Structural Classification of Proteins
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Protein: Transcription factor TraR, N-terminal domain from Agrobacterium tumefaciens [TaxId: 358]

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: Profilin-like [55769]
    core: 2 alpha-helices and 5-stranded antiparallel sheet: order 21543; 3 layers: alpha/beta/alpha
  4. Superfamily: Pheromone-binding domain of LuxR-like quorum-sensing transcription factors [75516]
    alpha(2)-beta(2)-alpha(2)-beta(3)-alpha; possibly related to the PAS domain
    link to SUPERFAMILY database - Superfamily
  5. Family: Pheromone-binding domain of LuxR-like quorum-sensing transcription factors [75517]
  6. Protein: Transcription factor TraR, N-terminal domain [75518]
  7. Species: Agrobacterium tumefaciens [TaxId: 358] [75519]

PDB Entry Domains:

  1. 1l3l picpicxref
    complexed with lae, mse
    1. region a:2-169 [73542] picpiclink
    2. region b:2-169 [73544] picpiclink
    3. region c:1-162 [73546] picpiclink
    4. region d:1-162 [73548] picpiclink
  2. 1h0m picpicxref
    complexed with hsl, mse, ooa
    1. region a:1-165 [76443] picpiclink
    2. region b:1-169 [76445] picpiclink
    3. region c:1-164 [76447] picpiclink
    4. region d:2-169 [76449] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk