Structural Classification of Proteins
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Protein: Collagenase-3 (MMP-13) from Human (Homo sapiens) [TaxId: 9606]

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: Zincin-like [55485]
    contains mixed beta sheet with connection over free side of the sheet
  4. Superfamily: Metalloproteases ("zincins"), catalytic domain [55486]
    link to SUPERFAMILY database - Superfamily
  5. Family: Matrix metalloproteases, catalytic domain [55528]
  6. Protein: Collagenase-3 (MMP-13) [55540]
  7. Species: Human (Homo sapiens) [TaxId: 9606] [55541]

PDB Entry Domains:

  1. 1xuc picpic
    automatically matched to d1euba_
    complexed with ca, pb3, zn
    1. region a:104-272 [122332] picpiclink
  2. 1xuc picpic
    automatically matched to d1euba_
    complexed with ca, pb3, zn
    1. region b:104-269 [122333] picpiclink
  3. 2ow9 picpic
    automatically matched to d1euba_
    complexed with ca, hae, so4, sp6, zn
    1. region a:83-249 [139419] picpiclink
  4. 2ow9 picpic
    automatically matched to d1euba_
    complexed with ca, hae, so4, sp6, zn
    1. region b:83-248 [139420] picpiclink
  5. 1xud picpic
    automatically matched to d1euba_
    complexed with ca, pb4, zn
    1. region a:104-272 [122334] picpiclink
  6. 1xud picpic
    automatically matched to d1euba_
    complexed with ca, pb4, zn
    1. region b:104-269 [122335] picpiclink
  7. 830c picpic
    complexed with ca, rs1, zn
    1. chain a [40400] picpiclink
    2. chain b [40401] picpiclink
  8. 1xur picpic
    automatically matched to d1euba_
    complexed with ca, pb5, zn
    1. region a:104-272 [122338] picpiclink
  9. 1xur picpic
    automatically matched to d1euba_
    complexed with ca, pb5, zn
    1. region b:104-269 [122339] picpiclink
  10. 2e2d picpicxref
    automatically matched to d1euba_
    complexed with ca, zn
    1. region a:104-268 [131979] picpiclink
  11. 1ztq picpic
    automatically matched to d1euba_
    complexed with 033, ca, zn
    1. region a:79-243 [125651] picpiclink
  12. 1ztq picpic
    automatically matched to d1euba_
    complexed with 033, ca, zn
    1. region b:79-243 [125652] picpiclink
  13. 1ztq picpic
    automatically matched to d1euba_
    complexed with 033, ca, zn
    1. region c:79-243 [125653] picpiclink
  14. 1ztq picpic
    automatically matched to d1euba_
    complexed with 033, ca, zn
    1. region d:79-243 [125654] picpiclink
  15. 2d1n picpic
    automatically matched to d1euba_
    complexed with ca, fa4, zn
    1. region a:104-269 [131132] picpiclink
  16. 2d1n picpic
    automatically matched to d1euba_
    complexed with ca, fa4, zn
    1. region b:104-269 [131133] picpiclink
  17. 1you picpic
    automatically matched to d1euba_
    complexed with ca, pfd, so4, zn
    1. region a:104-271 [123783] picpiclink
  18. 1you picpic
    automatically matched to d1euba_
    complexed with ca, pfd, so4, zn
    1. region b:104-268 [123784] picpiclink
  19. 2ozr picpic
    automatically matched to d1euba_
    complexed with ca, gg1, hae, zn
    1. region a:83-249 [149119] picpiclink
  20. 2ozr picpic
    automatically matched to d1euba_
    complexed with ca, gg1, hae, zn
    1. region b:83-249 [149120] picpiclink
  21. 2ozr picpic
    automatically matched to d1euba_
    complexed with ca, gg1, hae, zn
    1. region c:83-249 [149121] picpiclink
  22. 2ozr picpic
    automatically matched to d1euba_
    complexed with ca, gg1, hae, zn
    1. region d:84-249 [149122] picpiclink
  23. 2ozr picpic
    automatically matched to d1euba_
    complexed with ca, gg1, hae, zn
    1. region e:83-249 [149123] picpiclink
  24. 2ozr picpic
    automatically matched to d1euba_
    complexed with ca, gg1, hae, zn
    1. region f:83-249 [149124] picpiclink
  25. 2ozr picpic
    automatically matched to d1euba_
    complexed with ca, gg1, hae, zn
    1. region g:83-248 [149125] picpiclink
  26. 2ozr picpic
    automatically matched to d1euba_
    complexed with ca, gg1, hae, zn
    1. region h:83-248 [149126] picpiclink
  27. 456c picpic
    complexed with 345, ca, zn
    1. chain a [40402] picpiclink
    2. chain b [40403] picpiclink
  28. 2pjt picpic
    automatically matched to d1euba_
    complexed with 347, ca, zn
    1. region a:79-243 [149575] picpiclink
  29. 2pjt picpic
    automatically matched to d1euba_
    complexed with 347, ca, zn
    1. region b:79-243 [149576] picpiclink
  30. 2pjt picpic
    automatically matched to d1euba_
    complexed with 347, ca, zn
    1. region c:79-243 [149577] picpiclink
  31. 2pjt picpic
    automatically matched to d1euba_
    complexed with 347, ca, zn
    1. region d:79-243 [149578] picpiclink
  32. 1fm1 picpic
    complexed with ca, way, zn
    1. chain a [59876] picpiclink
  33. 1fls picpic
    complexed with ca, way, zn
    1. chain a [59875] picpiclink
  34. 1eub picpic
    complexed with 3mp, ca, hav, msb, zn
    1. chain a [59503] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk