Structural Classification of Proteins
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Protein: Trimethylamine dehydrogenase, N-terminal domain from Methylophilus methylotrophus, w3a1 [TaxId: 17]

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: TIM beta/alpha-barrel [51350]
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. Superfamily: FMN-linked oxidoreductases [51395]
    link to SUPERFAMILY database - Superfamily
  5. Family: FMN-linked oxidoreductases [51396]
  6. Protein: Trimethylamine dehydrogenase, N-terminal domain [51406]
    two other domains are alpha/beta Rossmann-like fold and beta/beta/alpha fold
  7. Species: Methylophilus methylotrophus, w3a1 [TaxId: 17] [51407]

PDB Entry Domains:

  1. 1djq picpicxrefxref
    1. region a:1-340 [28614] picpiclink
    2. region b:1-340 [28615] picpiclink
  2. 1djn picpicxrefxref
    1. region a:1-340 [28612] picpiclink
    2. region b:1-340 [28613] picpiclink
  3. 1o94 picpicxrefxrefxrefxref
    complexed with adp, amp, fmn, sf4
    1. region a:1-340 [81200] picpiclink
    2. region b:1-340 [81203] picpiclink
  4. 2tmd picpicxrefxref
    complexed with adp, fmn, fs4
    1. region a:1-340 [28616] picpiclink
    2. region b:1-340 [28617] picpiclink
  5. 1o95 picpicxrefxrefxrefxref
    complexed with adp, amp, fmn, fs4
    1. region a:1-340 [81210] picpiclink
    2. region b:1-340 [81213] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk