Structural Classification of Proteins
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Protein: Papillomavirus-1 E2 protein from Human papillomavirus type 6a [TaxId: 37122]

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: Ferredoxin-like [54861]
    alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2
  4. Superfamily: Viral DNA-binding domain [54957]
    link to SUPERFAMILY database - Superfamily
  5. Family: Viral DNA-binding domain [54958]
  6. Protein: Papillomavirus-1 E2 protein [54959]
    forms dimers with subunit beta-sheets making (8,12) barrel
  7. Species: Human papillomavirus type 6a [TaxId: 37122] [102990]

PDB Entry Domains:

  1. 1r8h picpic
    complexed with po4
    1. chain a [97233] picpiclink
    2. chain b [97234] picpiclink
    3. chain c [97235] picpiclink
    4. chain d [97236] picpiclink
    5. chain e [97237] picpiclink
    6. chain f [97238] picpiclink
  2. 2aye picpic
    automatically matched to d1r8ha_
    complexed with gol, so4
    1. region a:282-366 [127546] picpiclink
  3. 2aye picpic
    automatically matched to d1r8ha_
    complexed with gol, so4
    1. region b:281-366 [127547] picpiclink
  4. 2aye picpic
    automatically matched to d1r8ha_
    complexed with gol, so4
    1. region c:281-366 [127548] picpiclink
  5. 2aye picpic
    automatically matched to d1r8ha_
    complexed with gol, so4
    1. region d:281-366 [127549] picpiclink
  6. 2aye picpic
    automatically matched to d1r8ha_
    complexed with gol, so4
    1. region e:281-366 [127550] picpiclink
  7. 2aye picpic
    automatically matched to d1r8ha_
    complexed with gol, so4
    1. region f:282-366 [127551] picpiclink
  8. 2ayg picpic
    automatically matched to d1r8ha_
    1. region a:281-366 [127552] picpiclink
  9. 2ayg picpic
    automatically matched to d1r8ha_
    1. region b:281-366 [127553] picpiclink
  10. 2ayb picpic
    automatically matched to d1r8ha_
    1. region a:281-366 [127544] picpiclink
  11. 2ayb picpic
    automatically matched to d1r8ha_
    1. region b:281-366 [127545] picpiclink

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MRC
site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk