knot [75216]
    core: 3 layers: a/b/a, parallel beta-sheet of 5 strands, order 21435; contains a deep trefoil knot
  4. Superfamily: alpha/beta knot [75217]
    known or predicted SAM-dependent methytransferases including the SPOUT 'sequence' superfamily
    all known members have dimeric structures
    link to SUPERFAMILY database - Superfamily
  5. Family: SpoU-like RNA 2'-O ribose methyltransferase [75218]
    contains extra strand (3) in the parallel beta-sheet, order 321546

Protein Domains:

  1. tRNA (Gm18) methyltransferase TrmH [102279]
    1. Thermus thermophilus [TaxId: 274] [102280] (1) picpic
  2. Hypothetical tRNA/rRNA methyltransfease HI0766 (YibK homologue) [82374]
    1. Haemophilus influenzae [TaxId: 727] [82375] (2) picpic
  3. RrmA (RrmH), C-terminal domain [75219]
    23S rRNA methyltransferase; proposed gene names are as appear in the original publication (and the PDB entry)
    1. Thermus thermophilus [TaxId: 274] [75220] (1) picpic
  4. RlmB, C-terminal domain [82376]
    23S rRNA G2251 2'O-methytransferase
    1. Escherichia coli [TaxId: 562] [82377] (1) picpic
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk