Structural Classification of Proteins
home mail help root up expand collapse

Family: Viral DNA-binding domain

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: Ferredoxin-like [54861]
    alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2
  4. Superfamily: Viral DNA-binding domain [54957]
    link to SUPERFAMILY database - Superfamily
  5. Family: Viral DNA-binding domain [54958]

Protein Domains:

  1. Papillomavirus-1 E2 protein [54959]
    forms dimers with subunit beta-sheets making (8,12) barrel
    1. Bovine papillomavirus type 1 [TaxId: 10559] [54960] (3) picpic
    2. Human papillomavirus type 31 [TaxId: 10585] [54961] (2) picpic
    3. Human papillomavirus type 16 [TaxId: 333760] [54962] (5) picpic
      SQ P03120 286-365
    4. Human papillomavirus type 18 [TaxId: 333761] [54963] (2) picpic
    5. Human papillomavirus type 6a [TaxId: 37122] [102990] (11) picpic
  2. Epstein barr virus nuclear antigen-1 (ebna1) [54964]
    DNA-binding mode differs from that of E2 protein
    1. Epstein-Barr virus [TaxId: 10376] [54965] (2) picpic
Enter search key:
MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk