Structural Classification of Proteins
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Protein: HIV-1 matrix protein (HIV-1 MA, HIVp17, p17, MA) from Human immunodeficiency virus type 1 [TaxId: 11676]

Lineage:

  1. Root: scop
  2. Class: All alpha proteins [46456]
  3. Fold: Retroviral matrix proteins [47835]
    4-5 helices; right-handed superhelix
  4. Superfamily: Retroviral matrix proteins [47836]
    the 5th, C-terminal helix is missing in some of the member structures
    link to SUPERFAMILY database - Superfamily
  5. Family: Immunodeficiency virus matrix proteins [47837]
  6. Protein: HIV-1 matrix protein (HIV-1 MA, HIVp17, p17, MA) [47838]
    topologically similar to one subunit in the interferon-gamma intertwined dimer
  7. Species: Human immunodeficiency virus type 1 [TaxId: 11676] [47839]

PDB Entry Domains:

  1. 2gol picpicxrefxref
    automatically matched to d1hiwa_
    complexed with so4
    1. region a:7-107 [135438] picpiclink
  2. 1hiw picpic
    complexed with so4
    1. chain a [18122] picpiclink
    2. chain b [18123] picpiclink
    3. chain c [18124] picpiclink
    4. chain q [18125] picpiclink
    5. chain r [18126] picpiclink
    6. chain s [18127] picpiclink
  3. 2jmg picpic
    automatically matched to d1hiwa_
    complexed with myr; mutant
    1. region a:8-121 [138357] picpiclink
  4. 2h3i picpic
    automatically matched to d1hiwa_
    complexed with myr
    1. region a:7-107 [136045] picpiclink
  5. 2h3q picpic
    automatically matched to d1hiwa_
    complexed with myr, pbu
    1. region a:7-107 [136052] picpiclink
  6. 2h3v picpic
    automatically matched to d1hiwa_
    complexed with pio
    1. region a:7-107 [136057] picpiclink
  7. 2h3f picpic
    automatically matched to d1hiwa_
    1. region a:7-107 [136044] picpiclink
  8. 2h3z picpic
    automatically matched to d1hiwa_
    complexed with pbu
    1. region a:7-107 [136062] picpiclink
  9. 1l6n picpicxref
    1. region a:2-130 [73624] picpiclink
  10. 1uph picpic
    myristoylated protein
    complexed with myr
    1. chain a [99756] picpiclink
  11. 1tam picpic
    1. chain a [18128] picpiclink
  12. 2hmx picpic
    1. chain a [18129] picpiclink

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MRC
site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk