Structural Classification of Proteins
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Protein: DNA repair endonuclease XPF from Aeropyrum pernix [TaxId: 56636]

SQ Q9YC15 160-229

Lineage:

  1. Root: scop
  2. Class: All alpha proteins [46456]
  3. Fold: SAM domain-like [47768]
    4-5 helices; bundle of two orthogonally packed alpha-hairpins; involved in the interactions with DNA and proteins
  4. Superfamily: RuvA domain 2-like [47781]
    duplication: contains two helix-hairpin-helix (HhH) motifs
    link to SUPERFAMILY database - Superfamily
  5. Family: Hef domain-like [140629]
    helicase/nuclease domain; forms homo and heterodimers; probably includes the Excinuclease UvrC C-terminal domain (scop_fa 81795, that contains a single NMR structure of a monomeric truncated domain, 1kft)
  6. Protein: DNA repair endonuclease XPF [140634]
  7. Species: Aeropyrum pernix [TaxId: 56636] [140635]
    SQ Q9YC15 160-229

PDB Entry Domains:

  1. 2bgw picpicxrefxref
    complexed with mg, so4
    1. region a:160-229 [128500] picpiclink
  2. 2bgw picpicxrefxref
    automatically matched to 2BGW A:160-229
    complexed with mg, so4
    1. region b:160-228 [128502] picpiclink
  3. 2bhn picpicxrefxrefxrefxref
    automatically matched to 2BGW A:160-229
    1. region a:160-229 [128534] picpiclink
  4. 2bhn picpicxrefxrefxrefxref
    automatically matched to 2BGW A:160-229
    1. region b:162-229 [128536] picpiclink
  5. 2bhn picpicxrefxrefxrefxref
    automatically matched to 2BGW A:160-229
    1. region c:164-229 [128538] picpiclink
  6. 2bhn picpicxrefxrefxrefxref
    automatically matched to 2BGW A:160-229
    1. region d:160-229 [128540] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk