Structural Classification of Proteins
home mail help root up expand collapse

Superfamily: Eukaryotic type KH-domain (KH-domain type I)

Prokaryotic and eukaryotic domains share a KH-motif but have different topologies
link to SUPERFAMILY database - Superfamily

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: Eukaryotic type KH-domain (KH-domain type I) [54790]
    beta-alpha(2)-beta(2)-alpha; 2 layers: alpha/beta
  4. Superfamily: Eukaryotic type KH-domain (KH-domain type I) [54791]
    Prokaryotic and eukaryotic domains share a KH-motif but have different topologies
    link to SUPERFAMILY database - Superfamily

Families:

  1. Eukaryotic type KH-domain (KH-domain type I) [54792] (20)
    an RNA-binding domain
    1. Neuro-oncological ventral antigen 1, nova-1, KH3 [54793]
      1. Human (Homo sapiens) [TaxId: 9606] [54794] (1) picpic
    2. Neuro-oncological ventral antigen 2, nova-2, KH3 [54795]
      1. Human (Homo sapiens) [TaxId: 9606] [54796] (2) picpic
    3. Vigilin [54797]
      1. Human (Homo sapiens) [TaxId: 9606] [54798] (8) picpic
    4. Fragile X protein, KH1 [54799]
      1. Human (Homo sapiens) [TaxId: 9606] [54800] (1) picpic
    5. HnRNP K, KH3 [54801]
      1. Human (Homo sapiens) [TaxId: 9606] [54802] (8) picpic
    6. RNA splicing factor 1 [69699]
      1. Human (Homo sapiens) [TaxId: 9606] [69700] (1) picpic
    7. Far upstream binding element, FBP [75418]
      1. Human (Homo sapiens) [TaxId: 9606] [75419] (1) picpic
      2. Mouse (Mus musculus) [TaxId: 10090] [143219] (2) picpic
        SQ Q91WJ8 175-255! SQ Q91WJ8 89-168
    8. Hypothetical protein APE0754 [110927]
      duplication: tandem repeat of two KH-1 domains
      1. Aeropyrum pernix [TaxId: 56636] [110928] (1) picpic
        SQ Q9YE16
    9. Tudor and KH domain containing protein, Tdrkh [117912]
      1. Mouse (Mus musculus) [TaxId: 10090] [117913] (1) picpic
        SQ Q80VL1 118-208
    10. Poly(RC)-binding protein 2 [143220]
      contains three KH domains
      1. Human (Homo sapiens) [TaxId: 9606] [143221] (12) picpic
        SQ Q15366 11-81
    11. Fragile X mental retardation syndrome related protein 1, FXR1 [143222]
      1. Human (Homo sapiens) [TaxId: 9606] [143223] (1) picpic
        SQ P51114 212-289
    12. Poly(RC)-binding protein 1 [143224]
      1. Human (Homo sapiens) [TaxId: 9606] [143225] (1) picpic
        SQ Q15365 279-348
    13. Quaking protein A (Xqua) [143226]
      1. African clawed frog (Xenopus laevis) [TaxId: 8355] [143227] (1) picpic
        SQ Q32NN2 82-215
    14. Ribosomal RNA-processing protein 4, RRP4 [160227]
      1. Human (Homo sapiens) [TaxId: 9606] [160228] (1) picpic
        SQ Q13868 168-293
    15. Exosome complex RNA-binding protein 1, ECR1 [160229]
      1. Archaeoglobus fulgidus [TaxId: 2234] [160230] (3) picpic
        SQ O29758 136-219
      2. Aeropyrum pernix [TaxId: 56636] [160231] (1) picpic
        SQ Q9YC02 148-234
      3. Sulfolobus solfataricus [TaxId: 2287] [160232] (2) picpic
        SQ Q9UXC4 153-221
    16. Ribosomal RNA-processing protein 40, RRP40 [160233]
      1. Saccharomyces cerevisiae [TaxId: 4932] [160234] (1) picpic
        SQ Q08285 152-236
      2. Human (Homo sapiens) [TaxId: 9606] [160235] (1) picpic
        SQ Q9NQT5 196-275
Enter search key:
MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk