Structural Classification of Proteins
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Protein: HIV-1 capsid protein from Human immunodeficiency virus type 1 [TaxId: 11676]

Lineage:

  1. Root: scop
  2. Class: All alpha proteins [46456]
  3. Fold: Retrovirus capsid protein, N-terminal core domain [47942]
    core: 5 helices; bundle
  4. Superfamily: Retrovirus capsid protein, N-terminal core domain [47943]
    link to SUPERFAMILY database - Superfamily
  5. Family: Retrovirus capsid protein, N-terminal core domain [47944]
  6. Protein: HIV-1 capsid protein [47945]
  7. Species: Human immunodeficiency virus type 1 [TaxId: 11676] [47946]

PDB Entry Domains:

  1. 2pxr picpic
    automatically matched to d1l6na2
    complexed with cl, zn
    1. region c:1-145 [149918] picpiclink
  2. 1m9f picpicxref
    mutant
    1. chain c [84900] picpiclink
    2. chain d [84901] picpiclink
  3. 1m9x picpicxref
    mutant
    1. chain c [84907] picpiclink
    2. chain d [84908] picpiclink
    3. chain g [84911] picpiclink
    4. chain h [84912] picpiclink
  4. 1m9e picpicxref
    mutant
    1. chain c [84896] picpiclink
    2. chain d [84897] picpiclink
  5. 1m9d picpicxref
    mutant
    1. chain c [84892] picpiclink
    2. chain d [84893] picpiclink
  6. 1m9y picpicxref
    mutant
    1. chain c [84915] picpiclink
    2. chain d [84916] picpiclink
    3. chain g [84919] picpiclink
    4. chain h [84920] picpiclink
  7. 1m9c picpicxref
    1. chain c [84888] picpiclink
    2. chain d [84889] picpiclink
  8. 2gol picpicxref
    automatically matched to d1l6na2
    complexed with so4
    1. region b:144-278 [135439] picpiclink
  9. 2gol picpicxref
    automatically matched to d1l6na2
    complexed with so4
    1. region d:144-278 [135440] picpiclink
  10. 1ak4 picpicxref
    mutant
    1. chain c [18321] picpiclink
    2. chain d [18322] picpiclink
  11. 1e6j picpicxrefxrefxrefxrefxref
    mutant
    1. region p:11-147 [18323] picpiclink
  12. 2jpr picpic
    automatically matched to d1l6na2
    complexed with jpr
    1. region a:1-145 [148169] picpiclink
  13. 1afv picpicxrefxrefxrefxref
    complexed with pb
    1. chain a [18324] picpiclink
    2. chain b [18325] picpiclink
  14. 1l6n picpicxref
    1. region a:131-289 [73625] picpiclink
  15. 1gwp picpic
    1. chain a [70674] picpiclink
  16. 3dik picpicxref
    automatically matched to d1e6jp2
    1. region a:11-147 [157752] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk