Structural Classification of Proteins
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Protein: Splicesomal U1A protein from Human (Homo sapiens) [TaxId: 9606]

SQ P09012 1-97 ! SQ P09012 4-98 ! SQ P09012 1-98

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: Ferredoxin-like [54861]
    alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2
  4. Superfamily: RNA-binding domain, RBD [54928]
    link to SUPERFAMILY database - Superfamily
  5. Family: Canonical RBD [54929]
  6. Protein: Splicesomal U1A protein [54932]
    duplication: contains two domains of this fold
  7. Species: Human (Homo sapiens) [TaxId: 9606] [54933]
    SQ P09012 1-97 ! SQ P09012 4-98 ! SQ P09012 1-98

PDB Entry Domains:

  1. 1nu4 picpic
    contains a pre-organized C-terminal helix
    complexed with mg, mla; mutant
    1. chain a [80731] picpiclink
    2. chain b [80732] picpiclink
  2. 1urn picpic
    domain 1
    protein/RNA complex; complexed with cl, gol; mutant
    1. chain a [39153] picpiclink
    2. chain b [39154] picpiclink
    3. chain c [39155] picpiclink
  3. 1m5o picpic
    domain 1, complex with a ribozyme
    complexed with avc, ca; mutant
    1. chain c [78654] picpiclink
    2. chain f [78655] picpiclink
  4. 1sj3 picpic
    complexed with mg; mutant
    1. chain p [105601] picpiclink
  5. 1cx0 picpic
    domain 1, complex with a hepatitis delta virus ribozyme
    complexed with mg; mutant
    1. chain a [39158] picpiclink
  6. 1oia picpic
    1. chain a [87051] picpiclink
    2. chain b [87052] picpiclink
  7. 1m5v picpic
    domain 1, complex with a ribozyme
    complexed with a23, ca, mpd; mutant
    1. chain c [78662] picpiclink
    2. chain f [78663] picpiclink
  8. 1vc7 picpic
    complexed with sr; mutant
    1. chain a [108497] picpiclink
  9. 1drz picpic
    domain 1, complex with a hepatitis delta virus ribozyme
    complexed with mg, so4; mutant
    1. chain a [39159] picpiclink
  10. 1m5k picpic
    domain 1, complex with a hairpin ribozyme
    complexed with ca, ch3, cl, gtp, ido; mutant
    1. chain c [74509] picpiclink
    2. chain f [74510] picpiclink
  11. 1vc0 picpic
    complexed with sr; mutant
    1. chain a [108492] picpiclink
  12. 2nz4 picpic
    automatically matched to d1auda_
    complexed with a2m, glp, gtp, mg; mutant
    1. region a:7-96 [138833] picpiclink
  13. 2nz4 picpic
    automatically matched to d1auda_
    complexed with a2m, glp, gtp, mg; mutant
    1. region b:7-96 [138834] picpiclink
  14. 2nz4 picpic
    automatically matched to d1auda_
    complexed with a2m, glp, gtp, mg; mutant
    1. region c:8-96 [138835] picpiclink
  15. 2nz4 picpic
    automatically matched to d1auda_
    complexed with a2m, glp, gtp, mg; mutant
    1. region d:7-96 [138836] picpiclink
  16. 1sj4 picpic
    mutant
    1. chain p [105602] picpiclink
  17. 1vbx picpic
    mutant
    1. chain a [108489] picpiclink
  18. 2oih picpic
    automatically matched to d1auda_
    complexed with tl; mutant
    1. region a:4-98 [139100] picpiclink
  19. 1m5p picpic
    domain 1, complex with a ribozyme
    complexed with 5cg, ca; mutant
    1. chain c [78656] picpiclink
    2. chain f [78657] picpiclink
  20. 1sjf picpic
    complexed with nco; mutant
    1. chain a [105646] picpiclink
  21. 1vby picpic
    complexed with mn, na; mutant
    1. chain a [108490] picpiclink
  22. 1vc6 picpic
    complexed with mg; mutant
    1. chain a [108496] picpiclink
  23. 1vbz picpic
    complexed with ba; mutant
    1. chain a [108491] picpiclink
  24. 2oj3 picpic
    automatically matched to d1auda_
    complexed with nco, tl; mutant
    1. region a:4-98 [139101] picpiclink
  25. 3cul picpic
    automatically matched to d1auda_
    complexed with gtp, k, mg; mutant
    1. region a:301-392 [156993] picpiclink
  26. 3cul picpic
    automatically matched to d1auda_
    complexed with gtp, k, mg; mutant
    1. region b:401-491 [156994] picpiclink
  27. 3cun picpic
    automatically matched to d1auda_
    complexed with co, gtp, k, mg; mutant
    1. region a:302-392 [156997] picpiclink
  28. 3cun picpic
    automatically matched to d1auda_
    complexed with co, gtp, k, mg; mutant
    1. region b:401-491 [156998] picpiclink
  29. 3bo4 picpic
    automatically matched to d1auda_
    complexed with a23, gtp, k, mg
    1. region a:6-97 [155441] picpiclink
  30. 1u6b picpic
    complexed with 5mu, a23, gtp, k, mg; mutant
    1. chain a [107703] picpiclink
  31. 3bo3 picpic
    automatically matched to d1auda_
    complexed with a23, gtp, k, mg
    1. region a:6-97 [155440] picpiclink
  32. 3bo2 picpic
    automatically matched to d1auda_
    complexed with a23, gtp, mg
    1. region a:6-97 [155439] picpiclink
  33. 1zzn picpic
    automatically matched to d1auda_
    complexed with 5mu, a23, gtp, k, mg; mutant
    1. region a:4-98 [125912] picpiclink
  34. 1vc5 picpic
    complexed with na; mutant
    1. chain a [108495] picpiclink
  35. 1aud picpic
    protein/RNA complex; mutant
    1. chain a [39156] picpiclink
  36. 1dz5 picpic
    domain 1
    protein/RNA complex; mutant
    1. chain a [39162] picpiclink
    2. chain b [39163] picpiclink
  37. 1fht picpic
    domain 1
    1. chain a [39157] picpiclink
  38. 2u1a picpic
    domain 2
    mutant
    1. chain a [39164] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk