Family: N-acetylmuramoyl-L-alanine amidase-like

Family 2 zinc amidase;

Lineage:

1. Root: scop
2. Class: Alpha and beta proteins (a+b) [53931]
   Mainly antiparallel beta sheets (segregated alpha and beta regions)
3. Fold: N-acetylmuramoyl-L-alanine amidase-like [55845]
   contains mixed beta-sheet
4. Superfamily: N-acetylmuramoyl-L-alanine amidase-like [55846]
   uperfamily
5. Family: N-acetylmuramoyl-L-alanine amidase-like [55847]
   Family 2 zinc amidase;

Protein Domains:

1. AmpD protein [82775]
   1. Citrobacter freundii [TaxId: 546] [82776] (1)
2. Bacteriophage T7 lysozyme (Zn amidase) [55848]
   1. Bacteriophage T7 [TaxId: 10760] [55849] (2)
3. Peptidoglycan recognition protein-lb (Cg14704) [90024]
   1. Fruit fly (Drosophila melanogaster) [TaxId: 7227] [90025] (1)
4. Peptidoglycan-recognition protein-SA (Cg11709) [111139]
   1. Fruit fly (Drosophila melanogaster) [TaxId: 7227] [111140] (2)
      SQ Q9VYX7 37-203 ! SQ Q9VYX7
5. Peptidoglycan recognition protein I-alpha [111141]
   1. Human (Homo sapiens) [TaxId: 9606] [111142] (5)
      SQ Q96LB9 177-341
6. N-acetylmuramoyl-L-alanine amidase PlyG [143780]
   1. Bacillus anthracis [TaxId: 1392] [143781] (6)
      SQ Q81WA9 1-157
      Prophage LambdaBa02
7. Probable N-acetylmuramoyl-L-alanine amidase YbjR, N-terminal domain [143782]
   1. Escherichia coli [TaxId: 562] [143783] (2)
      SQ P75820 22-194
8. Peptidoglycan-recognition protein-LC [143784]
   1. Fruit fly (Drosophila melanogaster) [TaxId: 7227] [143785] (3)
      SQ Q9GNK5 335-499! SQ Q9GNK5 355-520
      Cg4432; different splicing isoforms
9. Peptidoglycan recognition protein, PGRP-S [143786]
   1. Human (Homo sapiens) [TaxId: 9606] [143787] (1)
      SQ O75594 30-196
10. Peptidoglycan-recognition protein-LE [143788]
    1. Fruit fly (Drosophila melanogaster) [TaxId: 7227] [143789] (4)
       SQ Q9VXN9 174-344

Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009 Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk