Structural Classification of Proteins
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Superfamily: N-acetylmuramoyl-L-alanine amidase-like

link to SUPERFAMILY database - Superfamily

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: N-acetylmuramoyl-L-alanine amidase-like [55845]
    contains mixed beta-sheet
  4. Superfamily: N-acetylmuramoyl-L-alanine amidase-like [55846]
    link to SUPERFAMILY database - Superfamily

Families:

  1. N-acetylmuramoyl-L-alanine amidase-like [55847] (10)
    Family 2 zinc amidase;
    1. AmpD protein [82775]
      1. Citrobacter freundii [TaxId: 546] [82776] (1) picpic
    2. Bacteriophage T7 lysozyme (Zn amidase) [55848]
      1. Bacteriophage T7 [TaxId: 10760] [55849] (2) picpic
    3. Peptidoglycan recognition protein-lb (Cg14704) [90024]
      1. Fruit fly (Drosophila melanogaster) [TaxId: 7227] [90025] (1) picpic
    4. Peptidoglycan-recognition protein-SA (Cg11709) [111139]
      1. Fruit fly (Drosophila melanogaster) [TaxId: 7227] [111140] (2) picpic
        SQ Q9VYX7 37-203 ! SQ Q9VYX7
    5. Peptidoglycan recognition protein I-alpha [111141]
      1. Human (Homo sapiens) [TaxId: 9606] [111142] (5) picpic
        SQ Q96LB9 177-341
    6. N-acetylmuramoyl-L-alanine amidase PlyG [143780]
      1. Bacillus anthracis [TaxId: 1392] [143781] (6) picpic
        SQ Q81WA9 1-157
        Prophage LambdaBa02
    7. Probable N-acetylmuramoyl-L-alanine amidase YbjR, N-terminal domain [143782]
      1. Escherichia coli [TaxId: 562] [143783] (2) picpic
        SQ P75820 22-194
    8. Peptidoglycan-recognition protein-LC [143784]
      1. Fruit fly (Drosophila melanogaster) [TaxId: 7227] [143785] (3) picpic
        SQ Q9GNK5 335-499! SQ Q9GNK5 355-520
        Cg4432; different splicing isoforms
    9. Peptidoglycan recognition protein, PGRP-S [143786]
      1. Human (Homo sapiens) [TaxId: 9606] [143787] (1) picpic
        SQ O75594 30-196
    10. Peptidoglycan-recognition protein-LE [143788]
      1. Fruit fly (Drosophila melanogaster) [TaxId: 7227] [143789] (4) picpic
        SQ Q9VXN9 174-344
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk